EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000007038 (Gene tree)
Gene ID: 111223260
Gene Symbol: twistnb
Alias: -
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5532 bases
Position: chrBDQW01000110.1:3957169-3962700
Accession: 111223260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009569	SHS2_Rpb7-N	PF03876.17	6.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009756	-	3334	XM_022747336	ENSSDUP00000009569	380 (aa)	XP_022603057	UPI000BBEFFD2

Gene Model

Click here to download ENSSDUG00000007038's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007038's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007038	twistnb	81	46.774	ENSG00000105849	TWISTNB	92	42.899	Homo_sapiens
ENSSDUG00000007038	twistnb	100	76.440	ENSAPOG00000011796	twistnb	100	76.440	Acanthochromis_polyacanthus
ENSSDUG00000007038	twistnb	98	71.088	ENSACIG00000020400	twistnb	100	67.085	Amphilophus_citrinellus
ENSSDUG00000007038	twistnb	99	76.115	ENSAOCG00000024200	twistnb	99	76.115	Amphiprion_ocellaris
ENSSDUG00000007038	twistnb	99	76.640	ENSAPEG00000016750	twistnb	99	76.640	Amphiprion_percula
ENSSDUG00000007038	twistnb	94	77.285	ENSATEG00000017956	twistnb	99	77.632	Anabas_testudineus
ENSSDUG00000007038	twistnb	81	44.099	ENSANAG00000026418	TWISTNB	93	42.075	Aotus_nancymaae
ENSSDUG00000007038	twistnb	100	68.668	ENSACLG00000022280	twistnb	94	68.407	Astatotilapia_calliptera
ENSSDUG00000007038	twistnb	51	61.340	ENSAMXG00000035868	twistnb	77	51.527	Astyanax_mexicanus
ENSSDUG00000007038	twistnb	81	46.580	ENSBTAG00000006721	TWISTNB	89	43.533	Bos_taurus
ENSSDUG00000007038	twistnb	63	48.438	ENSCJAG00000001148	TWISTNB	93	42.939	Callithrix_jacchus
ENSSDUG00000007038	twistnb	81	47.727	ENSCAFG00020002140	TWISTNB	87	44.880	Canis_lupus_dingo
ENSSDUG00000007038	twistnb	81	46.254	ENSCHIG00000024078	TWISTNB	90	44.340	Capra_hircus
ENSSDUG00000007038	twistnb	59	50.607	ENSTSYG00000001471	TWISTNB	87	43.658	Carlito_syrichta
ENSSDUG00000007038	twistnb	84	42.901	ENSCPOG00000031651	TWISTNB	97	41.834	Cavia_porcellus
ENSSDUG00000007038	twistnb	81	46.452	ENSCATG00000035621	TWISTNB	92	42.609	Cercocebus_atys
ENSSDUG00000007038	twistnb	81	46.452	ENSCSAG00000013544	TWISTNB	92	42.609	Chlorocebus_sabaeus
ENSSDUG00000007038	twistnb	90	43.895	ENSCPBG00000000367	TWISTNB	68	51.835	Chrysemys_picta_bellii
ENSSDUG00000007038	twistnb	93	65.668	ENSCVAG00000014324	twistnb	95	65.123	Cyprinodon_variegatus
ENSSDUG00000007038	twistnb	88	45.652	ENSDARG00000024416	twistnb	94	46.561	Danio_rerio
ENSSDUG00000007038	twistnb	81	45.912	ENSDORG00000007795	Twistnb	57	59.239	Dipodomys_ordii
ENSSDUG00000007038	twistnb	98	55.937	ENSELUG00000000098	TWISTNB	98	55.795	Esox_lucius
ENSSDUG00000007038	twistnb	82	40.187	ENSFALG00000009761	TWISTNB	51	55.128	Ficedula_albicollis
ENSSDUG00000007038	twistnb	99	67.725	ENSFHEG00000013318	twistnb	97	67.213	Fundulus_heteroclitus
ENSSDUG00000007038	twistnb	92	39.831	ENSGALG00000010863	TWISTNB	55	47.111	Gallus_gallus
ENSSDUG00000007038	twistnb	96	64.228	ENSGAFG00000018309	twistnb	97	65.405	Gambusia_affinis
ENSSDUG00000007038	twistnb	68	67.181	ENSGACG00000006425	twistnb	93	67.181	Gasterosteus_aculeatus
ENSSDUG00000007038	twistnb	81	46.104	ENSGGOG00000026888	TWISTNB	92	42.899	Gorilla_gorilla
ENSSDUG00000007038	twistnb	100	68.930	ENSHBUG00000020155	twistnb	94	68.668	Haplochromis_burtoni
ENSSDUG00000007038	twistnb	90	44.220	ENSHGLG00000010976	TWISTNB	93	42.470	Heterocephalus_glaber_female
ENSSDUG00000007038	twistnb	99	58.513	ENSHCOG00000010590	twistnb	96	60.599	Hippocampus_comes
ENSSDUG00000007038	twistnb	98	50.000	ENSIPUG00000004117	twistnb	95	51.117	Ictalurus_punctatus
ENSSDUG00000007038	twistnb	100	67.277	ENSKMAG00000001591	twistnb	100	67.016	Kryptolebias_marmoratus
ENSSDUG00000007038	twistnb	100	73.560	ENSLBEG00000024225	twistnb	100	73.037	Labrus_bergylta
