EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000006833 (Gene tree)
Gene ID: 111221844
Gene Symbol: tsfm
Alias: zgc:158429
Full Name: Ts translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 2218 bases
Position: chrBDQW01000088.1:14675593-14677810
Accession: 111221844
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009346	EF_TS	PF00889.19	1.3e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009526	-	930	XM_022745428	ENSSDUP00000009346	309 (aa)	XP_022601149	-

Gene Model

Click here to download ENSSDUG00000006833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006833's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006833	tsfm	86	52.222	ENSG00000123297	TSFM	100	57.738	Homo_sapiens
ENSSDUG00000006833	tsfm	100	87.379	ENSAPOG00000014844	tsfm	100	87.379	Acanthochromis_polyacanthus
ENSSDUG00000006833	tsfm	90	53.497	ENSAMEG00000005452	TSFM	90	53.716	Ailuropoda_melanoleuca
ENSSDUG00000006833	tsfm	98	88.449	ENSACIG00000001066	tsfm	98	88.449	Amphilophus_citrinellus
ENSSDUG00000006833	tsfm	100	87.702	ENSAOCG00000007132	tsfm	100	87.702	Amphiprion_ocellaris
ENSSDUG00000006833	tsfm	100	87.379	ENSAPEG00000015755	tsfm	100	87.379	Amphiprion_percula
ENSSDUG00000006833	tsfm	100	86.731	ENSATEG00000001497	tsfm	100	86.731	Anabas_testudineus
ENSSDUG00000006833	tsfm	90	54.737	ENSACAG00000013044	TSFM	87	54.737	Anolis_carolinensis
ENSSDUG00000006833	tsfm	86	53.333	ENSANAG00000038019	TSFM	86	53.571	Aotus_nancymaae
ENSSDUG00000006833	tsfm	100	88.026	ENSACLG00000000139	tsfm	100	88.026	Astatotilapia_calliptera
ENSSDUG00000006833	tsfm	98	69.868	ENSAMXG00000001713	tsfm	98	69.868	Astyanax_mexicanus
ENSSDUG00000006833	tsfm	88	55.036	ENSBTAG00000016912	TSFM	76	53.559	Bos_taurus
ENSSDUG00000006833	tsfm	86	34.932	WBGene00010094	tsfm-1	91	34.932	Caenorhabditis_elegans
ENSSDUG00000006833	tsfm	90	51.930	ENSCJAG00000006600	TSFM	90	52.203	Callithrix_jacchus
ENSSDUG00000006833	tsfm	88	53.737	ENSCAFG00000000293	-	90	53.584	Canis_familiaris
ENSSDUG00000006833	tsfm	88	53.737	ENSCAFG00020022844	TSFM	71	53.584	Canis_lupus_dingo
ENSSDUG00000006833	tsfm	95	52.303	ENSCHIG00000013850	TSFM	95	52.117	Capra_hircus
ENSSDUG00000006833	tsfm	74	52.340	ENSTSYG00000028892	TSFM	90	52.743	Carlito_syrichta
ENSSDUG00000006833	tsfm	61	43.455	ENSCAPG00000007733	-	98	44.279	Cavia_aperea
ENSSDUG00000006833	tsfm	94	51.656	ENSCPOG00000037732	TSFM	97	51.097	Cavia_porcellus
ENSSDUG00000006833	tsfm	90	53.333	ENSCCAG00000033254	TSFM	90	53.559	Cebus_capucinus
