EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000007045 (Gene tree)
Gene ID: 111231624
Gene Symbol: larp7
Alias: fa10g04|wu:fa10g04|zgc:56476
Full Name: La ribonucleoprotein domain family member 7
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 9973 bases
Position: chrBDQW01000309.1:501169-511141
Accession: 111231624
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009573	RRM_1	PF00076.22	1.3e-17	1	1
ENSSDUP00000009600	RRM_1	PF00076.22	1.4e-17	1	1
ENSSDUP00000009600	RRM_3	PF08777.11	1.3e-32	1	1
ENSSDUP00000009573	RRM_3	PF08777.11	2.2e-32	1	1
ENSSDUP00000009573	La	PF05383.17	1.6e-22	1	1
ENSSDUP00000009600	La	PF05383.17	1.7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009786	-	4625	XM_022758812	ENSSDUP00000009600	564 (aa)	XP_022614533	UPI000BBE5099
ENSSDUT00000009760	-	1948	-	ENSSDUP00000009573	543 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000007045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007045's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007045	larp7	95	55.277	ENSG00000174720	LARP7	100	64.341	Homo_sapiens
ENSSDUG00000007045	larp7	100	83.951	ENSAPOG00000014570	larp7	100	83.951	Acanthochromis_polyacanthus
ENSSDUG00000007045	larp7	100	76.241	ENSACIG00000023850	larp7	100	76.241	Amphilophus_citrinellus
ENSSDUG00000007045	larp7	100	84.656	ENSAOCG00000016160	larp7	100	84.656	Amphiprion_ocellaris
ENSSDUG00000007045	larp7	100	84.656	ENSAPEG00000021823	larp7	100	84.656	Amphiprion_percula
ENSSDUG00000007045	larp7	100	83.951	ENSATEG00000016238	larp7	100	83.951	Anabas_testudineus
ENSSDUG00000007045	larp7	99	54.167	ENSAPLG00000012887	LARP7	99	53.987	Anas_platyrhynchos
ENSSDUG00000007045	larp7	95	54.545	ENSACAG00000010662	LARP7	96	52.951	Anolis_carolinensis
ENSSDUG00000007045	larp7	95	52.324	ENSANAG00000031139	-	99	54.181	Aotus_nancymaae
ENSSDUG00000007045	larp7	95	45.242	ENSANAG00000022318	-	99	43.664	Aotus_nancymaae
ENSSDUG00000007045	larp7	100	79.438	ENSACLG00000023184	larp7	100	79.438	Astatotilapia_calliptera
ENSSDUG00000007045	larp7	99	59.123	ENSAMXG00000002549	larp7	99	60.348	Astyanax_mexicanus
ENSSDUG00000007045	larp7	95	55.712	ENSBTAG00000009632	LARP7	99	54.469	Bos_taurus
ENSSDUG00000007045	larp7	95	54.073	ENSCJAG00000003711	LARP7	99	55.668	Callithrix_jacchus
ENSSDUG00000007045	larp7	99	55.798	ENSCHIG00000014163	-	99	56.081	Capra_hircus
ENSSDUG00000007045	larp7	98	51.873	ENSCHIG00000013971	-	99	51.865	Capra_hircus
ENSSDUG00000007045	larp7	92	54.735	ENSTSYG00000006769	-	100	53.142	Carlito_syrichta
ENSSDUG00000007045	larp7	95	47.602	ENSCAPG00000009328	LARP7	98	49.645	Cavia_aperea
ENSSDUG00000007045	larp7	95	56.250	ENSCPOG00000011830	LARP7	98	56.250	Cavia_porcellus
ENSSDUG00000007045	larp7	95	53.886	ENSCCAG00000026787	-	99	56.040	Cebus_capucinus
