EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000006705 (Gene tree)
Gene ID: 111218597
Gene Symbol: mrpl30
Alias: zgc:112089
Full Name: mitochondrial ribosomal protein L30
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4647 bases
Position: chrBDQW01000052.1:15507515-15512161
Accession: 111218597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009117	Ribosomal_L30	PF00327.20	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009293	-	3259	XM_022740967	ENSSDUP00000009117	159 (aa)	XP_022596688	UPI000BBE0A65

Gene Model

Click here to download ENSSDUG00000006705's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006705's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006705	mrpl30	100	80.000	ENSAPOG00000005884	mrpl30	100	80.000	Acanthochromis_polyacanthus
ENSSDUG00000006705	mrpl30	100	81.250	ENSACIG00000022360	mrpl30	100	81.250	Amphilophus_citrinellus
ENSSDUG00000006705	mrpl30	100	80.625	ENSAOCG00000002976	mrpl30	100	80.625	Amphiprion_ocellaris
ENSSDUG00000006705	mrpl30	100	80.625	ENSAPEG00000006678	mrpl30	100	80.625	Amphiprion_percula
ENSSDUG00000006705	mrpl30	100	88.125	ENSATEG00000008999	mrpl30	100	88.125	Anabas_testudineus
ENSSDUG00000006705	mrpl30	84	62.963	ENSACAG00000000933	-	94	62.963	Anolis_carolinensis
ENSSDUG00000006705	mrpl30	100	81.250	ENSACLG00000001506	mrpl30	100	81.250	Astatotilapia_calliptera
ENSSDUG00000006705	mrpl30	92	66.438	ENSAMXG00000005341	mrpl30	90	66.438	Astyanax_mexicanus
ENSSDUG00000006705	mrpl30	93	52.027	ENSCAFG00000008574	-	89	52.027	Canis_familiaris
ENSSDUG00000006705	mrpl30	69	64.545	ENSTSYG00000030746	-	81	64.545	Carlito_syrichta
ENSSDUG00000006705	mrpl30	60	48.485	ENSCPBG00000013807	-	83	48.485	Chrysemys_picta_bellii
ENSSDUG00000006705	mrpl30	100	71.698	ENSCSEG00000004238	mrpl30	100	71.698	Cynoglossus_semilaevis
ENSSDUG00000006705	mrpl30	100	78.125	ENSCVAG00000018330	mrpl30	100	78.125	Cyprinodon_variegatus
ENSSDUG00000006705	mrpl30	100	60.000	ENSDARG00000069850	mrpl30	100	60.000	Danio_rerio
ENSSDUG00000006705	mrpl30	97	46.250	ENSEBUG00000013592	mrpl30	90	54.098	Eptatretus_burgeri
ENSSDUG00000006705	mrpl30	91	73.611	ENSELUG00000020222	mrpl30	90	73.611	Esox_lucius
ENSSDUG00000006705	mrpl30	82	55.385	ENSFALG00000003937	-	81	55.385	Ficedula_albicollis
ENSSDUG00000006705	mrpl30	100	75.000	ENSFHEG00000012666	mrpl30	84	75.000	Fundulus_heteroclitus
ENSSDUG00000006705	mrpl30	87	59.712	ENSGALG00000016760	-	85	59.712	Gallus_gallus
ENSSDUG00000006705	mrpl30	100	75.000	ENSGAFG00000021234	mrpl30	100	75.000	Gambusia_affinis
ENSSDUG00000006705	mrpl30	100	80.000	ENSHBUG00000005392	mrpl30	100	80.000	Haplochromis_burtoni
ENSSDUG00000006705	mrpl30	68	64.815	ENSHGLG00000019740	-	75	64.815	Heterocephalus_glaber_female
ENSSDUG00000006705	mrpl30	68	64.815	ENSHGLG00100019694	-	75	64.815	Heterocephalus_glaber_male
ENSSDUG00000006705	mrpl30	96	74.510	ENSHCOG00000003687	mrpl30	94	74.510	Hippocampus_comes
ENSSDUG00000006705	mrpl30	100	58.385	ENSIPUG00000004313	mrpl30	100	58.385	Ictalurus_punctatus
ENSSDUG00000006705	mrpl30	74	61.017	ENSSTOG00000033815	-	88	61.017	Ictidomys_tridecemlineatus
ENSSDUG00000006705	mrpl30	100	83.125	ENSKMAG00000001499	mrpl30	100	83.125	Kryptolebias_marmoratus
ENSSDUG00000006705	mrpl30	84	82.836	ENSLBEG00000027390	-	95	82.836	Labrus_bergylta
ENSSDUG00000006705	mrpl30	100	85.625	ENSLBEG00000018368	mrpl30	100	85.625	Labrus_bergylta
ENSSDUG00000006705	mrpl30	95	50.331	ENSLACG00000012777	mrpl30	94	50.331	Latimeria_chalumnae
