EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000006990 (Gene tree)
Gene ID
111236821
Gene Symbol
atxn1b
Alias
atxn1|atxn1a
Full Name
ataxin-1-like
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Plus strand
Length
14915 bases
Position
chrBDQW01000723.1:395702-410616
Accession
111236821
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000009507AXHPF08517.127e-4111
ENSSDUP00000009514AXHPF08517.127e-4111
ENSSDUP00000009516AXHPF08517.127e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000009694-7373-ENSSDUP00000009507833 (aa)-UPI000BBE5AE4
ENSSDUT00000009701-7230-ENSSDUP00000009514833 (aa)-UPI000BBE5AE4
ENSSDUT00000009702-7437XM_022765685ENSSDUP00000009516833 (aa)XP_022621406UPI000BBE5AE4
Gene Model
Click here to download ENSSDUG00000006990's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006990's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000006990atxn1b8043.188ENSSDUG00000011376atxn1a9940.090
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000006990atxn1b9937.800ENSG00000124788ATXN19937.459Homo_sapiens
ENSSDUG00000006990atxn1b10088.369ENSAPOG00000005003atxn1b10087.770Acanthochromis_polyacanthus
ENSSDUG00000006990atxn1b9940.314ENSAPOG00000018662atxn1a9938.791Acanthochromis_polyacanthus
ENSSDUG00000006990atxn1b9938.889ENSAMEG00000004299ATXN19937.832Ailuropoda_melanoleuca
ENSSDUG00000006990atxn1b10075.990ENSACIG00000014661atxn1b10075.750Amphilophus_citrinellus
ENSSDUG00000006990atxn1b9940.135ENSAOCG00000015796atxn1a9938.846Amphiprion_ocellaris
ENSSDUG00000006990atxn1b10088.369ENSAOCG00000019715atxn1b10087.650Amphiprion_ocellaris
ENSSDUG00000006990atxn1b9940.270ENSAPEG00000011313atxn1a9938.735Amphiprion_percula
ENSSDUG00000006990atxn1b10088.369ENSAPEG00000022436atxn1b10087.890Amphiprion_percula
ENSSDUG00000006990atxn1b10089.556ENSATEG00000002982atxn1b10089.556Anabas_testudineus
ENSSDUG00000006990atxn1b9938.453ENSACAG00000003919ATXN19937.430Anolis_carolinensis
ENSSDUG00000006990atxn1b7536.888ENSANAG00000025424-9636.390Aotus_nancymaae
ENSSDUG00000006990atxn1b9838.573ENSANAG00000025206-9538.111Aotus_nancymaae
ENSSDUG00000006990atxn1b9939.477ENSACLG00000015429atxn1a9939.130Astatotilapia_calliptera
ENSSDUG00000006990atxn1b10087.515ENSACLG00000005697atxn1b10087.515Astatotilapia_calliptera
ENSSDUG00000006990atxn1b9940.068ENSAMXG00000042368atxn1a9941.297Astyanax_mexicanus
ENSSDUG00000006990atxn1b9938.268ENSBTAG00000019675ATXN19938.361Bos_taurus
ENSSDUG00000006990atxn1b9838.350ENSCJAG00000006563ATXN19337.889Callithrix_jacchus
ENSSDUG00000006990atxn1b9939.222ENSCAFG00000009934ATXN19938.624Canis_familiaris
ENSSDUG00000006990atxn1b9838.877ENSCAFG00020012647ATXN19538.352Canis_lupus_dingo
ENSSDUG00000006990atxn1b9937.528ENSCHIG00000018697ATXN19938.037Capra_hircus
ENSSDUG00000006990atxn1b6250.000ENSTSYG00000000858ATXN19951.027Carlito_syrichta
ENSSDUG00000006990atxn1b9938.274ENSCAPG00000013095ATXN19938.419Cavia_aperea
ENSSDUG00000006990atxn1b9938.616ENSCPOG00000022869ATXN19938.764Cavia_porcellus