ENSSDUG00000006833	tsfm	90	51.579	ENSCATG00000016867	TSFM	90	51.864	Cercocebus_atys
ENSSDUG00000006833	tsfm	86	50.741	ENSCLAG00000009226	TSFM	86	51.071	Chinchilla_lanigera
ENSSDUG00000006833	tsfm	90	51.930	ENSCSAG00000004601	TSFM	90	52.203	Chlorocebus_sabaeus
ENSSDUG00000006833	tsfm	61	57.895	ENSCHOG00000002360	TSFM	76	57.895	Choloepus_hoffmanni
ENSSDUG00000006833	tsfm	91	56.207	ENSCPBG00000018147	TSFM	87	56.207	Chrysemys_picta_bellii
ENSSDUG00000006833	tsfm	86	34.797	ENSCING00000001275	-	88	34.797	Ciona_intestinalis
ENSSDUG00000006833	tsfm	67	33.178	ENSCSAVG00000007722	-	99	33.178	Ciona_savignyi
ENSSDUG00000006833	tsfm	81	49.412	ENSCANG00000030298	TSFM	93	49.811	Colobus_angolensis_palliatus
ENSSDUG00000006833	tsfm	97	51.613	ENSCGRG00001023000	TSFM	97	51.735	Cricetulus_griseus_chok1gshd
ENSSDUG00000006833	tsfm	97	51.613	ENSCGRG00000006566	TSFM	97	51.735	Cricetulus_griseus_crigri
ENSSDUG00000006833	tsfm	100	70.874	ENSCSEG00000003376	tsfm	100	70.874	Cynoglossus_semilaevis
ENSSDUG00000006833	tsfm	99	80.456	ENSCVAG00000001340	tsfm	100	80.456	Cyprinodon_variegatus
ENSSDUG00000006833	tsfm	96	68.350	ENSDARG00000060748	tsfm	97	68.350	Danio_rerio
ENSSDUG00000006833	tsfm	96	49.186	ENSDNOG00000049415	TSFM	97	49.686	Dasypus_novemcinctus
ENSSDUG00000006833	tsfm	76	53.333	ENSDORG00000007272	Tsfm	91	53.333	Dipodomys_ordii
ENSSDUG00000006833	tsfm	91	38.514	FBgn0032646	mEFTs	92	38.514	Drosophila_melanogaster
ENSSDUG00000006833	tsfm	89	51.773	ENSETEG00000002686	-	89	52.069	Echinops_telfairi
ENSSDUG00000006833	tsfm	89	52.837	ENSEASG00005007292	TSFM	71	53.082	Equus_asinus_asinus
ENSSDUG00000006833	tsfm	89	52.837	ENSECAG00000010520	TSFM	79	53.082	Equus_caballus
ENSSDUG00000006833	tsfm	98	76.974	ENSELUG00000015481	tsfm	99	76.974	Esox_lucius
ENSSDUG00000006833	tsfm	90	53.497	ENSFCAG00000023794	TSFM	90	53.716	Felis_catus
ENSSDUG00000006833	tsfm	87	52.920	ENSFDAG00000016548	TSFM	84	52.920	Fukomys_damarensis
ENSSDUG00000006833	tsfm	98	79.934	ENSFHEG00000013458	tsfm	99	79.934	Fundulus_heteroclitus
ENSSDUG00000006833	tsfm	90	75.986	ENSGMOG00000000868	tsfm	97	75.986	Gadus_morhua
ENSSDUG00000006833	tsfm	99	82.410	ENSGAFG00000021764	tsfm	100	82.410	Gambusia_affinis
ENSSDUG00000006833	tsfm	96	82.886	ENSGACG00000000697	tsfm	96	82.886	Gasterosteus_aculeatus
ENSSDUG00000006833	tsfm	91	56.207	ENSGAGG00000020897	TSFM	86	56.207	Gopherus_agassizii
ENSSDUG00000006833	tsfm	90	50.877	ENSGGOG00000001415	TSFM	90	51.186	Gorilla_gorilla
ENSSDUG00000006833	tsfm	100	88.026	ENSHBUG00000021738	tsfm	100	88.026	Haplochromis_burtoni