ENSSDUG00000006705	mrpl30	100	62.893	ENSLOCG00000001452	mrpl30	98	62.893	Lepisosteus_oculatus
ENSSDUG00000006705	mrpl30	100	88.125	ENSMAMG00000016802	mrpl30	100	88.125	Mastacembelus_armatus
ENSSDUG00000006705	mrpl30	100	81.250	ENSMZEG00005022036	mrpl30	100	81.250	Maylandia_zebra
ENSSDUG00000006705	mrpl30	100	85.000	ENSMMOG00000019827	mrpl30	100	85.000	Mola_mola
ENSSDUG00000006705	mrpl30	92	86.395	ENSMALG00000004911	mrpl30	100	83.125	Monopterus_albus
ENSSDUG00000006705	mrpl30	100	80.000	ENSNBRG00000003924	mrpl30	100	80.000	Neolamprologus_brichardi
ENSSDUG00000006705	mrpl30	74	60.684	ENSMEUG00000010134	-	72	60.684	Notamacropus_eugenii
ENSSDUG00000006705	mrpl30	84	59.398	ENSODEG00000010546	-	98	59.398	Octodon_degus
ENSSDUG00000006705	mrpl30	100	82.500	ENSONIG00000014167	mrpl30	100	82.500	Oreochromis_niloticus
ENSSDUG00000006705	mrpl30	93	79.730	ENSORLG00000025091	mrpl30	82	79.730	Oryzias_latipes
ENSSDUG00000006705	mrpl30	94	81.208	ENSORLG00020011064	mrpl30	97	81.208	Oryzias_latipes_hni
ENSSDUG00000006705	mrpl30	94	81.208	ENSORLG00015014430	mrpl30	97	81.208	Oryzias_latipes_hsok
ENSSDUG00000006705	mrpl30	94	78.667	ENSOMEG00000011587	mrpl30	83	78.667	Oryzias_melastigma
ENSSDUG00000006705	mrpl30	100	57.862	ENSPKIG00000012379	mrpl30	98	57.862	Paramormyrops_kingsleyae
ENSSDUG00000006705	mrpl30	84	54.478	ENSPSIG00000011557	-	95	54.478	Pelodiscus_sinensis
ENSSDUG00000006705	mrpl30	91	69.079	ENSPMGG00000010475	mrpl30	94	69.079	Periophthalmus_magnuspinnatus
ENSSDUG00000006705	mrpl30	72	60.526	ENSPMAG00000004676	mrpl30	71	60.526	Petromyzon_marinus
ENSSDUG00000006705	mrpl30	100	75.000	ENSPFOG00000015775	mrpl30	100	75.000	Poecilia_formosa
ENSSDUG00000006705	mrpl30	100	75.000	ENSPLAG00000021371	mrpl30	100	75.000	Poecilia_latipinna
ENSSDUG00000006705	mrpl30	100	75.000	ENSPMEG00000006243	mrpl30	100	75.000	Poecilia_mexicana
ENSSDUG00000006705	mrpl30	100	73.750	ENSPREG00000008569	mrpl30	100	73.750	Poecilia_reticulata
ENSSDUG00000006705	mrpl30	53	62.353	ENSPCAG00000002174	-	67	62.353	Procavia_capensis
ENSSDUG00000006705	mrpl30	100	80.625	ENSPNYG00000014319	mrpl30	100	80.625	Pundamilia_nyererei
ENSSDUG00000006705	mrpl30	75	70.833	ENSPNAG00000009867	mrpl30	75	70.833	Pygocentrus_nattereri
ENSSDUG00000006705	mrpl30	91	62.500	ENSSFOG00015010917	mrpl30	88	62.500	Scleropages_formosus
ENSSDUG00000006705	mrpl30	100	87.421	ENSSMAG00000019930	mrpl30	100	87.421	Scophthalmus_maximus
ENSSDUG00000006705	mrpl30	100	100.000	ENSSLDG00000005509	mrpl30	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000006705	mrpl30	97	57.419	ENSSPUG00000009351	-	96	57.419	Sphenodon_punctatus
ENSSDUG00000006705	mrpl30	97	48.052	ENSSPUG00000015069	-	97	48.052	Sphenodon_punctatus
ENSSDUG00000006705	mrpl30	100	77.500	ENSSPAG00000020142	mrpl30	100	77.500	Stegastes_partitus
ENSSDUG00000006705	mrpl30	74	56.410	ENSTGUG00000010133	-	100	56.410	Taeniopygia_guttata
ENSSDUG00000006705	mrpl30	99	82.911	ENSTRUG00000022654	mrpl30	99	82.911	Takifugu_rubripes
ENSSDUG00000006705	mrpl30	98	82.692	ENSTNIG00000013872	mrpl30	99	82.692	Tetraodon_nigroviridis
ENSSDUG00000006705	mrpl30	88	54.286	ENSVPAG00000011780	-	95	54.286	Vicugna_pacos
ENSSDUG00000006705	mrpl30	77	57.377	ENSVVUG00000010788	-	82	57.377	Vulpes_vulpes
ENSSDUG00000006705	mrpl30	95	54.967	ENSXETG00000026571	mrpl30	93	54.967	Xenopus_tropicalis
ENSSDUG00000006705	mrpl30	99	74.843	ENSXCOG00000018807	mrpl30	99	74.843	Xiphophorus_couchianus
ENSSDUG00000006705	mrpl30	100	76.250	ENSXMAG00000024725	mrpl30	100	76.250	Xiphophorus_maculatus