EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000006704 (Gene tree)
Gene ID: 111233926
Gene Symbol: LARP4B
Alias: -
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 37113 bases
Position: chrBDQW01000432.1:4086860-4123972
Accession: 111233926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009130	La	PF05383.17	1.2e-13	1	1
ENSSDUP00000009116	La	PF05383.17	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009292	LARP4B-201	2980	XM_022761850	ENSSDUP00000009116	768 (aa)	XP_022617571	UPI000BBF068F
ENSSDUT00000009307	LARP4B-202	2806	-	ENSSDUP00000009130	710 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000006704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006704's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000006704	LARP4B	74	41.398	ENSSDUG00000006655	larp4ab	73	41.278
ENSSDUG00000006704	LARP4B	54	41.798	ENSSDUG00000010621	larp4aa	83	38.014

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006704	LARP4B	100	57.072	ENSG00000107929	LARP4B	100	56.576	Homo_sapiens
ENSSDUG00000006704	LARP4B	100	78.552	ENSAPOG00000020531	LARP4B	95	92.870	Acanthochromis_polyacanthus
ENSSDUG00000006704	LARP4B	91	57.104	ENSAMEG00000001810	LARP4B	100	55.652	Ailuropoda_melanoleuca
ENSSDUG00000006704	LARP4B	98	75.372	ENSAOCG00000007887	-	99	92.870	Amphiprion_ocellaris
ENSSDUG00000006704	LARP4B	92	90.523	ENSAPEG00000002512	LARP4B	96	88.022	Amphiprion_percula
ENSSDUG00000006704	LARP4B	100	90.629	ENSATEG00000012614	LARP4B	100	91.142	Anabas_testudineus
ENSSDUG00000006704	LARP4B	100	60.347	ENSAPLG00000003813	LARP4B	98	59.679	Anas_platyrhynchos
ENSSDUG00000006704	LARP4B	100	61.069	ENSACAG00000002858	LARP4B	100	60.560	Anolis_carolinensis
ENSSDUG00000006704	LARP4B	100	57.072	ENSANAG00000007531	-	100	56.328	Aotus_nancymaae
ENSSDUG00000006704	LARP4B	100	91.911	ENSACLG00000026356	LARP4B	100	91.911	Astatotilapia_calliptera
ENSSDUG00000006704	LARP4B	94	54.094	ENSAMXG00000003335	larp4b	97	53.020	Astyanax_mexicanus
ENSSDUG00000006704	LARP4B	100	57.088	ENSBTAG00000013899	LARP4B	100	56.939	Bos_taurus
ENSSDUG00000006704	LARP4B	100	57.196	ENSCJAG00000018434	LARP4B	100	56.095	Callithrix_jacchus
ENSSDUG00000006704	LARP4B	92	57.951	ENSCAFG00020004209	LARP4B	100	56.149	Canis_lupus_dingo
ENSSDUG00000006704	LARP4B	97	56.000	ENSCHIG00000013543	LARP4B	98	55.729	Capra_hircus
ENSSDUG00000006704	LARP4B	89	62.287	ENSTSYG00000002568	LARP4B	100	61.275	Carlito_syrichta
ENSSDUG00000006704	LARP4B	89	56.414	ENSCAPG00000009725	LARP4B	84	56.164	Cavia_aperea
ENSSDUG00000006704	LARP4B	100	56.716	ENSCPOG00000009375	LARP4B	100	56.554	Cavia_porcellus
ENSSDUG00000006704	LARP4B	100	56.824	ENSCCAG00000024869	LARP4B	100	56.576	Cebus_capucinus