ENSSDUG00000006833	tsfm	87	52.727	ENSHGLG00000008559	TSFM	85	52.727	Heterocephalus_glaber_female
ENSSDUG00000006833	tsfm	87	52.727	ENSHGLG00100005643	TSFM	85	52.727	Heterocephalus_glaber_male
ENSSDUG00000006833	tsfm	100	80.645	ENSHCOG00000021049	tsfm	100	80.645	Hippocampus_comes
ENSSDUG00000006833	tsfm	90	56.318	ENSIPUG00000019836	tsfm	81	56.318	Ictalurus_punctatus
ENSSDUG00000006833	tsfm	86	52.941	ENSSTOG00000001159	TSFM	94	49.836	Ictidomys_tridecemlineatus
ENSSDUG00000006833	tsfm	98	49.032	ENSJJAG00000012907	Tsfm	96	49.032	Jaculus_jaculus
ENSSDUG00000006833	tsfm	100	82.848	ENSKMAG00000018906	tsfm	100	82.848	Kryptolebias_marmoratus
ENSSDUG00000006833	tsfm	99	85.993	ENSLBEG00000019779	tsfm	99	85.993	Labrus_bergylta
ENSSDUG00000006833	tsfm	94	55.369	ENSLACG00000018125	TSFM	92	55.369	Latimeria_chalumnae
ENSSDUG00000006833	tsfm	98	49.511	ENSLOCG00000006608	tsfm	97	49.511	Lepisosteus_oculatus
ENSSDUG00000006833	tsfm	91	52.941	ENSLAFG00000015177	TSFM	89	52.941	Loxodonta_africana
ENSSDUG00000006833	tsfm	90	51.579	ENSMFAG00000036132	TSFM	90	51.864	Macaca_fascicularis
ENSSDUG00000006833	tsfm	90	51.579	ENSMMUG00000005893	TSFM	90	51.864	Macaca_mulatta
ENSSDUG00000006833	tsfm	90	51.579	ENSMNEG00000026351	TSFM	90	51.864	Macaca_nemestrina
ENSSDUG00000006833	tsfm	90	51.579	ENSMLEG00000029811	TSFM	90	51.864	Mandrillus_leucophaeus
ENSSDUG00000006833	tsfm	100	87.055	ENSMAMG00000002230	tsfm	100	87.055	Mastacembelus_armatus
ENSSDUG00000006833	tsfm	100	88.350	ENSMZEG00005008170	tsfm	100	88.350	Maylandia_zebra
ENSSDUG00000006833	tsfm	99	50.943	ENSMAUG00000011705	Tsfm	98	51.572	Mesocricetus_auratus
ENSSDUG00000006833	tsfm	96	50.649	ENSMICG00000003812	TSFM	97	50.943	Microcebus_murinus
ENSSDUG00000006833	tsfm	97	51.780	ENSMOCG00000006104	Tsfm	96	52.090	Microtus_ochrogaster
ENSSDUG00000006833	tsfm	99	85.668	ENSMMOG00000021854	tsfm	99	85.668	Mola_mola
ENSSDUG00000006833	tsfm	87	52.727	ENSMODG00000021351	TSFM	83	52.727	Monodelphis_domestica
ENSSDUG00000006833	tsfm	100	88.673	ENSMALG00000015046	tsfm	100	88.673	Monopterus_albus
ENSSDUG00000006833	tsfm	97	52.090	MGP_CAROLIEiJ_G0015873	Tsfm	96	54.054	Mus_caroli
ENSSDUG00000006833	tsfm	97	52.412	ENSMUSG00000040521	Tsfm	96	54.595	Mus_musculus
ENSSDUG00000006833	tsfm	97	52.733	MGP_PahariEiJ_G0031212	Tsfm	96	55.135	Mus_pahari
ENSSDUG00000006833	tsfm	97	52.090	MGP_SPRETEiJ_G0016699	Tsfm	96	54.595	Mus_spretus
ENSSDUG00000006833	tsfm	90	53.497	ENSMPUG00000002051	TSFM	90	53.716	Mustela_putorius_furo
