EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000006834 (Gene tree)
Gene ID: 111237860
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7805 bases
Position: chrBDQW01001124.1:1072116-1079920
Accession: 111237860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009305	MA3	PF02847.17	7.4e-22	1	1
ENSSDUP00000009305	MIF4G	PF02854.19	1.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009485	-	3442	XM_022767148	ENSSDUP00000009305	845 (aa)	XP_022622869	UPI000BBF1D59

Gene Model

Click here to download ENSSDUG00000006834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006834's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006834	nom1	97	54.306	ENSG00000146909	NOM1	80	59.833	Homo_sapiens
ENSSDUG00000006834	nom1	64	91.095	ENSAPOG00000012073	nom1	98	80.664	Acanthochromis_polyacanthus
ENSSDUG00000006834	nom1	81	58.177	ENSAMEG00000001412	NOM1	96	58.309	Ailuropoda_melanoleuca
ENSSDUG00000006834	nom1	89	90.076	ENSACIG00000018050	nom1	97	90.076	Amphilophus_citrinellus
ENSSDUG00000006834	nom1	64	90.892	ENSAOCG00000006229	nom1	98	80.691	Amphiprion_ocellaris
ENSSDUG00000006834	nom1	64	90.892	ENSAPEG00000015994	nom1	98	79.412	Amphiprion_percula
ENSSDUG00000006834	nom1	66	88.689	ENSATEG00000005405	nom1	98	80.505	Anabas_testudineus
ENSSDUG00000006834	nom1	78	59.520	ENSAPLG00000006585	NOM1	80	68.182	Anas_platyrhynchos
ENSSDUG00000006834	nom1	100	77.032	ENSACLG00000000033	nom1	98	78.417	Astatotilapia_calliptera
ENSSDUG00000006834	nom1	63	75.465	ENSAMXG00000041486	nom1	63	74.908	Astyanax_mexicanus
ENSSDUG00000006834	nom1	97	51.371	ENSBTAG00000016435	NOM1	63	65.257	Bos_taurus
ENSSDUG00000006834	nom1	98	54.643	ENSCJAG00000004336	NOM1	61	68.302	Callithrix_jacchus
ENSSDUG00000006834	nom1	97	50.937	ENSCAFG00020005121	NOM1	95	52.195	Canis_lupus_dingo
ENSSDUG00000006834	nom1	81	58.037	ENSCHIG00000020102	NOM1	64	65.441	Capra_hircus
ENSSDUG00000006834	nom1	97	54.447	ENSTSYG00000000227	NOM1	64	68.105	Carlito_syrichta
ENSSDUG00000006834	nom1	61	70.250	ENSCAPG00000016273	NOM1	99	70.250	Cavia_aperea
ENSSDUG00000006834	nom1	98	52.262	ENSCPOG00000025538	NOM1	61	64.906	Cavia_porcellus
ENSSDUG00000006834	nom1	89	70.000	ENSCCAG00000014944	NOM1	99	69.034	Cebus_capucinus
ENSSDUG00000006834	nom1	81	60.058	ENSCLAG00000000267	NOM1	62	68.113	Chinchilla_lanigera
ENSSDUG00000006834	nom1	69	68.352	ENSCPBG00000018215	NOM1	72	68.352	Chrysemys_picta_bellii
ENSSDUG00000006834	nom1	82	37.465	ENSCING00000005248	-	67	41.633	Ciona_intestinalis
ENSSDUG00000006834	nom1	63	67.652	ENSCANG00000041984	NOM1	92	67.904	Colobus_angolensis_palliatus
ENSSDUG00000006834	nom1	97	53.061	ENSCGRG00001020293	Nom1	96	53.413	Cricetulus_griseus_chok1gshd
ENSSDUG00000006834	nom1	61	68.786	ENSCGRG00000005405	Nom1	97	68.786	Cricetulus_griseus_crigri