ENSSDUG00000006704	LARP4B	100	57.444	ENSCATG00000019750	LARP4B	100	56.948	Cercocebus_atys
ENSSDUG00000006704	LARP4B	100	57.634	ENSCLAG00000011570	LARP4B	100	57.506	Chinchilla_lanigera
ENSSDUG00000006704	LARP4B	65	78.788	ENSCHOG00000007831	-	60	78.788	Choloepus_hoffmanni
ENSSDUG00000006704	LARP4B	100	61.607	ENSCPBG00000017063	LARP4B	100	60.969	Chrysemys_picta_bellii
ENSSDUG00000006704	LARP4B	100	55.583	ENSCANG00000038021	LARP4B	100	55.087	Colobus_angolensis_palliatus
ENSSDUG00000006704	LARP4B	100	56.025	ENSCGRG00001022930	Larp4b	100	61.214	Cricetulus_griseus_chok1gshd
ENSSDUG00000006704	LARP4B	100	56.025	ENSCGRG00000006022	Larp4b	100	61.214	Cricetulus_griseus_crigri
ENSSDUG00000006704	LARP4B	100	77.051	ENSCSEG00000007342	LARP4B	100	76.356	Cynoglossus_semilaevis
ENSSDUG00000006704	LARP4B	100	86.957	ENSCVAG00000008910	LARP4B	100	87.237	Cyprinodon_variegatus
ENSSDUG00000006704	LARP4B	95	54.305	ENSDARG00000062146	larp4b	94	55.125	Danio_rerio
ENSSDUG00000006704	LARP4B	96	56.407	ENSDNOG00000045543	-	100	62.698	Dasypus_novemcinctus
ENSSDUG00000006704	LARP4B	100	54.591	ENSDORG00000009328	Larp4b	100	59.898	Dipodomys_ordii
ENSSDUG00000006704	LARP4B	88	57.790	ENSETEG00000011249	LARP4B	90	57.790	Echinops_telfairi
ENSSDUG00000006704	LARP4B	96	56.085	ENSEASG00005019068	-	100	55.404	Equus_asinus_asinus
ENSSDUG00000006704	LARP4B	96	56.069	ENSECAG00000024040	LARP4B	100	55.638	Equus_caballus
ENSSDUG00000006704	LARP4B	92	56.005	ENSEEUG00000008391	LARP4B	98	54.523	Erinaceus_europaeus
ENSSDUG00000006704	LARP4B	100	74.401	ENSELUG00000008626	LARP4B	100	73.644	Esox_lucius
ENSSDUG00000006704	LARP4B	88	41.134	ENSELUG00000001417	-	94	42.420	Esox_lucius
ENSSDUG00000006704	LARP4B	100	56.420	ENSFCAG00000000721	-	100	56.629	Felis_catus
ENSSDUG00000006704	LARP4B	100	62.214	ENSFALG00000006961	LARP4B	100	60.875	Ficedula_albicollis
ENSSDUG00000006704	LARP4B	100	57.587	ENSFDAG00000006158	LARP4B	97	57.090	Fukomys_damarensis
ENSSDUG00000006704	LARP4B	100	69.514	ENSFHEG00000013037	LARP4B	100	69.645	Fundulus_heteroclitus
ENSSDUG00000006704	LARP4B	78	69.118	ENSGMOG00000010818	-	92	70.356	Gadus_morhua
ENSSDUG00000006704	LARP4B	100	61.217	ENSGALG00000006672	LARP4B	100	60.583	Gallus_gallus
ENSSDUG00000006704	LARP4B	100	77.928	ENSGACG00000017535	LARP4B	98	79.162	Gasterosteus_aculeatus
ENSSDUG00000006704	LARP4B	94	60.027	ENSGAGG00000008598	LARP4B	100	59.489	Gopherus_agassizii
ENSSDUG00000006704	LARP4B	100	57.072	ENSGGOG00000003572	LARP4B	100	56.576	Gorilla_gorilla
ENSSDUG00000006704	LARP4B	100	93.099	ENSHBUG00000007535	LARP4B	100	93.099	Haplochromis_burtoni
ENSSDUG00000006704	LARP4B	100	57.444	ENSHGLG00000012936	LARP4B	100	63.283	Heterocephalus_glaber_female