ENSSDUG00000006833	tsfm	89	53.025	ENSMLUG00000005940	TSFM	98	50.794	Myotis_lucifugus
ENSSDUG00000006833	tsfm	86	53.506	ENSNGAG00000014356	Tsfm	84	53.114	Nannospalax_galili
ENSSDUG00000006833	tsfm	100	87.702	ENSNBRG00000016413	tsfm	100	87.702	Neolamprologus_brichardi
ENSSDUG00000006833	tsfm	90	51.228	ENSNLEG00000017178	TSFM	90	51.525	Nomascus_leucogenys
ENSSDUG00000006833	tsfm	66	67.532	ENSMEUG00000004047	TSFM	61	67.532	Notamacropus_eugenii
ENSSDUG00000006833	tsfm	97	46.131	ENSOPRG00000006670	TSFM	98	46.450	Ochotona_princeps
ENSSDUG00000006833	tsfm	97	51.935	ENSODEG00000001882	TSFM	96	52.090	Octodon_degus
ENSSDUG00000006833	tsfm	100	80.968	ENSONIG00000019100	tsfm	99	80.968	Oreochromis_niloticus
ENSSDUG00000006833	tsfm	84	49.827	ENSOCUG00000012512	TSFM	74	47.284	Oryctolagus_cuniculus
ENSSDUG00000006833	tsfm	97	79.402	ENSORLG00000030201	tsfm	97	79.402	Oryzias_latipes
ENSSDUG00000006833	tsfm	92	83.099	ENSORLG00020004740	tsfm	97	79.734	Oryzias_latipes_hni
ENSSDUG00000006833	tsfm	92	82.042	ENSORLG00015022703	tsfm	97	78.738	Oryzias_latipes_hsok
ENSSDUG00000006833	tsfm	99	78.964	ENSOMEG00000008934	tsfm	98	78.964	Oryzias_melastigma
ENSSDUG00000006833	tsfm	96	50.485	ENSOGAG00000012235	TSFM	94	50.485	Otolemur_garnettii
ENSSDUG00000006833	tsfm	95	52.632	ENSOARG00000005095	TSFM	86	53.559	Ovis_aries
ENSSDUG00000006833	tsfm	90	50.526	ENSPPAG00000043428	TSFM	90	50.847	Pan_paniscus
ENSSDUG00000006833	tsfm	90	53.497	ENSPPRG00000009667	TSFM	90	53.716	Panthera_pardus
ENSSDUG00000006833	tsfm	90	53.497	ENSPTIG00000015290	TSFM	97	51.258	Panthera_tigris_altaica
ENSSDUG00000006833	tsfm	90	50.526	ENSPTRG00000005152	TSFM	90	50.847	Pan_troglodytes
ENSSDUG00000006833	tsfm	90	51.579	ENSPANG00000007866	TSFM	90	51.864	Papio_anubis
ENSSDUG00000006833	tsfm	98	64.570	ENSPKIG00000008495	tsfm	94	64.570	Paramormyrops_kingsleyae
ENSSDUG00000006833	tsfm	63	50.246	ENSPSIG00000015776	TSFM	93	50.246	Pelodiscus_sinensis
ENSSDUG00000006833	tsfm	99	74.267	ENSPMGG00000007022	tsfm	99	74.267	Periophthalmus_magnuspinnatus
ENSSDUG00000006833	tsfm	97	50.000	ENSPEMG00000000414	Tsfm	96	50.804	Peromyscus_maniculatus_bairdii
ENSSDUG00000006833	tsfm	94	50.489	ENSPCIG00000023619	TSFM	97	50.489	Phascolarctos_cinereus
ENSSDUG00000006833	tsfm	99	80.456	ENSPFOG00000010782	tsfm	100	80.456	Poecilia_formosa
ENSSDUG00000006833	tsfm	99	79.153	ENSPLAG00000008105	tsfm	100	79.153	Poecilia_latipinna
ENSSDUG00000006833	tsfm	99	80.782	ENSPMEG00000002567	tsfm	100	80.782	Poecilia_mexicana
ENSSDUG00000006833	tsfm	99	80.456	ENSPREG00000016696	tsfm	100	80.456	Poecilia_reticulata
