EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000006931 (Gene tree)
Gene ID: 111226509
Gene Symbol: si:ch211-153b23.4 (1 of many)
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: uncharacterized LOC111226509
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 7348 bases
Position: chrBDQW01000161.1:766072-773419
Accession: 111226509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009437	Sua5_yciO_yrdC	PF01300.18	9.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009624	-	2202	XM_022751698	ENSSDUP00000009437	733 (aa)	XP_022607419	-

Gene Model

Click here to download ENSSDUG00000006931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006931's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000006931	si:ch211-153b23.4	92	99.112	ENSSDUG00000006671	si:ch211-153b23.4	84	99.112
ENSSDUG00000006931	si:ch211-153b23.4	80	86.029	ENSSDUG00000006842	si:ch211-153b23.4	74	86.029

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006931	si:ch211-153b23.4	89	85.954	ENSAPOG00000006144	si:ch211-153b23.4	75	87.304	Acanthochromis_polyacanthus
ENSSDUG00000006931	si:ch211-153b23.4	87	87.188	ENSAPOG00000006178	si:ch211-153b23.4	74	87.188	Acanthochromis_polyacanthus
ENSSDUG00000006931	si:ch211-153b23.4	91	85.479	ENSACIG00000006997	si:ch211-153b23.4	78	85.479	Amphilophus_citrinellus
ENSSDUG00000006931	si:ch211-153b23.4	92	80.386	ENSAOCG00000010999	si:ch211-153b23.4	81	80.386	Amphiprion_ocellaris
ENSSDUG00000006931	si:ch211-153b23.4	92	81.724	ENSAPEG00000014665	si:ch211-153b23.4	79	81.724	Amphiprion_percula
ENSSDUG00000006931	si:ch211-153b23.4	92	86.756	ENSATEG00000004948	si:ch211-153b23.4	77	86.756	Anabas_testudineus
ENSSDUG00000006931	si:ch211-153b23.4	91	59.644	ENSAPLG00000013596	-	81	59.644	Anas_platyrhynchos
ENSSDUG00000006931	si:ch211-153b23.4	92	81.548	ENSACLG00000005471	si:ch211-153b23.4	76	81.548	Astatotilapia_calliptera
ENSSDUG00000006931	si:ch211-153b23.4	92	70.458	ENSAMXG00000013879	si:ch211-153b23.4	79	70.685	Astyanax_mexicanus
ENSSDUG00000006931	si:ch211-153b23.4	92	81.101	ENSCSEG00000014838	si:ch211-153b23.4	80	81.101	Cynoglossus_semilaevis
ENSSDUG00000006931	si:ch211-153b23.4	92	82.712	ENSCVAG00000021145	si:ch211-153b23.4	83	82.712	Cyprinodon_variegatus
ENSSDUG00000006931	si:ch211-153b23.4	92	67.013	ENSDARG00000077169	si:ch211-153b23.4	76	67.013	Danio_rerio
ENSSDUG00000006931	si:ch211-153b23.4	92	69.037	ENSELUG00000004961	si:ch211-153b23.4	76	69.037	Esox_lucius
ENSSDUG00000006931	si:ch211-153b23.4	92	54.720	ENSFALG00000011343	-	77	54.720	Ficedula_albicollis
ENSSDUG00000006931	si:ch211-153b23.4	75	91.304	ENSFHEG00000009888	si:ch211-153b23.4	61	91.304	Fundulus_heteroclitus
ENSSDUG00000006931	si:ch211-153b23.4	92	81.657	ENSFHEG00000010001	si:ch211-153b23.4	85	81.657	Fundulus_heteroclitus
ENSSDUG00000006931	si:ch211-153b23.4	92	81.696	ENSGAFG00000007442	si:ch211-153b23.4	80	81.696	Gambusia_affinis
ENSSDUG00000006931	si:ch211-153b23.4	92	84.524	ENSGACG00000018253	si:ch211-153b23.4	79	84.524	Gasterosteus_aculeatus
ENSSDUG00000006931	si:ch211-153b23.4	78	61.364	ENSGAGG00000024601	-	77	61.364	Gopherus_agassizii
ENSSDUG00000006931	si:ch211-153b23.4	78	83.304	ENSHBUG00000000013	si:ch211-153b23.4	76	83.304	Haplochromis_burtoni
ENSSDUG00000006931	si:ch211-153b23.4	92	68.499	ENSIPUG00000015205	si:ch211-153b23.4	80	68.499	Ictalurus_punctatus
ENSSDUG00000006931	si:ch211-153b23.4	92	84.673	ENSKMAG00000006919	-	76	84.673	Kryptolebias_marmoratus