ENSSDUG00000007045	larp7	95	50.454	ENSCCAG00000023563	-	99	50.272	Cebus_capucinus
ENSSDUG00000007045	larp7	95	56.216	ENSCLAG00000005894	LARP7	97	56.614	Chinchilla_lanigera
ENSSDUG00000007045	larp7	92	48.175	ENSCHOG00000008967	-	99	48.188	Choloepus_hoffmanni
ENSSDUG00000007045	larp7	95	54.856	ENSCHOG00000002379	-	99	52.623	Choloepus_hoffmanni
ENSSDUG00000007045	larp7	95	56.283	ENSCPBG00000004919	LARP7	99	56.304	Chrysemys_picta_bellii
ENSSDUG00000007045	larp7	95	55.556	ENSCANG00000031482	LARP7	96	56.822	Colobus_angolensis_palliatus
ENSSDUG00000007045	larp7	95	54.301	ENSCGRG00001025050	-	99	55.250	Cricetulus_griseus_chok1gshd
ENSSDUG00000007045	larp7	94	50.093	ENSCGRG00000001141	-	99	50.538	Cricetulus_griseus_crigri
ENSSDUG00000007045	larp7	100	76.283	ENSCSEG00000009088	larp7	100	76.283	Cynoglossus_semilaevis
ENSSDUG00000007045	larp7	99	73.619	ENSCVAG00000016852	larp7	90	83.092	Cyprinodon_variegatus
ENSSDUG00000007045	larp7	99	57.618	ENSDARG00000017315	larp7	98	56.918	Danio_rerio
ENSSDUG00000007045	larp7	99	54.252	ENSDNOG00000013761	LARP7	99	53.898	Dasypus_novemcinctus
ENSSDUG00000007045	larp7	95	55.273	ENSDORG00000008896	-	98	56.250	Dipodomys_ordii
ENSSDUG00000007045	larp7	56	40.341	FBgn0260771	Larp7	72	39.362	Drosophila_melanogaster
ENSSDUG00000007045	larp7	95	56.466	ENSETEG00000011692	LARP7	97	57.168	Echinops_telfairi
ENSSDUG00000007045	larp7	96	40.484	ENSEBUG00000013808	larp7	96	40.799	Eptatretus_burgeri
ENSSDUG00000007045	larp7	95	54.562	ENSEASG00005005592	LARP7	99	54.132	Equus_asinus_asinus
ENSSDUG00000007045	larp7	94	55.370	ENSEEUG00000012824	LARP7	100	55.124	Erinaceus_europaeus
ENSSDUG00000007045	larp7	100	62.862	ENSELUG00000015341	larp7	97	77.727	Esox_lucius
ENSSDUG00000007045	larp7	95	55.203	ENSFCAG00000031966	LARP7	99	55.405	Felis_catus
ENSSDUG00000007045	larp7	99	54.965	ENSFALG00000000972	LARP7	97	54.329	Ficedula_albicollis
ENSSDUG00000007045	larp7	95	55.273	ENSFDAG00000014048	-	98	55.575	Fukomys_damarensis
ENSSDUG00000007045	larp7	95	50.090	ENSFDAG00000011855	-	98	50.353	Fukomys_damarensis
ENSSDUG00000007045	larp7	99	74.956	ENSFHEG00000021652	larp7	99	74.956	Fundulus_heteroclitus
ENSSDUG00000007045	larp7	99	59.965	ENSGMOG00000010536	larp7	99	61.005	Gadus_morhua
ENSSDUG00000007045	larp7	99	54.130	ENSGALG00000012048	LARP7	99	53.626	Gallus_gallus
ENSSDUG00000007045	larp7	100	76.014	ENSGAFG00000015400	larp7	100	76.014	Gambusia_affinis
ENSSDUG00000007045	larp7	100	74.870	ENSGACG00000019618	larp7	100	74.870	Gasterosteus_aculeatus
ENSSDUG00000007045	larp7	95	55.908	ENSGAGG00000024520	LARP7	99	55.219	Gopherus_agassizii
ENSSDUG00000007045	larp7	100	79.613	ENSHBUG00000019223	larp7	100	79.613	Haplochromis_burtoni
ENSSDUG00000007045	larp7	95	53.846	ENSHGLG00000002716	LARP7	98	54.181	Heterocephalus_glaber_female