ENSSDUG00000006833	tsfm	90	51.579	ENSPPYG00000004708	TSFM	77	51.864	Pongo_abelii
ENSSDUG00000006833	tsfm	91	50.502	ENSPCAG00000003789	TSFM	89	50.667	Procavia_capensis
ENSSDUG00000006833	tsfm	89	52.482	ENSPCOG00000021606	TSFM	97	50.943	Propithecus_coquereli
ENSSDUG00000006833	tsfm	90	52.797	ENSPVAG00000012141	TSFM	97	51.724	Pteropus_vampyrus
ENSSDUG00000006833	tsfm	100	88.350	ENSPNYG00000001230	tsfm	100	88.350	Pundamilia_nyererei
ENSSDUG00000006833	tsfm	100	67.638	ENSPNAG00000003241	tsfm	100	67.638	Pygocentrus_nattereri
ENSSDUG00000006833	tsfm	95	48.013	ENSRNOG00000048843	Tsfm	94	48.675	Rattus_norvegicus
ENSSDUG00000006833	tsfm	90	51.579	ENSRBIG00000037278	TSFM	90	51.864	Rhinopithecus_bieti
ENSSDUG00000006833	tsfm	90	51.579	ENSRROG00000031769	TSFM	90	51.864	Rhinopithecus_roxellana
ENSSDUG00000006833	tsfm	90	45.965	ENSSBOG00000021465	TSFM	90	46.441	Saimiri_boliviensis_boliviensis
ENSSDUG00000006833	tsfm	88	54.710	ENSSHAG00000009664	TSFM	81	54.710	Sarcophilus_harrisii
ENSSDUG00000006833	tsfm	98	67.434	ENSSFOG00015014457	tsfm	98	67.434	Scleropages_formosus
ENSSDUG00000006833	tsfm	100	89.968	ENSSMAG00000002467	tsfm	100	89.968	Scophthalmus_maximus
ENSSDUG00000006833	tsfm	100	97.411	ENSSLDG00000000715	tsfm	99	97.411	Seriola_lalandi_dorsalis
ENSSDUG00000006833	tsfm	60	52.632	ENSSARG00000000785	-	63	52.632	Sorex_araneus
ENSSDUG00000006833	tsfm	85	52.222	ENSSPUG00000006435	TSFM	97	52.222	Sphenodon_punctatus
ENSSDUG00000006833	tsfm	100	85.113	ENSSPAG00000002548	tsfm	100	85.113	Stegastes_partitus
ENSSDUG00000006833	tsfm	91	53.310	ENSSSCG00000037767	TSFM	75	53.633	Sus_scrofa
ENSSDUG00000006833	tsfm	99	79.479	ENSTRUG00000003081	tsfm	99	79.479	Takifugu_rubripes
ENSSDUG00000006833	tsfm	99	79.805	ENSTNIG00000014578	tsfm	99	79.805	Tetraodon_nigroviridis
ENSSDUG00000006833	tsfm	97	41.768	ENSTBEG00000011603	TSFM	96	42.121	Tupaia_belangeri
ENSSDUG00000006833	tsfm	91	53.103	ENSTTRG00000008351	TSFM	88	53.103	Tursiops_truncatus
ENSSDUG00000006833	tsfm	90	53.846	ENSUAMG00000013142	TSFM	90	54.054	Ursus_americanus
ENSSDUG00000006833	tsfm	90	53.846	ENSUMAG00000020123	TSFM	90	54.054	Ursus_maritimus
ENSSDUG00000006833	tsfm	69	59.783	ENSVPAG00000000209	TSFM	67	59.783	Vicugna_pacos
ENSSDUG00000006833	tsfm	85	53.903	ENSVVUG00000016735	TSFM	88	54.348	Vulpes_vulpes
ENSSDUG00000006833	tsfm	92	54.483	ENSXETG00000009653	tsfm	99	54.483	Xenopus_tropicalis
ENSSDUG00000006833	tsfm	99	82.085	ENSXMAG00000018468	tsfm	100	82.085	Xiphophorus_maculatus