EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000006856 (Gene tree)
Gene ID: 111236827
Gene Symbol: rbm12b
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 1965 bases
Position: chrBDQW01000723.1:315639-317603
Accession: 111236827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009320	RRM_1	PF00076.22	9e-32	1	3
ENSSDUP00000009320	RRM_1	PF00076.22	9e-32	2	3
ENSSDUP00000009320	RRM_1	PF00076.22	9e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009500	-	1965	XM_022765691	ENSSDUP00000009320	654 (aa)	XP_022621412	UPI000BBED41E

Gene Model

Click here to download ENSSDUG00000006856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006856's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000006856	rbm12b	74	30.528	ENSSDUG00000012545	zgc:153215	98	30.291

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006856	rbm12b	86	48.052	ENSG00000183808	RBM12B	99	78.750	Homo_sapiens
ENSSDUG00000006856	rbm12b	100	70.183	ENSAPOG00000013963	rbm12b	100	70.183	Acanthochromis_polyacanthus
ENSSDUG00000006856	rbm12b	86	46.753	ENSAMEG00000007134	RBM12B	66	46.753	Ailuropoda_melanoleuca
ENSSDUG00000006856	rbm12b	86	65.996	ENSACIG00000014943	rbm12b	97	70.432	Amphilophus_citrinellus
ENSSDUG00000006856	rbm12b	100	71.254	ENSAOCG00000024270	rbm12b	100	71.407	Amphiprion_ocellaris
ENSSDUG00000006856	rbm12b	98	47.082	ENSAPEG00000022079	rbm12b	99	70.164	Amphiprion_percula
ENSSDUG00000006856	rbm12b	100	73.242	ENSATEG00000004578	rbm12b	97	73.242	Anabas_testudineus
ENSSDUG00000006856	rbm12b	74	51.852	ENSATEG00000001886	zgc:153215	76	51.190	Anabas_testudineus
ENSSDUG00000006856	rbm12b	99	40.725	ENSAPLG00000002020	RBM12B	99	41.913	Anas_platyrhynchos
ENSSDUG00000006856	rbm12b	92	46.753	ENSACAG00000003463	RBM12B	60	46.753	Anolis_carolinensis
ENSSDUG00000006856	rbm12b	95	41.980	ENSANAG00000034015	RBM12B	74	41.980	Aotus_nancymaae
ENSSDUG00000006856	rbm12b	100	69.113	ENSACLG00000005575	rbm12b	98	69.113	Astatotilapia_calliptera
ENSSDUG00000006856	rbm12b	100	57.494	ENSACLG00000005578	rbm12b	100	57.494	Astatotilapia_calliptera
ENSSDUG00000006856	rbm12b	100	46.908	ENSAMXG00000041973	rbm12b	100	47.904	Astyanax_mexicanus
ENSSDUG00000006856	rbm12b	74	58.333	ENSAMXG00000020853	zgc:153215	78	47.581	Astyanax_mexicanus
ENSSDUG00000006856	rbm12b	86	48.052	ENSBTAG00000013408	RBM12B	73	48.052	Bos_taurus
ENSSDUG00000006856	rbm12b	86	46.753	ENSCAFG00000009109	RBM12B	57	46.753	Canis_familiaris
ENSSDUG00000006856	rbm12b	86	46.753	ENSCAFG00020012203	RBM12B	64	46.753	Canis_lupus_dingo
ENSSDUG00000006856	rbm12b	74	42.346	ENSCHIG00000006790	RBM12B	67	42.346	Capra_hircus
ENSSDUG00000006856	rbm12b	86	46.753	ENSTSYG00000012515	RBM12B	57	46.753	Carlito_syrichta
ENSSDUG00000006856	rbm12b	86	49.351	ENSCAPG00000003543	RBM12B	59	49.351	Cavia_aperea
ENSSDUG00000006856	rbm12b	86	49.351	ENSCPOG00000007815	RBM12B	59	49.351	Cavia_porcellus