ENSSDUG00000006931	si:ch211-153b23.4	92	84.352	ENSKMAG00000006829	si:ch211-153b23.4	82	84.203	Kryptolebias_marmoratus
ENSSDUG00000006931	si:ch211-153b23.4	92	83.631	ENSLBEG00000026309	si:ch211-153b23.4	77	83.631	Labrus_bergylta
ENSSDUG00000006931	si:ch211-153b23.4	91	62.481	ENSLACG00000017592	si:ch211-153b23.4	80	62.481	Latimeria_chalumnae
ENSSDUG00000006931	si:ch211-153b23.4	92	88.462	ENSMAMG00000009358	si:ch211-153b23.4	83	88.314	Mastacembelus_armatus
ENSSDUG00000006931	si:ch211-153b23.4	92	89.286	ENSMAMG00000009277	si:ch211-153b23.4	81	89.286	Mastacembelus_armatus
ENSSDUG00000006931	si:ch211-153b23.4	92	81.073	ENSMZEG00005011433	si:ch211-153b23.4	82	81.073	Maylandia_zebra
ENSSDUG00000006931	si:ch211-153b23.4	92	59.794	ENSMGAG00000005478	-	82	59.794	Meleagris_gallopavo
ENSSDUG00000006931	si:ch211-153b23.4	92	83.010	ENSMMOG00000004425	si:ch211-153b23.4	83	82.861	Mola_mola
ENSSDUG00000006931	si:ch211-153b23.4	92	80.924	ENSNBRG00000013392	si:ch211-153b23.4	84	80.924	Neolamprologus_brichardi
ENSSDUG00000006931	si:ch211-153b23.4	92	81.548	ENSONIG00000017875	si:ch211-153b23.4	77	81.548	Oreochromis_niloticus
ENSSDUG00000006931	si:ch211-153b23.4	92	81.250	ENSORLG00000006169	si:ch211-153b23.4	77	81.250	Oryzias_latipes
ENSSDUG00000006931	si:ch211-153b23.4	92	81.994	ENSORLG00020009905	si:ch211-153b23.4	77	81.994	Oryzias_latipes_hni
ENSSDUG00000006931	si:ch211-153b23.4	92	81.548	ENSORLG00015003709	si:ch211-153b23.4	77	81.548	Oryzias_latipes_hsok
ENSSDUG00000006931	si:ch211-153b23.4	92	82.143	ENSOMEG00000007682	si:ch211-153b23.4	76	82.143	Oryzias_melastigma
ENSSDUG00000006931	si:ch211-153b23.4	92	65.676	ENSPKIG00000014429	si:ch211-153b23.4	80	65.676	Paramormyrops_kingsleyae
ENSSDUG00000006931	si:ch211-153b23.4	92	68.648	ENSPKIG00000025681	si:ch211-153b23.4	78	68.648	Paramormyrops_kingsleyae
ENSSDUG00000006931	si:ch211-153b23.4	90	62.142	ENSPMGG00000001313	si:ch211-153b23.4	71	62.187	Periophthalmus_magnuspinnatus
ENSSDUG00000006931	si:ch211-153b23.4	75	83.818	ENSPFOG00000012164	si:ch211-153b23.4	77	83.818	Poecilia_formosa
ENSSDUG00000006931	si:ch211-153b23.4	92	80.655	ENSPLAG00000016295	si:ch211-153b23.4	83	80.655	Poecilia_latipinna
ENSSDUG00000006931	si:ch211-153b23.4	91	79.254	ENSPMEG00000007538	si:ch211-153b23.4	81	79.254	Poecilia_mexicana
ENSSDUG00000006931	si:ch211-153b23.4	92	80.924	ENSPNYG00000000250	si:ch211-153b23.4	82	80.924	Pundamilia_nyererei
ENSSDUG00000006931	si:ch211-153b23.4	92	71.917	ENSPNAG00000019554	si:ch211-153b23.4	76	71.917	Pygocentrus_nattereri
ENSSDUG00000006931	si:ch211-153b23.4	92	72.321	ENSSFOG00015010891	si:ch211-153b23.4	77	72.321	Scleropages_formosus
ENSSDUG00000006931	si:ch211-153b23.4	92	66.520	ENSSFOG00015003920	-	77	66.520	Scleropages_formosus
ENSSDUG00000006931	si:ch211-153b23.4	92	85.693	ENSSMAG00000010067	si:ch211-153b23.4	78	85.693	Scophthalmus_maximus
ENSSDUG00000006931	si:ch211-153b23.4	92	58.580	ENSTGUG00000005499	-	83	58.676	Taeniopygia_guttata
ENSSDUG00000006931	si:ch211-153b23.4	92	81.222	ENSTRUG00000003247	si:ch211-153b23.4	83	81.073	Takifugu_rubripes
ENSSDUG00000006931	si:ch211-153b23.4	92	79.911	ENSTNIG00000008958	si:ch211-153b23.4	81	79.911	Tetraodon_nigroviridis
ENSSDUG00000006931	si:ch211-153b23.4	91	54.624	ENSXETG00000004489	-	73	53.949	Xenopus_tropicalis
ENSSDUG00000006931	si:ch211-153b23.4	92	81.994	ENSXMAG00000021388	si:ch211-153b23.4	81	81.994	Xiphophorus_maculatus
ENSSDUG00000006931	si:ch211-153b23.4	92	82.440	ENSXMAG00000009416	-	79	82.440	Xiphophorus_maculatus