EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000007054 (Gene tree)
Gene ID: 111230563
Gene Symbol: thrap3b
Alias: zgc:85716
Full Name: thyroid hormone receptor-associated protein 3-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 9036 bases
Position: chrBDQW01000273.1:79070-88105
Accession: 111230563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009614	THRAP3_BCLAF1	PF15440.6	6.3e-117	1	2
ENSSDUP00000009614	THRAP3_BCLAF1	PF15440.6	6.3e-117	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009801	-	3713	XM_022757339	ENSSDUP00000009614	893 (aa)	XP_022613060	UPI000BBE2C84

Gene Model

Click here to download ENSSDUG00000007054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007054's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000007054	thrap3b	92	41.495	ENSSDUG00000010132	thrap3a	78	42.934

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007054	thrap3b	93	86.842	ENSAPOG00000001848	thrap3b	94	86.842	Acanthochromis_polyacanthus
ENSSDUG00000007054	thrap3b	93	40.195	ENSAPOG00000024453	thrap3a	79	41.600	Acanthochromis_polyacanthus
ENSSDUG00000007054	thrap3b	76	81.606	ENSACIG00000015331	thrap3b	94	82.297	Amphilophus_citrinellus
ENSSDUG00000007054	thrap3b	94	86.445	ENSAOCG00000015572	thrap3b	93	86.380	Amphiprion_ocellaris
ENSSDUG00000007054	thrap3b	97	39.876	ENSAOCG00000014738	thrap3a	79	41.919	Amphiprion_ocellaris
ENSSDUG00000007054	thrap3b	97	39.547	ENSAPEG00000005696	thrap3a	79	42.216	Amphiprion_percula
ENSSDUG00000007054	thrap3b	94	86.445	ENSAPEG00000021862	thrap3b	93	86.380	Amphiprion_percula
ENSSDUG00000007054	thrap3b	93	38.470	ENSATEG00000009618	thrap3a	79	40.587	Anabas_testudineus
ENSSDUG00000007054	thrap3b	99	78.680	ENSATEG00000006350	thrap3b	93	82.644	Anabas_testudineus
ENSSDUG00000007054	thrap3b	94	40.278	ENSACLG00000027851	thrap3a	93	39.545	Astatotilapia_calliptera
ENSSDUG00000007054	thrap3b	94	79.335	ENSACLG00000004763	thrap3b	94	81.808	Astatotilapia_calliptera
ENSSDUG00000007054	thrap3b	93	36.853	ENSAMXG00000001863	thrap3a	77	36.727	Astyanax_mexicanus
ENSSDUG00000007054	thrap3b	93	50.055	ENSAMXG00000020877	thrap3b	83	51.599	Astyanax_mexicanus
ENSSDUG00000007054	thrap3b	66	38.626	ENSCPOG00000015742	THRAP3	67	39.882	Cavia_porcellus
ENSSDUG00000007054	thrap3b	67	39.072	ENSCPBG00000018530	THRAP3	68	38.484	Chrysemys_picta_bellii
ENSSDUG00000007054	thrap3b	54	67.059	ENSCGRG00001003105	Thrap3	72	64.286	Cricetulus_griseus_chok1gshd
ENSSDUG00000007054	thrap3b	54	67.059	ENSCGRG00000017028	Thrap3	72	64.286	Cricetulus_griseus_crigri
ENSSDUG00000007054	thrap3b	99	71.540	ENSCSEG00000010392	thrap3b	94	70.714	Cynoglossus_semilaevis
ENSSDUG00000007054	thrap3b	90	35.049	ENSCVAG00000017634	thrap3a	66	37.481	Cyprinodon_variegatus