ENSSDUG00000006704	LARP4B	100	57.463	ENSHGLG00100016220	-	100	56.965	Heterocephalus_glaber_male
ENSSDUG00000006704	LARP4B	85	51.761	ENSHGLG00100017261	-	100	51.455	Heterocephalus_glaber_male
ENSSDUG00000006704	LARP4B	99	72.490	ENSHCOG00000011581	LARP4B	89	71.939	Hippocampus_comes
ENSSDUG00000006704	LARP4B	94	53.639	ENSIPUG00000009705	larp4b	94	53.547	Ictalurus_punctatus
ENSSDUG00000006704	LARP4B	100	55.074	ENSSTOG00000000587	LARP4B	95	63.497	Ictidomys_tridecemlineatus
ENSSDUG00000006704	LARP4B	100	56.134	ENSJJAG00000020847	Larp4b	100	55.886	Jaculus_jaculus
ENSSDUG00000006704	LARP4B	100	90.495	ENSKMAG00000021674	LARP4B	100	90.495	Kryptolebias_marmoratus
ENSSDUG00000006704	LARP4B	76	93.592	ENSLBEG00000025293	-	82	93.761	Labrus_bergylta
ENSSDUG00000006704	LARP4B	94	58.832	ENSLACG00000009492	LARP4B	100	58.999	Latimeria_chalumnae
ENSSDUG00000006704	LARP4B	100	65.561	ENSLOCG00000012290	larp4b	100	66.119	Lepisosteus_oculatus
ENSSDUG00000006704	LARP4B	100	55.583	ENSLAFG00000015334	LARP4B	100	55.138	Loxodonta_africana
ENSSDUG00000006704	LARP4B	100	57.444	ENSMFAG00000001766	LARP4B	100	55.087	Macaca_fascicularis
ENSSDUG00000006704	LARP4B	100	57.444	ENSMMUG00000005279	LARP4B	100	56.948	Macaca_mulatta
ENSSDUG00000006704	LARP4B	100	57.320	ENSMNEG00000014019	LARP4B	100	54.963	Macaca_nemestrina
ENSSDUG00000006704	LARP4B	100	57.444	ENSMLEG00000035198	LARP4B	100	57.196	Mandrillus_leucophaeus
ENSSDUG00000006704	LARP4B	100	91.602	ENSMAMG00000013742	LARP4B	100	91.731	Mastacembelus_armatus
ENSSDUG00000006704	LARP4B	100	78.333	ENSMZEG00005006498	-	98	94.693	Maylandia_zebra
ENSSDUG00000006704	LARP4B	94	91.840	ENSMZEG00005014594	-	100	91.840	Maylandia_zebra
ENSSDUG00000006704	LARP4B	100	58.685	ENSMGAG00000005472	LARP4B	100	58.065	Meleagris_gallopavo
ENSSDUG00000006704	LARP4B	100	55.432	ENSMAUG00000021657	Larp4b	100	61.889	Mesocricetus_auratus
ENSSDUG00000006704	LARP4B	100	57.388	ENSMICG00000001301	LARP4B	100	56.785	Microcebus_murinus
ENSSDUG00000006704	LARP4B	87	61.889	ENSMOCG00000021452	Larp4b	100	61.551	Microtus_ochrogaster
ENSSDUG00000006704	LARP4B	86	96.552	ENSMMOG00000011253	-	100	76.316	Mola_mola
ENSSDUG00000006704	LARP4B	100	58.134	ENSMODG00000005957	LARP4B	100	57.580	Monodelphis_domestica
ENSSDUG00000006704	LARP4B	100	74.824	ENSMALG00000012432	LARP4B	100	74.824	Monopterus_albus
ENSSDUG00000006704	LARP4B	100	56.663	MGP_CAROLIEiJ_G0018216	Larp4b	100	62.267	Mus_caroli
ENSSDUG00000006704	LARP4B	100	57.143	ENSMUSG00000033499	Larp4b	100	61.618	Mus_musculus
ENSSDUG00000006704	LARP4B	100	56.787	MGP_PahariEiJ_G0019266	Larp4b	100	61.485	Mus_pahari
ENSSDUG00000006704	LARP4B	100	57.019	MGP_SPRETEiJ_G0019074	Larp4b	100	61.790	Mus_spretus