ENSSDUG00000006990atxn1b9938.667ENSCCAG00000018590ATXN19938.137Cebus_capucinus
ENSSDUG00000006990atxn1b9938.317ENSCATG00000042777ATXN19937.901Cercocebus_atys
ENSSDUG00000006990atxn1b9939.106ENSCLAG00000002212ATXN19938.641Chinchilla_lanigera
ENSSDUG00000006990atxn1b9938.402ENSCSAG00000007589ATXN19937.984Chlorocebus_sabaeus
ENSSDUG00000006990atxn1b9939.019ENSCPBG00000022373ATXN19938.771Chrysemys_picta_bellii
ENSSDUG00000006990atxn1b9938.462ENSCANG00000033673ATXN19938.042Colobus_angolensis_palliatus
ENSSDUG00000006990atxn1b9938.760ENSCGRG00001022108Atxn19937.665Cricetulus_griseus_chok1gshd
ENSSDUG00000006990atxn1b9939.155ENSCGRG00000014084Atxn19938.000Cricetulus_griseus_crigri
ENSSDUG00000006990atxn1b10081.152ENSCSEG00000004666atxn1b10081.273Cynoglossus_semilaevis
ENSSDUG00000006990atxn1b10081.317ENSCVAG00000010945atxn1b10081.273Cyprinodon_variegatus
ENSSDUG00000006990atxn1b9938.618ENSCVAG00000023240atxn1a9937.091Cyprinodon_variegatus
ENSSDUG00000006990atxn1b9943.951ENSDARG00000060862atxn1b9942.889Danio_rerio
ENSSDUG00000006990atxn1b9940.181ENSDARG00000061687atxn1a9941.516Danio_rerio
ENSSDUG00000006990atxn1b7844.711ENSDNOG00000048471ATXN18745.127Dasypus_novemcinctus
ENSSDUG00000006990atxn1b9937.939ENSDORG00000005940Atxn19937.349Dipodomys_ordii
ENSSDUG00000006990atxn1b8242.254ENSETEG00000003815ATXN18744.144Echinops_telfairi
ENSSDUG00000006990atxn1b9938.596ENSEASG00005011799ATXN19938.242Equus_asinus_asinus
ENSSDUG00000006990atxn1b9938.767ENSECAG00000009251ATXN19938.079Equus_caballus
ENSSDUG00000006990atxn1b9938.219ENSEEUG00000007120ATXN19937.832Erinaceus_europaeus
ENSSDUG00000006990atxn1b9858.056ENSELUG00000001311atxn1b7757.917Esox_lucius
ENSSDUG00000006990atxn1b9938.090ENSFCAG00000011298ATXN19938.239Felis_catus
ENSSDUG00000006990atxn1b9939.353ENSFALG00000013400ATXN19938.702Ficedula_albicollis
ENSSDUG00000006990atxn1b8843.949ENSFDAG00000020905ATXN19936.563Fukomys_damarensis
ENSSDUG00000006990atxn1b10081.243ENSFHEG00000017226atxn1b10080.838Fundulus_heteroclitus
ENSSDUG00000006990atxn1b8039.861ENSFHEG00000019419atxn1a9937.079Fundulus_heteroclitus
ENSSDUG00000006990atxn1b9959.524ENSGMOG00000013508atxn1b10059.118Gadus_morhua
ENSSDUG00000006990atxn1b9940.247ENSGALG00000012709ATXN19939.370Gallus_gallus
ENSSDUG00000006990atxn1b9939.590ENSGAFG00000010544atxn1a9937.472Gambusia_affinis
ENSSDUG00000006990atxn1b10081.078ENSGAFG00000007295atxn1b10081.873Gambusia_affinis
ENSSDUG00000006990atxn1b9975.394ENSGACG00000008747atxn1b10075.515Gasterosteus_aculeatus
ENSSDUG00000006990atxn1b8573.913ENSGACG00000003472atxn1a9937.471Gasterosteus_aculeatus
ENSSDUG00000006990atxn1b9939.179ENSGAGG00000006868ATXN19937.723Gopherus_agassizii
ENSSDUG00000006990atxn1b9938.022ENSGGOG00000004169ATXN19937.678Gorilla_gorilla
ENSSDUG00000006990atxn1b10087.515ENSHBUG00000016081atxn1b10087.515Haplochromis_burtoni
ENSSDUG00000006990atxn1b9939.590ENSHBUG00000002508atxn1a9939.294Haplochromis_burtoni
ENSSDUG00000006990atxn1b9940.179ENSHGLG00000009360ATXN19939.174Heterocephalus_glaber_female