ENSSDUG00000006856	rbm12b	86	48.052	ENSCATG00000030769	RBM12B	65	48.052	Cercocebus_atys
ENSSDUG00000006856	rbm12b	86	49.351	ENSCLAG00000017617	RBM12B	59	49.351	Chinchilla_lanigera
ENSSDUG00000006856	rbm12b	86	48.052	ENSCSAG00000018559	RBM12B	56	48.052	Chlorocebus_sabaeus
ENSSDUG00000006856	rbm12b	84	44.444	ENSCHOG00000008934	RBM12B	58	44.444	Choloepus_hoffmanni
ENSSDUG00000006856	rbm12b	99	41.168	ENSCPBG00000003061	RBM12B	99	41.168	Chrysemys_picta_bellii
ENSSDUG00000006856	rbm12b	86	48.052	ENSCANG00000030379	RBM12B	65	48.052	Colobus_angolensis_palliatus
ENSSDUG00000006856	rbm12b	95	41.352	ENSCGRG00001008710	-	71	41.782	Cricetulus_griseus_chok1gshd
ENSSDUG00000006856	rbm12b	73	31.065	ENSCSEG00000001575	-	99	31.065	Cynoglossus_semilaevis
ENSSDUG00000006856	rbm12b	100	63.220	ENSCSEG00000004610	rbm12b	97	62.925	Cynoglossus_semilaevis
ENSSDUG00000006856	rbm12b	100	58.321	ENSCVAG00000011047	rbm12b	100	58.321	Cyprinodon_variegatus
ENSSDUG00000006856	rbm12b	97	36.232	ENSCVAG00000009259	-	100	36.232	Cyprinodon_variegatus
ENSSDUG00000006856	rbm12b	100	44.972	ENSDARG00000079717	rbm12b	100	45.125	Danio_rerio
ENSSDUG00000006856	rbm12b	86	48.052	ENSDNOG00000041608	RBM12B	56	48.052	Dasypus_novemcinctus
ENSSDUG00000006856	rbm12b	86	49.351	ENSDORG00000024034	-	60	49.351	Dipodomys_ordii
ENSSDUG00000006856	rbm12b	76	40.927	ENSETEG00000013005	-	67	40.927	Echinops_telfairi
ENSSDUG00000006856	rbm12b	51	37.838	ENSEBUG00000010930	-	71	37.838	Eptatretus_burgeri
ENSSDUG00000006856	rbm12b	86	48.052	ENSEASG00005016297	RBM12B	64	48.052	Equus_asinus_asinus
ENSSDUG00000006856	rbm12b	86	48.052	ENSECAG00000017870	RBM12B	58	48.052	Equus_caballus
ENSSDUG00000006856	rbm12b	86	49.351	ENSFCAG00000029274	RBM12B	65	49.351	Felis_catus
ENSSDUG00000006856	rbm12b	99	39.944	ENSFALG00000014893	RBM12B	99	40.225	Ficedula_albicollis
ENSSDUG00000006856	rbm12b	86	49.351	ENSFDAG00000005576	RBM12B	58	49.351	Fukomys_damarensis
ENSSDUG00000006856	rbm12b	100	59.697	ENSFHEG00000016425	rbm12b	100	59.697	Fundulus_heteroclitus
ENSSDUG00000006856	rbm12b	99	59.633	ENSGMOG00000013467	rbm12b	100	59.633	Gadus_morhua
ENSSDUG00000006856	rbm12b	99	41.331	ENSGALG00000035129	RBM12B	99	41.317	Gallus_gallus
ENSSDUG00000006856	rbm12b	100	63.206	ENSGAFG00000007224	rbm12b	100	63.206	Gambusia_affinis
ENSSDUG00000006856	rbm12b	100	70.229	ENSGACG00000008682	rbm12b	99	70.229	Gasterosteus_aculeatus
ENSSDUG00000006856	rbm12b	99	41.218	ENSGAGG00000009774	RBM12B	99	41.218	Gopherus_agassizii
ENSSDUG00000006856	rbm12b	86	46.753	ENSGGOG00000011909	RBM12B	64	46.753	Gorilla_gorilla
ENSSDUG00000006856	rbm12b	100	67.066	ENSHBUG00000016227	rbm12b	100	67.066	Haplochromis_burtoni
ENSSDUG00000006856	rbm12b	86	49.351	ENSHGLG00000009063	RBM12B	59	49.351	Heterocephalus_glaber_female
ENSSDUG00000006856	rbm12b	86	49.351	ENSHGLG00100021324	RBM12B	59	49.351	Heterocephalus_glaber_male
ENSSDUG00000006856	rbm12b	100	55.725	ENSHCOG00000014952	rbm12b	100	55.725	Hippocampus_comes