ENSSDUG00000006834	nom1	94	72.716	ENSCSEG00000000932	nom1	61	85.312	Cynoglossus_semilaevis
ENSSDUG00000006834	nom1	100	72.897	ENSCVAG00000007562	nom1	100	72.358	Cyprinodon_variegatus
ENSSDUG00000006834	nom1	62	76.136	ENSDARG00000060027	nom1	100	76.181	Danio_rerio
ENSSDUG00000006834	nom1	63	58.022	ENSDORG00000015682	Nom1	78	57.380	Dipodomys_ordii
ENSSDUG00000006834	nom1	59	38.760	FBgn0035336	CG9004	60	38.760	Drosophila_melanogaster
ENSSDUG00000006834	nom1	73	58.768	ENSETEG00000003104	NOM1	88	58.768	Echinops_telfairi
ENSSDUG00000006834	nom1	51	51.376	ENSEBUG00000010077	nom1	96	51.376	Eptatretus_burgeri
ENSSDUG00000006834	nom1	81	60.522	ENSEASG00005001489	NOM1	95	54.460	Equus_asinus_asinus
ENSSDUG00000006834	nom1	68	64.706	ENSECAG00000007596	NOM1	89	54.299	Equus_caballus
ENSSDUG00000006834	nom1	65	80.292	ENSELUG00000006266	nom1	98	70.588	Esox_lucius
ENSSDUG00000006834	nom1	82	58.705	ENSFCAG00000006467	NOM1	65	66.605	Felis_catus
ENSSDUG00000006834	nom1	81	59.366	ENSFALG00000006904	NOM1	78	67.831	Ficedula_albicollis
ENSSDUG00000006834	nom1	98	52.123	ENSFDAG00000016241	NOM1	65	65.730	Fukomys_damarensis
ENSSDUG00000006834	nom1	98	73.381	ENSFHEG00000015974	nom1	64	85.389	Fundulus_heteroclitus
ENSSDUG00000006834	nom1	94	63.041	ENSGMOG00000005129	nom1	100	61.928	Gadus_morhua
ENSSDUG00000006834	nom1	80	57.759	ENSGALG00000006437	NOM1	62	66.543	Gallus_gallus
ENSSDUG00000006834	nom1	100	74.235	ENSGAFG00000003211	nom1	100	73.857	Gambusia_affinis
ENSSDUG00000006834	nom1	82	58.898	ENSGAGG00000014347	NOM1	64	68.750	Gopherus_agassizii
ENSSDUG00000006834	nom1	98	53.452	ENSGGOG00000010920	NOM1	58	67.463	Gorilla_gorilla
ENSSDUG00000006834	nom1	100	76.842	ENSHBUG00000014616	nom1	98	77.764	Haplochromis_burtoni
ENSSDUG00000006834	nom1	98	54.060	ENSHGLG00000007392	NOM1	62	68.668	Heterocephalus_glaber_female
ENSSDUG00000006834	nom1	86	70.382	ENSHGLG00100014407	NOM1	62	68.668	Heterocephalus_glaber_male
ENSSDUG00000006834	nom1	62	72.968	ENSIPUG00000013980	nom1	98	60.357	Ictalurus_punctatus
ENSSDUG00000006834	nom1	65	67.395	ENSSTOG00000031736	NOM1	93	68.856	Ictidomys_tridecemlineatus
ENSSDUG00000006834	nom1	58	71.253	ENSJJAG00000011716	Nom1	98	71.253	Jaculus_jaculus
ENSSDUG00000006834	nom1	100	77.304	ENSLBEG00000009252	nom1	100	77.906	Labrus_bergylta
ENSSDUG00000006834	nom1	83	63.016	ENSLACG00000011777	NOM1	64	70.998	Latimeria_chalumnae
ENSSDUG00000006834	nom1	98	63.033	ENSLOCG00000012452	nom1	66	76.360	Lepisosteus_oculatus
ENSSDUG00000006834	nom1	97	52.056	ENSMMUG00000039033	NOM1	79	57.486	Macaca_mulatta
ENSSDUG00000006834	nom1	62	68.809	ENSMLEG00000037062	NOM1	99	69.070	Mandrillus_leucophaeus
ENSSDUG00000006834	nom1	98	79.738	ENSMAMG00000004118	nom1	64	88.290	Mastacembelus_armatus
ENSSDUG00000006834	nom1	100	76.914	ENSMZEG00005000384	nom1	98	78.297	Maylandia_zebra