ENSSDUG00000006990atxn1b9940.245ENSHGLG00100003038ATXN19939.286Heterocephalus_glaber_male
ENSSDUG00000006990atxn1b9978.219ENSHCOG00000014835atxn1b9977.858Hippocampus_comes
ENSSDUG00000006990atxn1b8738.942ENSHCOG00000019032atxn1a8556.364Hippocampus_comes
ENSSDUG00000006990atxn1b9940.046ENSIPUG00000001402atxn19069.388Ictalurus_punctatus
ENSSDUG00000006990atxn1b9942.968ENSIPUG00000002088atxn1b10041.501Ictalurus_punctatus
ENSSDUG00000006990atxn1b9938.852ENSSTOG00000025423ATXN19938.667Ictidomys_tridecemlineatus
ENSSDUG00000006990atxn1b9938.436ENSJJAG00000000377Atxn19454.545Jaculus_jaculus
ENSSDUG00000006990atxn1b9982.545ENSKMAG00000013507atxn1b9981.697Kryptolebias_marmoratus
ENSSDUG00000006990atxn1b9940.023ENSKMAG00000007216atxn1a9939.350Kryptolebias_marmoratus
ENSSDUG00000006990atxn1b10084.588ENSLBEG00000024264atxn1b10084.468Labrus_bergylta
ENSSDUG00000006990atxn1b9939.842ENSLBEG00000024388atxn1a9939.886Labrus_bergylta
ENSSDUG00000006990atxn1b9938.401ENSLACG00000005371ATXN19938.202Latimeria_chalumnae
ENSSDUG00000006990atxn1b8571.429ENSLOCG00000002910atxn1a9162.295Lepisosteus_oculatus
ENSSDUG00000006990atxn1b9938.504ENSLAFG00000015231ATXN19937.954Loxodonta_africana
ENSSDUG00000006990atxn1b9938.258ENSMFAG00000032779ATXN19937.817Macaca_fascicularis
ENSSDUG00000006990atxn1b9938.232ENSMMUG00000002940ATXN19937.817Macaca_mulatta
ENSSDUG00000006990atxn1b9938.343ENSMNEG00000036667ATXN19937.901Macaca_nemestrina
ENSSDUG00000006990atxn1b7540.569ENSMLEG00000040480ATXN19339.687Mandrillus_leucophaeus
ENSSDUG00000006990atxn1b9940.251ENSMAMG00000014004atxn1a9940.158Mastacembelus_armatus
ENSSDUG00000006990atxn1b10088.715ENSMAMG00000011503atxn1b10088.715Mastacembelus_armatus
ENSSDUG00000006990atxn1b9939.477ENSMZEG00005003602atxn1a9939.130Maylandia_zebra
ENSSDUG00000006990atxn1b10087.395ENSMZEG00005015064atxn1b10087.395Maylandia_zebra
ENSSDUG00000006990atxn1b9939.777ENSMGAG00000003028ATXN19650.000Meleagris_gallopavo
ENSSDUG00000006990atxn1b9939.357ENSMAUG00000011491Atxn19938.521Mesocricetus_auratus
ENSSDUG00000006990atxn1b9938.386ENSMICG00000011875ATXN19938.248Microcebus_murinus
ENSSDUG00000006990atxn1b9939.266ENSMOCG00000001527Atxn19937.889Microtus_ochrogaster
ENSSDUG00000006990atxn1b9482.105ENSMMOG00000002884atxn1b10083.951Mola_mola
ENSSDUG00000006990atxn1b9939.621ENSMMOG00000018593atxn1a9939.397Mola_mola
ENSSDUG00000006990atxn1b9938.537ENSMODG00000010827ATXN19937.541Monodelphis_domestica
ENSSDUG00000006990atxn1b9989.915ENSMALG00000012137atxn1b9989.307Monopterus_albus
ENSSDUG00000006990atxn1b8670.000ENSMALG00000005209atxn1a9940.000Monopterus_albus
ENSSDUG00000006990atxn1b9939.530MGP_CAROLIEiJ_G0018479Atxn19938.137Mus_caroli
ENSSDUG00000006990atxn1b9939.509ENSMUSG00000046876Atxn19938.265Mus_musculus
ENSSDUG00000006990atxn1b9939.509MGP_PahariEiJ_G0019546Atxn19938.042Mus_pahari
ENSSDUG00000006990atxn1b9939.778MGP_SPRETEiJ_G0019357Atxn19938.265Mus_spretus
ENSSDUG00000006990atxn1b9939.024ENSMPUG00000005398ATXN19937.638Mustela_putorius_furo
ENSSDUG00000006990atxn1b9939.868ENSMLUG00000000896ATXN19938.598Myotis_lucifugus