ENSSDUG00000006704	LARP4B	92	57.817	ENSMPUG00000016220	LARP4B	97	56.273	Mustela_putorius_furo
ENSSDUG00000006704	LARP4B	89	57.742	ENSMLUG00000005880	LARP4B	99	55.526	Myotis_lucifugus
ENSSDUG00000006704	LARP4B	100	57.161	ENSNGAG00000001750	Larp4b	100	56.912	Nannospalax_galili
ENSSDUG00000006704	LARP4B	100	72.500	ENSNBRG00000020018	LARP4B	97	75.231	Neolamprologus_brichardi
ENSSDUG00000006704	LARP4B	100	57.196	ENSNLEG00000013442	LARP4B	100	56.700	Nomascus_leucogenys
ENSSDUG00000006704	LARP4B	84	46.388	ENSMEUG00000013114	-	83	46.008	Notamacropus_eugenii
ENSSDUG00000006704	LARP4B	100	53.903	ENSOPRG00000003300	LARP4B	100	53.399	Ochotona_princeps
ENSSDUG00000006704	LARP4B	100	53.234	ENSODEG00000001109	LARP4B	100	52.736	Octodon_degus
ENSSDUG00000006704	LARP4B	100	91.613	ENSONIG00000017705	LARP4B	100	91.613	Oreochromis_niloticus
ENSSDUG00000006704	LARP4B	100	56.704	ENSOANG00000006100	LARP4B	100	56.897	Ornithorhynchus_anatinus
ENSSDUG00000006704	LARP4B	100	54.545	ENSOCUG00000004950	LARP4B	97	54.061	Oryctolagus_cuniculus
ENSSDUG00000006704	LARP4B	100	85.286	ENSORLG00000006080	LARP4B	100	85.286	Oryzias_latipes
ENSSDUG00000006704	LARP4B	100	85.935	ENSORLG00020020940	LARP4B	100	86.076	Oryzias_latipes_hni
ENSSDUG00000006704	LARP4B	100	85.493	ENSORLG00015020608	LARP4B	100	85.493	Oryzias_latipes_hsok
ENSSDUG00000006704	LARP4B	100	85.352	ENSOMEG00000019619	LARP4B	100	85.634	Oryzias_melastigma
ENSSDUG00000006704	LARP4B	96	56.038	ENSOGAG00000011540	LARP4B	99	55.902	Otolemur_garnettii
ENSSDUG00000006704	LARP4B	97	55.784	ENSOARG00000015320	LARP4B	98	54.660	Ovis_aries
ENSSDUG00000006704	LARP4B	100	57.196	ENSPPAG00000039232	LARP4B	100	56.700	Pan_paniscus
ENSSDUG00000006704	LARP4B	100	56.420	ENSPPRG00000009489	LARP4B	100	56.629	Panthera_pardus
ENSSDUG00000006704	LARP4B	100	56.420	ENSPTIG00000008543	LARP4B	100	56.629	Panthera_tigris_altaica
ENSSDUG00000006704	LARP4B	100	57.196	ENSPTRG00000002235	LARP4B	100	56.700	Pan_troglodytes
ENSSDUG00000006704	LARP4B	100	57.444	ENSPANG00000023546	LARP4B	100	55.087	Papio_anubis
ENSSDUG00000006704	LARP4B	99	61.111	ENSPKIG00000012368	LARP4B	98	61.211	Paramormyrops_kingsleyae
ENSSDUG00000006704	LARP4B	72	71.118	ENSPSIG00000005600	LARP4B	99	70.497	Pelodiscus_sinensis
ENSSDUG00000006704	LARP4B	85	76.697	ENSPMGG00000008261	LARP4B	76	76.514	Periophthalmus_magnuspinnatus
ENSSDUG00000006704	LARP4B	100	55.762	ENSPEMG00000014052	Larp4b	100	55.486	Peromyscus_maniculatus_bairdii
ENSSDUG00000006704	LARP4B	100	85.199	ENSPFOG00000000029	LARP4B	100	84.942	Poecilia_formosa
ENSSDUG00000006704	LARP4B	100	85.052	ENSPLAG00000002871	LARP4B	100	85.180	Poecilia_latipinna