ENSSDUG00000007038	twistnb	98	45.187	ENSLACG00000010508	TWISTNB	61	55.505	Latimeria_chalumnae
ENSSDUG00000007038	twistnb	81	44.375	ENSMFAG00000045328	TWISTNB	92	42.319	Macaca_fascicularis
ENSSDUG00000007038	twistnb	81	44.375	ENSMMUG00000009609	TWISTNB	91	42.319	Macaca_mulatta
ENSSDUG00000007038	twistnb	81	43.750	ENSMNEG00000041159	TWISTNB	92	41.739	Macaca_nemestrina
ENSSDUG00000007038	twistnb	81	46.452	ENSMLEG00000042783	TWISTNB	92	42.609	Mandrillus_leucophaeus
ENSSDUG00000007038	twistnb	100	68.668	ENSMZEG00005007561	twistnb	94	68.407	Maylandia_zebra
ENSSDUG00000007038	twistnb	81	42.547	ENSMICG00000036489	TWISTNB	92	42.647	Microcebus_murinus
ENSSDUG00000007038	twistnb	100	66.582	ENSMMOG00000020085	twistnb	100	66.582	Mola_mola
ENSSDUG00000007038	twistnb	85	41.846	ENSMODG00000001402	-	66	39.877	Monodelphis_domestica
ENSSDUG00000007038	twistnb	100	65.316	ENSMALG00000016407	twistnb	100	66.162	Monopterus_albus
ENSSDUG00000007038	twistnb	84	45.260	MGP_PahariEiJ_G0029450	Twistnb	60	55.779	Mus_pahari
ENSSDUG00000007038	twistnb	81	45.928	ENSMPUG00000013948	TWISTNB	52	59.239	Mustela_putorius_furo
ENSSDUG00000007038	twistnb	51	53.093	ENSMLUG00000008848	TWISTNB	98	44.144	Myotis_lucifugus
ENSSDUG00000007038	twistnb	95	68.132	ENSNBRG00000008652	twistnb	100	67.885	Neolamprologus_brichardi
ENSSDUG00000007038	twistnb	81	46.602	ENSNLEG00000035755	TWISTNB	92	42.442	Nomascus_leucogenys
ENSSDUG00000007038	twistnb	80	46.326	ENSOPRG00000016109	TWISTNB	91	43.030	Ochotona_princeps
ENSSDUG00000007038	twistnb	96	65.054	ENSORLG00000004005	twistnb	85	65.574	Oryzias_latipes
ENSSDUG00000007038	twistnb	100	65.796	ENSORLG00020002579	twistnb	100	65.274	Oryzias_latipes_hni
ENSSDUG00000007038	twistnb	100	65.974	ENSORLG00015013403	twistnb	89	65.714	Oryzias_latipes_hsok
ENSSDUG00000007038	twistnb	81	46.254	ENSOARG00000009803	TWISTNB	60	55.502	Ovis_aries
ENSSDUG00000007038	twistnb	81	47.097	ENSPPAG00000034623	TWISTNB	92	43.023	Pan_paniscus
ENSSDUG00000007038	twistnb	81	45.631	ENSPPRG00000005877	TWISTNB	90	42.025	Panthera_pardus
ENSSDUG00000007038	twistnb	76	46.181	ENSPTIG00000021539	TWISTNB	56	58.788	Panthera_tigris_altaica
ENSSDUG00000007038	twistnb	81	47.097	ENSPTRG00000018962	TWISTNB	92	42.899	Pan_troglodytes
ENSSDUG00000007038	twistnb	81	46.452	ENSPANG00000015736	TWISTNB	92	42.609	Papio_anubis
ENSSDUG00000007038	twistnb	60	58.772	ENSPKIG00000025635	twistnb	62	58.772	Paramormyrops_kingsleyae
ENSSDUG00000007038	twistnb	95	65.934	ENSPMGG00000019023	twistnb	94	64.641	Periophthalmus_magnuspinnatus
ENSSDUG00000007038	twistnb	78	42.617	ENSPCIG00000017456	TWISTNB	89	39.692	Phascolarctos_cinereus
ENSSDUG00000007038	twistnb	81	43.974	ENSPPYG00000017752	TWISTNB	92	43.023	Pongo_abelii
ENSSDUG00000007038	twistnb	100	68.668	ENSPNYG00000002674	twistnb	100	68.146	Pundamilia_nyererei
ENSSDUG00000007038	twistnb	93	48.451	ENSPNAG00000011956	twistnb	95	48.451	Pygocentrus_nattereri
ENSSDUG00000007038	twistnb	63	47.656	ENSSBOG00000023188	TWISTNB	93	42.363	Saimiri_boliviensis_boliviensis
ENSSDUG00000007038	twistnb	73	48.173	ENSSFOG00015012788	twistnb	61	62.500	Scleropages_formosus
ENSSDUG00000007038	twistnb	100	78.851	ENSSMAG00000012792	twistnb	100	78.329	Scophthalmus_maximus
ENSSDUG00000007038	twistnb	82	39.062	ENSSPUG00000007595	TWISTNB	61	53.226	Sphenodon_punctatus
ENSSDUG00000007038	twistnb	100	74.607	ENSSPAG00000005871	twistnb	100	74.607	Stegastes_partitus
ENSSDUG00000007038	twistnb	83	42.633	ENSSSCG00000025298	TWISTNB	92	42.988	Sus_scrofa
ENSSDUG00000007038	twistnb	89	62.209	ENSTNIG00000017778	twistnb	95	60.180	Tetraodon_nigroviridis
ENSSDUG00000007038	twistnb	81	46.624	ENSTBEG00000003554	TWISTNB	87	46.106	Tupaia_belangeri
ENSSDUG00000007038	twistnb	94	66.667	ENSXCOG00000020199	twistnb	95	66.111	Xiphophorus_couchianus