ENSSDUG00000006990atxn1b9938.589ENSNGAG00000020481Atxn19937.946Nannospalax_galili
ENSSDUG00000006990atxn1b10077.671ENSNBRG00000014776atxn1b10077.551Neolamprologus_brichardi
ENSSDUG00000006990atxn1b9939.796ENSNBRG00000013216atxn1a9939.249Neolamprologus_brichardi
ENSSDUG00000006990atxn1b9938.427ENSNLEG00000001064ATXN19938.190Nomascus_leucogenys
ENSSDUG00000006990atxn1b9837.514ENSMEUG00000014680ATXN19636.222Notamacropus_eugenii
ENSSDUG00000006990atxn1b9938.606ENSODEG00000006297ATXN19938.027Octodon_degus
ENSSDUG00000006990atxn1b10088.115ENSONIG00000003094atxn1b10088.115Oreochromis_niloticus
ENSSDUG00000006990atxn1b8932.859ENSOANG00000011866ATXN19532.653Ornithorhynchus_anatinus
ENSSDUG00000006990atxn1b9939.448ENSOCUG00000015360ATXN19938.317Oryctolagus_cuniculus
ENSSDUG00000006990atxn1b10081.295ENSORLG00000008288atxn1b10081.175Oryzias_latipes
ENSSDUG00000006990atxn1b9937.204ENSORLG00000013003atxn1a9936.878Oryzias_latipes
ENSSDUG00000006990atxn1b10081.459ENSORLG00020013514atxn1b10081.220Oryzias_latipes_hni
ENSSDUG00000006990atxn1b9936.818ENSORLG00020006722atxn1a9936.114Oryzias_latipes_hni
ENSSDUG00000006990atxn1b9937.656ENSORLG00015014668atxn1a9936.117Oryzias_latipes_hsok
ENSSDUG00000006990atxn1b10081.415ENSORLG00015019876atxn1b10081.175Oryzias_latipes_hsok
ENSSDUG00000006990atxn1b9937.084ENSOMEG00000012883atxn1a9837.300Oryzias_melastigma
ENSSDUG00000006990atxn1b10082.134ENSOMEG00000003259atxn1b10081.894Oryzias_melastigma
ENSSDUG00000006990atxn1b9938.106ENSOGAG00000028623ATXN110037.832Otolemur_garnettii
ENSSDUG00000006990atxn1b7656.863ENSOARG00000012141ATXN18039.181Ovis_aries
ENSSDUG00000006990atxn1b9937.923ENSPPAG00000028993ATXN19937.582Pan_paniscus
ENSSDUG00000006990atxn1b9939.242ENSPPRG00000004547ATXN19938.418Panthera_pardus
ENSSDUG00000006990atxn1b9938.074ENSPTRG00000039250ATXN19937.705Pan_troglodytes
ENSSDUG00000006990atxn1b9938.343ENSPANG00000024249ATXN19938.079Papio_anubis
ENSSDUG00000006990atxn1b7237.537ENSPSIG00000007158ATXN19236.024Pelodiscus_sinensis
ENSSDUG00000006990atxn1b6776.812ENSPMGG00000013610atxn1b9973.440Periophthalmus_magnuspinnatus
ENSSDUG00000006990atxn1b6968.889ENSPMGG00000022926atxn1a6668.889Periophthalmus_magnuspinnatus
ENSSDUG00000006990atxn1b9939.198ENSPEMG00000014930Atxn19938.111Peromyscus_maniculatus_bairdii
ENSSDUG00000006990atxn1b9938.901ENSPCIG00000019413ATXN19937.665Phascolarctos_cinereus
ENSSDUG00000006990atxn1b8040.307ENSPFOG00000014422atxn1a9937.699Poecilia_formosa
ENSSDUG00000006990atxn1b8570.732ENSPLAG00000018978atxn1a9572.000Poecilia_latipinna
ENSSDUG00000006990atxn1b10082.635ENSPLAG00000018703atxn1b10082.473Poecilia_latipinna
ENSSDUG00000006990atxn1b9939.408ENSPMEG00000002647atxn1a9937.813Poecilia_mexicana
ENSSDUG00000006990atxn1b10082.395ENSPMEG00000023723atxn1b10082.233Poecilia_mexicana
ENSSDUG00000006990atxn1b10082.635ENSPREG00000020308atxn1b10082.473Poecilia_reticulata
ENSSDUG00000006990atxn1b8040.473ENSPREG00000008333atxn1a8237.381Poecilia_reticulata
ENSSDUG00000006990atxn1b9937.923ENSPPYG00000016254ATXN19937.514Pongo_abelii