ENSSDUG00000006704	LARP4B	100	85.278	ENSPMEG00000016361	LARP4B	100	84.840	Poecilia_mexicana
ENSSDUG00000006704	LARP4B	100	56.753	ENSPPYG00000002035	LARP4B	97	56.258	Pongo_abelii
ENSSDUG00000006704	LARP4B	100	56.180	ENSPCOG00000014688	LARP4B	100	55.930	Propithecus_coquereli
ENSSDUG00000006704	LARP4B	89	56.327	ENSPVAG00000009784	LARP4B	83	56.173	Pteropus_vampyrus
ENSSDUG00000006704	LARP4B	100	92.190	ENSPNYG00000024252	LARP4B	100	92.190	Pundamilia_nyererei
ENSSDUG00000006704	LARP4B	93	54.138	ENSPNAG00000028956	larp4b	96	53.476	Pygocentrus_nattereri
ENSSDUG00000006704	LARP4B	99	56.429	ENSRNOG00000015888	Larp4b	100	55.387	Rattus_norvegicus
ENSSDUG00000006704	LARP4B	100	56.948	ENSRBIG00000033294	LARP4B	100	56.576	Rhinopithecus_bieti
ENSSDUG00000006704	LARP4B	100	57.072	ENSRROG00000033879	LARP4B	100	56.700	Rhinopithecus_roxellana
ENSSDUG00000006704	LARP4B	100	52.239	ENSSBOG00000021109	LARP4B	100	51.617	Saimiri_boliviensis_boliviensis
ENSSDUG00000006704	LARP4B	100	58.906	ENSSHAG00000013392	LARP4B	100	58.629	Sarcophilus_harrisii
ENSSDUG00000006704	LARP4B	94	61.186	ENSSFOG00015003256	LARP4B	93	60.710	Scleropages_formosus
ENSSDUG00000006704	LARP4B	86	100.000	ENSSMAG00000005982	-	100	100.000	Scophthalmus_maximus
ENSSDUG00000006704	LARP4B	100	83.866	ENSSLDG00000020660	LARP4B	97	89.097	Seriola_lalandi_dorsalis
ENSSDUG00000006704	LARP4B	72	85.047	ENSSARG00000001243	-	79	85.047	Sorex_araneus
ENSSDUG00000006704	LARP4B	100	64.503	ENSSPUG00000002102	-	100	63.398	Sphenodon_punctatus
ENSSDUG00000006704	LARP4B	100	60.773	ENSSPUG00000013734	-	100	62.401	Sphenodon_punctatus
ENSSDUG00000006704	LARP4B	91	86.301	ENSSPAG00000014628	LARP4B	92	94.200	Stegastes_partitus
ENSSDUG00000006704	LARP4B	100	55.711	ENSSSCG00000011162	LARP4B	99	60.196	Sus_scrofa
ENSSDUG00000006704	LARP4B	100	60.530	ENSTGUG00000000811	-	100	60.151	Taeniopygia_guttata
ENSSDUG00000006704	LARP4B	99	69.835	ENSTNIG00000007991	LARP4B	99	76.751	Tetraodon_nigroviridis
ENSSDUG00000006704	LARP4B	100	72.010	ENSTNIG00000004571	-	98	72.010	Tetraodon_nigroviridis
ENSSDUG00000006704	LARP4B	79	60.496	ENSTTRG00000011151	LARP4B	86	61.233	Tursiops_truncatus
ENSSDUG00000006704	LARP4B	86	58.466	ENSUAMG00000016461	LARP4B	95	58.177	Ursus_americanus
ENSSDUG00000006704	LARP4B	92	57.430	ENSUMAG00000016127	LARP4B	100	56.273	Ursus_maritimus
ENSSDUG00000006704	LARP4B	92	57.682	ENSVVUG00000008641	LARP4B	100	55.901	Vulpes_vulpes
ENSSDUG00000006704	LARP4B	99	59.566	ENSXETG00000016882	larp4b	100	59.772	Xenopus_tropicalis
ENSSDUG00000006704	LARP4B	100	70.993	ENSXCOG00000019952	LARP4B	100	70.728	Xiphophorus_couchianus
ENSSDUG00000006704	LARP4B	100	84.387	ENSXMAG00000021533	LARP4B	100	83.961	Xiphophorus_maculatus