ENSSDUG00000006856	rbm12b	74	53.012	ENSIPUG00000019731	zgc:153215	77	53.012	Ictalurus_punctatus
ENSSDUG00000006856	rbm12b	100	47.478	ENSIPUG00000001167	RBM12B	97	47.478	Ictalurus_punctatus
ENSSDUG00000006856	rbm12b	86	49.351	ENSSTOG00000027445	RBM12B	67	49.351	Ictidomys_tridecemlineatus
ENSSDUG00000006856	rbm12b	86	48.052	ENSJJAG00000004165	-	65	48.052	Jaculus_jaculus
ENSSDUG00000006856	rbm12b	100	60.550	ENSKMAG00000013715	rbm12b	100	60.550	Kryptolebias_marmoratus
ENSSDUG00000006856	rbm12b	74	31.504	ENSKMAG00000004958	zgc:153215	99	31.504	Kryptolebias_marmoratus
ENSSDUG00000006856	rbm12b	100	60.398	ENSKMAG00000013704	rbm12b	97	60.398	Kryptolebias_marmoratus
ENSSDUG00000006856	rbm12b	99	40.220	ENSLACG00000007177	RBM12B	99	40.165	Latimeria_chalumnae
ENSSDUG00000006856	rbm12b	100	49.192	ENSLOCG00000018344	rbm12b	100	49.486	Lepisosteus_oculatus
ENSSDUG00000006856	rbm12b	86	45.455	ENSLAFG00000029949	RBM12B	67	45.455	Loxodonta_africana
ENSSDUG00000006856	rbm12b	86	48.052	ENSMFAG00000045430	RBM12B	65	48.052	Macaca_fascicularis
ENSSDUG00000006856	rbm12b	86	48.052	ENSMMUG00000005558	RBM12B	64	48.052	Macaca_mulatta
ENSSDUG00000006856	rbm12b	86	48.052	ENSMNEG00000041292	RBM12B	65	48.052	Macaca_nemestrina
ENSSDUG00000006856	rbm12b	86	48.052	ENSMLEG00000037288	RBM12B	64	48.052	Mandrillus_leucophaeus
ENSSDUG00000006856	rbm12b	100	77.982	ENSMAMG00000011998	rbm12b	100	77.982	Mastacembelus_armatus
ENSSDUG00000006856	rbm12b	100	68.807	ENSMZEG00005015005	rbm12b	100	68.807	Maylandia_zebra
ENSSDUG00000006856	rbm12b	100	65.443	ENSMZEG00005014845	rbm12b	99	65.284	Maylandia_zebra
ENSSDUG00000006856	rbm12b	75	44.424	ENSMGAG00000011985	RBM12B	99	44.717	Meleagris_gallopavo
ENSSDUG00000006856	rbm12b	95	41.352	ENSMAUG00000021752	-	74	41.551	Mesocricetus_auratus
ENSSDUG00000006856	rbm12b	95	41.061	ENSMICG00000036969	RBM12B	66	48.052	Microcebus_murinus
ENSSDUG00000006856	rbm12b	95	41.468	ENSMOCG00000005603	-	74	41.865	Microtus_ochrogaster
ENSSDUG00000006856	rbm12b	69	38.542	ENSMMOG00000003372	zgc:153215	99	38.542	Mola_mola
ENSSDUG00000006856	rbm12b	99	66.718	ENSMMOG00000002404	rbm12b	94	66.718	Mola_mola
ENSSDUG00000006856	rbm12b	87	45.472	ENSMODG00000007436	RBM12B	77	45.660	Monodelphis_domestica
ENSSDUG00000006856	rbm12b	74	30.957	ENSMALG00000001222	zgc:153215	99	30.957	Monopterus_albus
ENSSDUG00000006856	rbm12b	100	71.560	ENSMALG00000012059	rbm12b	100	71.560	Monopterus_albus
ENSSDUG00000006856	rbm12b	95	42.361	ENSMUSG00000046667	Rbm12b1	74	42.361	Mus_musculus
ENSSDUG00000006856	rbm12b	95	42.063	ENSMUSG00000052137	Rbm12b2	74	42.063	Mus_musculus
ENSSDUG00000006856	rbm12b	95	42.063	MGP_SPRETEiJ_G0026766	-	74	42.063	Mus_spretus
ENSSDUG00000006856	rbm12b	95	42.063	MGP_SPRETEiJ_G0026765	-	67	42.063	Mus_spretus
ENSSDUG00000006856	rbm12b	86	48.052	ENSMPUG00000018637	RBM12B	56	48.052	Mustela_putorius_furo