ENSSDUG00000006834	nom1	82	58.499	ENSMGAG00000005051	NOM1	77	67.424	Meleagris_gallopavo
ENSSDUG00000006834	nom1	97	54.251	ENSMAUG00000017988	Nom1	95	53.763	Mesocricetus_auratus
ENSSDUG00000006834	nom1	64	65.441	ENSMICG00000017531	NOM1	96	53.245	Microcebus_murinus
ENSSDUG00000006834	nom1	98	53.690	ENSMOCG00000015962	Nom1	95	53.690	Microtus_ochrogaster
ENSSDUG00000006834	nom1	99	72.929	ENSMMOG00000004419	nom1	98	72.019	Mola_mola
ENSSDUG00000006834	nom1	99	54.138	ENSMODG00000005177	NOM1	86	58.366	Monodelphis_domestica
ENSSDUG00000006834	nom1	93	79.008	ENSMALG00000008800	nom1	98	78.217	Monopterus_albus
ENSSDUG00000006834	nom1	97	52.821	MGP_CAROLIEiJ_G0027043	Nom1	94	53.469	Mus_caroli
ENSSDUG00000006834	nom1	97	53.541	ENSMUSG00000001569	Nom1	94	53.333	Mus_musculus
ENSSDUG00000006834	nom1	97	52.688	MGP_SPRETEiJ_G0028039	Nom1	94	52.600	Mus_spretus
ENSSDUG00000006834	nom1	81	56.214	ENSMPUG00000009745	NOM1	78	63.383	Mustela_putorius_furo
ENSSDUG00000006834	nom1	69	63.529	ENSMLUG00000009129	NOM1	89	67.532	Myotis_lucifugus
ENSSDUG00000006834	nom1	100	77.076	ENSNBRG00000016429	nom1	95	87.902	Neolamprologus_brichardi
ENSSDUG00000006834	nom1	97	53.397	ENSNLEG00000000238	NOM1	80	58.982	Nomascus_leucogenys
ENSSDUG00000006834	nom1	69	56.977	ENSMEUG00000001108	NOM1	52	75.486	Notamacropus_eugenii
ENSSDUG00000006834	nom1	51	59.532	ENSOPRG00000014676	NOM1	51	58.940	Ochotona_princeps
ENSSDUG00000006834	nom1	81	58.213	ENSODEG00000009399	NOM1	76	66.041	Octodon_degus
ENSSDUG00000006834	nom1	94	78.947	ENSONIG00000005958	nom1	100	79.599	Oreochromis_niloticus
ENSSDUG00000006834	nom1	55	69.414	ENSOANG00000006139	-	97	69.414	Ornithorhynchus_anatinus
ENSSDUG00000006834	nom1	93	46.250	ENSOCUG00000021448	-	87	55.701	Oryctolagus_cuniculus
ENSSDUG00000006834	nom1	97	55.251	ENSOCUG00000004071	-	95	54.881	Oryctolagus_cuniculus
ENSSDUG00000006834	nom1	100	74.323	ENSORLG00000010541	nom1	98	70.602	Oryzias_latipes
ENSSDUG00000006834	nom1	93	73.004	ENSORLG00020010789	nom1	99	70.741	Oryzias_latipes_hni
ENSSDUG00000006834	nom1	100	73.474	ENSORLG00015010475	nom1	100	72.919	Oryzias_latipes_hsok
ENSSDUG00000006834	nom1	100	74.205	ENSOMEG00000004219	nom1	98	74.582	Oryzias_melastigma
ENSSDUG00000006834	nom1	69	64.358	ENSOGAG00000001124	NOM1	88	68.470	Otolemur_garnettii
ENSSDUG00000006834	nom1	81	57.895	ENSOARG00000007261	NOM1	73	65.441	Ovis_aries
ENSSDUG00000006834	nom1	81	60.342	ENSPPAG00000041374	NOM1	80	59.693	Pan_paniscus
ENSSDUG00000006834	nom1	82	57.759	ENSPTIG00000013532	NOM1	73	66.296	Panthera_tigris_altaica
ENSSDUG00000006834	nom1	81	59.571	ENSPTRG00000019917	NOM1	80	59.693	Pan_troglodytes
ENSSDUG00000006834	nom1	97	54.664	ENSPANG00000007605	NOM1	80	61.461	Papio_anubis
ENSSDUG00000006834	nom1	100	60.993	ENSPKIG00000005825	nom1	65	71.349	Paramormyrops_kingsleyae
ENSSDUG00000006834	nom1	64	67.514	ENSPSIG00000017848	NOM1	90	67.890	Pelodiscus_sinensis