ENSSDUG00000007045	larp7	95	53.846	ENSHGLG00100000332	LARP7	98	54.181	Heterocephalus_glaber_male
ENSSDUG00000007045	larp7	98	68.036	ENSHCOG00000000664	LARP7	99	67.788	Hippocampus_comes
ENSSDUG00000007045	larp7	99	58.974	ENSIPUG00000019886	larp7	99	59.386	Ictalurus_punctatus
ENSSDUG00000007045	larp7	95	55.575	ENSJJAG00000000257	-	98	55.363	Jaculus_jaculus
ENSSDUG00000007045	larp7	100	69.177	ENSKMAG00000005057	larp7	100	69.420	Kryptolebias_marmoratus
ENSSDUG00000007045	larp7	100	78.646	ENSLBEG00000020062	larp7	100	78.472	Labrus_bergylta
ENSSDUG00000007045	larp7	98	52.094	ENSLACG00000013744	LARP7	98	52.094	Latimeria_chalumnae
ENSSDUG00000007045	larp7	100	51.629	ENSLOCG00000011608	larp7	100	50.977	Lepisosteus_oculatus
ENSSDUG00000007045	larp7	99	55.026	ENSLAFG00000015769	LARP7	99	55.366	Loxodonta_africana
ENSSDUG00000007045	larp7	100	83.245	ENSMAMG00000005835	larp7	100	83.245	Mastacembelus_armatus
ENSSDUG00000007045	larp7	100	79.438	ENSMZEG00005002084	larp7	100	79.438	Maylandia_zebra
ENSSDUG00000007045	larp7	99	54.107	ENSMGAG00000010947	LARP7	99	53.265	Meleagris_gallopavo
ENSSDUG00000007045	larp7	95	45.683	ENSMAUG00000005625	-	99	46.496	Mesocricetus_auratus
ENSSDUG00000007045	larp7	95	53.954	ENSMICG00000031035	LARP7	99	55.481	Microcebus_murinus
ENSSDUG00000007045	larp7	89	52.713	ENSMOCG00000015761	-	100	52.682	Microtus_ochrogaster
ENSSDUG00000007045	larp7	95	56.206	ENSMOCG00000012519	-	99	55.726	Microtus_ochrogaster
ENSSDUG00000007045	larp7	99	54.822	ENSMODG00000005669	LARP7	100	55.161	Monodelphis_domestica
ENSSDUG00000007045	larp7	99	55.987	ENSMPUG00000008331	-	99	55.966	Mustela_putorius_furo
ENSSDUG00000007045	larp7	95	53.860	ENSMPUG00000018052	-	100	54.845	Mustela_putorius_furo
ENSSDUG00000007045	larp7	85	54.102	ENSMLUG00000027214	LARP7	99	54.207	Myotis_lucifugus
ENSSDUG00000007045	larp7	95	53.697	ENSNGAG00000007368	-	98	54.483	Nannospalax_galili
ENSSDUG00000007045	larp7	90	52.642	ENSMEUG00000004739	LARP7	100	54.012	Notamacropus_eugenii
ENSSDUG00000007045	larp7	83	67.593	ENSOPRG00000009594	-	87	65.649	Ochotona_princeps
ENSSDUG00000007045	larp7	94	55.224	ENSODEG00000011121	LARP7	96	55.636	Octodon_degus
ENSSDUG00000007045	larp7	100	79.438	ENSONIG00000008763	larp7	100	80.141	Oreochromis_niloticus
ENSSDUG00000007045	larp7	99	55.369	ENSOANG00000009298	LARP7	99	55.369	Ornithorhynchus_anatinus
ENSSDUG00000007045	larp7	99	53.691	ENSOCUG00000007073	LARP7	99	54.653	Oryctolagus_cuniculus
ENSSDUG00000007045	larp7	95	72.812	ENSORLG00000004978	larp7	98	72.432	Oryzias_latipes
ENSSDUG00000007045	larp7	95	72.998	ENSORLG00020013825	larp7	98	72.482	Oryzias_latipes_hni
ENSSDUG00000007045	larp7	97	74.635	ENSOMEG00000006920	larp7	98	74.188	Oryzias_melastigma
ENSSDUG00000007045	larp7	95	54.724	ENSOGAG00000001643	LARP7	99	54.730	Otolemur_garnettii
ENSSDUG00000007045	larp7	99	55.109	ENSOARG00000001809	LARP7	99	55.630	Ovis_aries