ENSSDUG00000006856	rbm12b	86	45.455	ENSMLUG00000002359	RBM12B	59	45.455	Myotis_lucifugus
ENSSDUG00000006856	rbm12b	96	41.865	ENSNGAG00000002801	-	67	41.865	Nannospalax_galili
ENSSDUG00000006856	rbm12b	100	70.031	ENSNBRG00000015057	rbm12b	100	70.031	Neolamprologus_brichardi
ENSSDUG00000006856	rbm12b	74	40.566	ENSNBRG00000013644	zgc:153215	81	40.566	Neolamprologus_brichardi
ENSSDUG00000006856	rbm12b	86	48.052	ENSNLEG00000032050	RBM12B	64	48.052	Nomascus_leucogenys
ENSSDUG00000006856	rbm12b	86	49.351	ENSODEG00000019204	RBM12B	60	49.351	Octodon_degus
ENSSDUG00000006856	rbm12b	100	70.336	ENSONIG00000020612	rbm12b	100	70.336	Oreochromis_niloticus
ENSSDUG00000006856	rbm12b	100	39.296	ENSOANG00000015735	-	97	39.859	Ornithorhynchus_anatinus
ENSSDUG00000006856	rbm12b	86	48.052	ENSOCUG00000010353	RBM12B	65	48.052	Oryctolagus_cuniculus
ENSSDUG00000006856	rbm12b	100	62.253	ENSORLG00000008228	rbm12b	97	62.253	Oryzias_latipes
ENSSDUG00000006856	rbm12b	100	62.709	ENSORLG00020013619	rbm12b	97	62.709	Oryzias_latipes_hni
ENSSDUG00000006856	rbm12b	100	62.557	ENSORLG00015019999	rbm12b	97	62.557	Oryzias_latipes_hsok
ENSSDUG00000006856	rbm12b	100	63.470	ENSOMEG00000022523	rbm12b	97	63.470	Oryzias_melastigma
ENSSDUG00000006856	rbm12b	86	48.052	ENSOGAG00000002979	RBM12B	57	48.052	Otolemur_garnettii
ENSSDUG00000006856	rbm12b	86	49.351	ENSPTIG00000020071	RBM12B	65	49.351	Panthera_tigris_altaica
ENSSDUG00000006856	rbm12b	95	41.980	ENSPTRG00000020420	RBM12B	70	41.980	Pan_troglodytes
ENSSDUG00000006856	rbm12b	86	48.052	ENSPANG00000035535	RBM12B	64	48.052	Papio_anubis
ENSSDUG00000006856	rbm12b	73	33.527	ENSPKIG00000014851	zgc:153215	99	33.527	Paramormyrops_kingsleyae
ENSSDUG00000006856	rbm12b	100	50.369	ENSPKIG00000018719	rbm12b	99	50.369	Paramormyrops_kingsleyae
ENSSDUG00000006856	rbm12b	99	41.433	ENSPSIG00000001348	RBM12B	99	41.433	Pelodiscus_sinensis
ENSSDUG00000006856	rbm12b	67	52.244	ENSPMGG00000012348	-	94	52.244	Periophthalmus_magnuspinnatus
ENSSDUG00000006856	rbm12b	95	41.765	ENSPEMG00000008279	-	73	41.650	Peromyscus_maniculatus_bairdii
ENSSDUG00000006856	rbm12b	86	46.435	ENSPCIG00000008556	RBM12B	78	46.628	Phascolarctos_cinereus
ENSSDUG00000006856	rbm12b	67	50.000	ENSPFOG00000017451	zgc:153215	67	50.000	Poecilia_formosa
ENSSDUG00000006856	rbm12b	100	62.748	ENSPFOG00000020937	rbm12b	97	62.748	Poecilia_formosa
ENSSDUG00000006856	rbm12b	100	63.817	ENSPLAG00000018782	rbm12b	100	63.817	Poecilia_latipinna
ENSSDUG00000006856	rbm12b	100	63.817	ENSPMEG00000011418	rbm12b	100	63.817	Poecilia_mexicana
ENSSDUG00000006856	rbm12b	100	63.359	ENSPREG00000020770	rbm12b	100	63.359	Poecilia_reticulata
ENSSDUG00000006856	rbm12b	86	48.052	ENSPPYG00000018745	RBM12B	56	48.052	Pongo_abelii
ENSSDUG00000006856	rbm12b	86	46.753	ENSPCOG00000023546	RBM12B	64	46.753	Propithecus_coquereli
ENSSDUG00000006856	rbm12b	86	48.052	ENSPVAG00000011803	RBM12B	61	48.052	Pteropus_vampyrus