ENSSDUG00000006834	nom1	98	73.261	ENSPMGG00000002577	nom1	66	87.079	Periophthalmus_magnuspinnatus
ENSSDUG00000006834	nom1	97	54.869	ENSPEMG00000024180	Nom1	95	54.340	Peromyscus_maniculatus_bairdii
ENSSDUG00000006834	nom1	64	68.440	ENSPCIG00000027941	NOM1	59	69.549	Phascolarctos_cinereus
ENSSDUG00000006834	nom1	100	74.618	ENSPFOG00000015771	nom1	99	75.090	Poecilia_formosa
ENSSDUG00000006834	nom1	63	85.794	ENSPLAG00000007856	nom1	99	72.189	Poecilia_latipinna
ENSSDUG00000006834	nom1	100	74.853	ENSPMEG00000014155	nom1	99	75.090	Poecilia_mexicana
ENSSDUG00000006834	nom1	100	74.323	ENSPREG00000008850	nom1	100	73.740	Poecilia_reticulata
ENSSDUG00000006834	nom1	98	51.297	ENSPPYG00000018222	NOM1	79	56.312	Pongo_abelii
ENSSDUG00000006834	nom1	73	63.488	ENSPCAG00000000440	NOM1	68	63.488	Procavia_capensis
ENSSDUG00000006834	nom1	62	66.541	ENSPCOG00000015222	NOM1	99	66.793	Propithecus_coquereli
ENSSDUG00000006834	nom1	97	51.821	ENSPVAG00000014760	NOM1	63	65.074	Pteropus_vampyrus
ENSSDUG00000006834	nom1	100	76.796	ENSPNYG00000006975	nom1	97	85.900	Pundamilia_nyererei
ENSSDUG00000006834	nom1	65	73.406	ENSPNAG00000011085	nom1	59	75.000	Pygocentrus_nattereri
ENSSDUG00000006834	nom1	97	51.617	ENSRNOG00000048969	AABR07059041.1	64	64.547	Rattus_norvegicus
ENSSDUG00000006834	nom1	98	54.673	ENSRBIG00000037042	NOM1	95	54.664	Rhinopithecus_bieti
ENSSDUG00000006834	nom1	98	54.439	ENSRROG00000037293	NOM1	95	54.427	Rhinopithecus_roxellana
ENSSDUG00000006834	nom1	81	59.339	ENSSHAG00000017998	-	99	59.490	Sarcophilus_harrisii
ENSSDUG00000006834	nom1	58	74.743	ENSSFOG00015003196	nom1	100	74.743	Scleropages_formosus
ENSSDUG00000006834	nom1	100	82.290	ENSSMAG00000011047	nom1	98	82.091	Scophthalmus_maximus
ENSSDUG00000006834	nom1	100	97.988	ENSSLDG00000021812	nom1	100	97.988	Seriola_lalandi_dorsalis
ENSSDUG00000006834	nom1	82	49.321	ENSSPUG00000002556	NOM1	90	70.000	Sphenodon_punctatus
ENSSDUG00000006834	nom1	64	91.160	ENSSPAG00000000953	nom1	100	79.086	Stegastes_partitus
ENSSDUG00000006834	nom1	81	58.900	ENSTGUG00000000702	-	77	66.728	Taeniopygia_guttata
ENSSDUG00000006834	nom1	98	72.024	ENSTRUG00000010239	nom1	98	72.934	Takifugu_rubripes
ENSSDUG00000006834	nom1	98	70.277	ENSTNIG00000012783	nom1	68	82.552	Tetraodon_nigroviridis
ENSSDUG00000006834	nom1	96	52.794	ENSTTRG00000009691	NOM1	87	55.699	Tursiops_truncatus
ENSSDUG00000006834	nom1	81	58.466	ENSUAMG00000025450	NOM1	95	52.556	Ursus_americanus
ENSSDUG00000006834	nom1	82	58.129	ENSUMAG00000014275	NOM1	96	57.368	Ursus_maritimus
ENSSDUG00000006834	nom1	74	68.664	ENSVVUG00000002608	NOM1	95	68.664	Vulpes_vulpes
ENSSDUG00000006834	nom1	83	57.639	ENSXETG00000021611	nom1	82	76.098	Xenopus_tropicalis
ENSSDUG00000006834	nom1	98	74.880	ENSXMAG00000002451	nom1	98	74.017	Xiphophorus_maculatus