ENSSDUG00000007045	larp7	95	55.106	ENSPPRG00000023256	LARP7	99	55.143	Panthera_pardus
ENSSDUG00000007045	larp7	95	54.845	ENSPTIG00000021146	LARP7	97	54.895	Panthera_tigris_altaica
ENSSDUG00000007045	larp7	99	63.542	ENSPKIG00000023484	larp7	99	62.674	Paramormyrops_kingsleyae
ENSSDUG00000007045	larp7	99	54.594	ENSPSIG00000014419	LARP7	98	55.026	Pelodiscus_sinensis
ENSSDUG00000007045	larp7	95	53.012	ENSPEMG00000013978	-	99	54.195	Peromyscus_maniculatus_bairdii
ENSSDUG00000007045	larp7	99	54.698	ENSPCIG00000020284	LARP7	96	64.348	Phascolarctos_cinereus
ENSSDUG00000007045	larp7	100	76.056	ENSPFOG00000000265	larp7	100	76.056	Poecilia_formosa
ENSSDUG00000007045	larp7	100	76.056	ENSPLAG00000012181	larp7	100	76.056	Poecilia_latipinna
ENSSDUG00000007045	larp7	100	76.056	ENSPMEG00000007182	larp7	100	76.056	Poecilia_mexicana
ENSSDUG00000007045	larp7	100	74.472	ENSPREG00000019513	larp7	100	74.472	Poecilia_reticulata
ENSSDUG00000007045	larp7	78	83.673	ENSPCOG00000023946	LARP7	89	83.673	Propithecus_coquereli
ENSSDUG00000007045	larp7	98	60.000	ENSPNAG00000017554	larp7	98	60.351	Pygocentrus_nattereri
ENSSDUG00000007045	larp7	79	54.148	ENSRBIG00000031916	LARP7	96	53.928	Rhinopithecus_bieti
ENSSDUG00000007045	larp7	95	55.477	ENSRROG00000033414	LARP7	97	56.822	Rhinopithecus_roxellana
ENSSDUG00000007045	larp7	95	42.831	ENSSBOG00000022652	-	98	43.262	Saimiri_boliviensis_boliviensis
ENSSDUG00000007045	larp7	95	54.514	ENSSBOG00000030886	-	97	56.529	Saimiri_boliviensis_boliviensis
ENSSDUG00000007045	larp7	99	55.068	ENSSHAG00000008153	LARP7	99	55.405	Sarcophilus_harrisii
ENSSDUG00000007045	larp7	98	62.124	ENSSFOG00015019344	larp7	98	62.301	Scleropages_formosus
ENSSDUG00000007045	larp7	100	86.243	ENSSMAG00000011296	larp7	100	86.243	Scophthalmus_maximus
ENSSDUG00000007045	larp7	100	82.011	ENSSPAG00000016066	larp7	100	82.011	Stegastes_partitus
ENSSDUG00000007045	larp7	95	54.930	ENSSSCG00000009119	LARP7	97	53.938	Sus_scrofa
ENSSDUG00000007045	larp7	99	55.106	ENSTGUG00000001804	LARP7	99	54.730	Taeniopygia_guttata
ENSSDUG00000007045	larp7	98	66.667	ENSTRUG00000004996	larp7	99	67.387	Takifugu_rubripes
ENSSDUG00000007045	larp7	95	59.541	ENSTNIG00000007183	larp7	98	59.965	Tetraodon_nigroviridis
ENSSDUG00000007045	larp7	95	54.448	ENSTBEG00000009188	LARP7	99	52.560	Tupaia_belangeri
ENSSDUG00000007045	larp7	89	52.919	ENSTTRG00000005233	LARP7	99	53.598	Tursiops_truncatus
ENSSDUG00000007045	larp7	95	55.282	ENSVPAG00000010502	LARP7	99	54.714	Vicugna_pacos
ENSSDUG00000007045	larp7	99	54.882	ENSXETG00000024097	larp7	99	55.051	Xenopus_tropicalis
ENSSDUG00000007045	larp7	98	75.000	ENSXCOG00000004883	larp7	96	83.732	Xiphophorus_couchianus
ENSSDUG00000007045	larp7	100	75.704	ENSXMAG00000008479	larp7	100	76.626	Xiphophorus_maculatus