ENSSDUG00000006856	rbm12b	100	69.113	ENSPNYG00000016696	rbm12b	100	69.113	Pundamilia_nyererei
ENSSDUG00000006856	rbm12b	74	57.143	ENSPNAG00000025628	zgc:153215	75	57.143	Pygocentrus_nattereri
ENSSDUG00000006856	rbm12b	100	47.947	ENSPNAG00000008126	rbm12b	97	48.974	Pygocentrus_nattereri
ENSSDUG00000006856	rbm12b	74	42.330	ENSRNOG00000055292	LOC679087	65	42.330	Rattus_norvegicus
ENSSDUG00000006856	rbm12b	96	42.330	ENSRNOG00000016330	Rbm12b	74	42.330	Rattus_norvegicus
ENSSDUG00000006856	rbm12b	86	48.052	ENSRBIG00000035046	RBM12B	64	48.052	Rhinopithecus_bieti
ENSSDUG00000006856	rbm12b	86	48.052	ENSRROG00000023660	RBM12B	67	48.052	Rhinopithecus_roxellana
ENSSDUG00000006856	rbm12b	95	41.782	ENSSBOG00000027592	RBM12B	70	41.782	Saimiri_boliviensis_boliviensis
ENSSDUG00000006856	rbm12b	86	46.050	ENSSHAG00000015335	RBM12B	78	46.243	Sarcophilus_harrisii
ENSSDUG00000006856	rbm12b	100	48.555	ENSSFOG00015001584	rbm12b	100	48.988	Scleropages_formosus
ENSSDUG00000006856	rbm12b	74	33.658	ENSSFOG00015009427	zgc:153215	99	33.658	Scleropages_formosus
ENSSDUG00000006856	rbm12b	100	78.135	ENSSMAG00000019708	rbm12b	100	78.135	Scophthalmus_maximus
ENSSDUG00000006856	rbm12b	74	31.335	ENSSMAG00000019013	zgc:153215	96	31.335	Scophthalmus_maximus
ENSSDUG00000006856	rbm12b	100	98.624	ENSSLDG00000016156	rbm12b	100	98.624	Seriola_lalandi_dorsalis
ENSSDUG00000006856	rbm12b	75	42.330	ENSSARG00000011845	-	68	42.330	Sorex_araneus
ENSSDUG00000006856	rbm12b	74	41.887	ENSSPUG00000016954	RBM12B	91	41.887	Sphenodon_punctatus
ENSSDUG00000006856	rbm12b	100	70.795	ENSSPAG00000006774	rbm12b	100	70.795	Stegastes_partitus
ENSSDUG00000006856	rbm12b	74	31.070	ENSSPAG00000023584	zgc:153215	98	31.481	Stegastes_partitus
ENSSDUG00000006856	rbm12b	86	46.667	ENSSSCG00000006110	RBM12B	57	46.667	Sus_scrofa
ENSSDUG00000006856	rbm12b	75	43.725	ENSTGUG00000011860	RBM12B	97	43.725	Taeniopygia_guttata
ENSSDUG00000006856	rbm12b	100	63.456	ENSTRUG00000013738	rbm12b	100	63.456	Takifugu_rubripes
ENSSDUG00000006856	rbm12b	75	40.039	ENSTBEG00000000449	RBM12B	63	40.039	Tupaia_belangeri
ENSSDUG00000006856	rbm12b	86	48.052	ENSUAMG00000023639	RBM12B	64	48.052	Ursus_americanus
ENSSDUG00000006856	rbm12b	86	48.052	ENSUMAG00000016008	RBM12B	61	48.052	Ursus_maritimus
ENSSDUG00000006856	rbm12b	65	54.945	ENSVPAG00000001080	RBM12B	52	54.945	Vicugna_pacos
ENSSDUG00000006856	rbm12b	86	46.753	ENSVVUG00000002694	RBM12B	64	46.753	Vulpes_vulpes
ENSSDUG00000006856	rbm12b	83	33.212	ENSXETG00000014696	rbm12b	75	33.212	Xenopus_tropicalis
ENSSDUG00000006856	rbm12b	100	36.273	ENSXETG00000014694	rbm12b	100	40.246	Xenopus_tropicalis
ENSSDUG00000006856	rbm12b	66	63.607	ENSXCOG00000019735	-	99	63.607	Xiphophorus_couchianus
ENSSDUG00000006856	rbm12b	100	63.969	ENSXMAG00000014213	rbm12b	100	63.969	Xiphophorus_maculatus
ENSSDUG00000006856	rbm12b	61	36.559	ENSXMAG00000013169	-	97	36.559	Xiphophorus_maculatus