ENSSDUG00000006990atxn1b7360.377ENSPCAG00000008196ATXN16647.810Procavia_capensis
ENSSDUG00000006990atxn1b9938.713ENSPCOG00000013612ATXN19938.359Propithecus_coquereli
ENSSDUG00000006990atxn1b8938.889ENSPVAG00000016937ATXN19635.580Pteropus_vampyrus
ENSSDUG00000006990atxn1b9939.363ENSPNYG00000011920atxn1a9939.016Pundamilia_nyererei
ENSSDUG00000006990atxn1b10077.791ENSPNYG00000017095atxn1b10077.671Pundamilia_nyererei
ENSSDUG00000006990atxn1b9940.674ENSPNAG00000010587atxn1a9940.158Pygocentrus_nattereri
ENSSDUG00000006990atxn1b9942.826ENSPNAG00000001226atxn1b10040.687Pygocentrus_nattereri
ENSSDUG00000006990atxn1b9939.290ENSRNOG00000016998Atxn19938.122Rattus_norvegicus
ENSSDUG00000006990atxn1b9938.200ENSRBIG00000028213ATXN19937.844Rhinopithecus_bieti
ENSSDUG00000006990atxn1b9938.411ENSRROG00000032751ATXN19938.053Rhinopithecus_roxellana
ENSSDUG00000006990atxn1b9938.710ENSSBOG00000017381-9938.137Saimiri_boliviensis_boliviensis
ENSSDUG00000006990atxn1b7435.513ENSSBOG00000030307-9134.172Saimiri_boliviensis_boliviensis
ENSSDUG00000006990atxn1b9942.276ENSSFOG00015005189atxn19941.581Scleropages_formosus
ENSSDUG00000006990atxn1b9944.621ENSSFOG00015000179atxn1b9943.613Scleropages_formosus
ENSSDUG00000006990atxn1b9739.384ENSSMAG00000007731atxn1a9439.636Scophthalmus_maximus
ENSSDUG00000006990atxn1b10089.808ENSSMAG00000019621atxn1b10089.448Scophthalmus_maximus
ENSSDUG00000006990atxn1b8043.033ENSSLDG00000013505atxn1a9939.978Seriola_lalandi_dorsalis
ENSSDUG00000006990atxn1b10099.520ENSSLDG00000016306atxn1b10099.520Seriola_lalandi_dorsalis
ENSSDUG00000006990atxn1b9938.814ENSSPUG00000016650ATXN19937.401Sphenodon_punctatus
ENSSDUG00000006990atxn1b10090.048ENSSPAG00000003388atxn1b10089.928Stegastes_partitus
ENSSDUG00000006990atxn1b8041.530ENSSPAG00000019849atxn1a9938.631Stegastes_partitus
ENSSDUG00000006990atxn1b9937.841ENSSSCG00000001065ATXN19937.199Sus_scrofa
ENSSDUG00000006990atxn1b9937.738ENSTGUG00000005986ATXN19937.598Taeniopygia_guttata
ENSSDUG00000006990atxn1b9977.191ENSTRUG00000024789atxn1b9976.951Takifugu_rubripes
ENSSDUG00000006990atxn1b9939.579ENSTRUG00000014645atxn1a9939.955Takifugu_rubripes
ENSSDUG00000006990atxn1b9974.939ENSTNIG00000018398atxn1b9974.939Tetraodon_nigroviridis
ENSSDUG00000006990atxn1b9940.091ENSTNIG00000005089atxn1a9939.282Tetraodon_nigroviridis
ENSSDUG00000006990atxn1b9838.513ENSTTRG00000014678ATXN19637.904Tursiops_truncatus
ENSSDUG00000006990atxn1b9938.889ENSUAMG00000004064ATXN19937.778Ursus_americanus
ENSSDUG00000006990atxn1b5143.882ENSUMAG00000017635-9243.305Ursus_maritimus
ENSSDUG00000006990atxn1b9938.901ENSVVUG00000003386ATXN19938.310Vulpes_vulpes
ENSSDUG00000006990atxn1b8571.111ENSXCOG00000020061atxn1a9371.111Xiphophorus_couchianus
ENSSDUG00000006990atxn1b10071.789ENSXCOG00000019714atxn1b10072.749Xiphophorus_couchianus
ENSSDUG00000006990atxn1b10082.156ENSXMAG00000014270atxn1b10082.953Xiphophorus_maculatus
ENSSDUG00000006990atxn1b9938.787ENSXMAG00000003615atxn1a9937.342Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us