ENSSDUG00000007054	thrap3b	94	77.594	ENSCVAG00000001547	thrap3b	94	75.445	Cyprinodon_variegatus
ENSSDUG00000007054	thrap3b	90	53.783	ENSDARG00000098228	thrap3b	99	52.035	Danio_rerio
ENSSDUG00000007054	thrap3b	92	39.321	ENSDARG00000101989	thrap3a	77	38.956	Danio_rerio
ENSSDUG00000007054	thrap3b	94	45.370	ENSELUG00000017733	thrap3a	89	64.286	Esox_lucius
ENSSDUG00000007054	thrap3b	94	60.044	ENSELUG00000007499	thrap3b	77	62.719	Esox_lucius
ENSSDUG00000007054	thrap3b	54	67.059	ENSFCAG00000014127	THRAP3	73	64.286	Felis_catus
ENSSDUG00000007054	thrap3b	76	56.522	ENSFALG00000000840	THRAP3	70	52.448	Ficedula_albicollis
ENSSDUG00000007054	thrap3b	89	37.982	ENSFHEG00000000989	thrap3a	55	38.996	Fundulus_heteroclitus
ENSSDUG00000007054	thrap3b	93	75.976	ENSFHEG00000001051	thrap3b	93	72.565	Fundulus_heteroclitus
ENSSDUG00000007054	thrap3b	76	46.392	ENSGALG00000002144	THRAP3	73	64.286	Gallus_gallus
ENSSDUG00000007054	thrap3b	53	70.124	ENSGAFG00000007090	thrap3b	82	70.576	Gambusia_affinis
ENSSDUG00000007054	thrap3b	89	35.132	ENSGAFG00000008649	thrap3a	74	36.219	Gambusia_affinis
ENSSDUG00000007054	thrap3b	93	66.629	ENSGACG00000002319	thrap3b	93	67.226	Gasterosteus_aculeatus
ENSSDUG00000007054	thrap3b	67	39.028	ENSGAGG00000024863	THRAP3	68	38.088	Gopherus_agassizii
ENSSDUG00000007054	thrap3b	94	40.300	ENSHBUG00000009602	thrap3a	97	39.565	Haplochromis_burtoni
ENSSDUG00000007054	thrap3b	94	79.454	ENSHBUG00000001708	thrap3b	94	79.436	Haplochromis_burtoni
ENSSDUG00000007054	thrap3b	94	70.081	ENSHCOG00000004098	thrap3b	94	70.058	Hippocampus_comes
ENSSDUG00000007054	thrap3b	92	35.301	ENSIPUG00000015339	thrap3a	78	36.301	Ictalurus_punctatus
ENSSDUG00000007054	thrap3b	93	51.002	ENSIPUG00000005707	thrap3b	76	51.389	Ictalurus_punctatus
ENSSDUG00000007054	thrap3b	94	77.895	ENSKMAG00000012105	thrap3b	93	76.796	Kryptolebias_marmoratus
ENSSDUG00000007054	thrap3b	91	35.017	ENSKMAG00000005707	thrap3a	77	37.199	Kryptolebias_marmoratus
ENSSDUG00000007054	thrap3b	74	41.767	ENSLBEG00000008813	thrap3a	78	41.296	Labrus_bergylta
ENSSDUG00000007054	thrap3b	94	79.314	ENSLBEG00000017803	thrap3b	94	79.551	Labrus_bergylta
ENSSDUG00000007054	thrap3b	68	38.978	ENSLACG00000018229	THRAP3	67	38.261	Latimeria_chalumnae
ENSSDUG00000007054	thrap3b	50	38.330	ENSMNEG00000042630	-	67	42.703	Macaca_nemestrina
ENSSDUG00000007054	thrap3b	93	38.976	ENSMAMG00000007707	thrap3a	75	40.928	Mastacembelus_armatus
ENSSDUG00000007054	thrap3b	94	77.988	ENSMAMG00000004348	thrap3b	93	77.988	Mastacembelus_armatus
ENSSDUG00000007054	thrap3b	94	40.278	ENSMZEG00005007212	thrap3a	97	39.545	Maylandia_zebra
ENSSDUG00000007054	thrap3b	94	78.588	ENSMZEG00005026309	thrap3b	94	81.904	Maylandia_zebra
ENSSDUG00000007054	thrap3b	57	46.392	ENSMGAG00000003640	THRAP3	63	34.683	Meleagris_gallopavo
ENSSDUG00000007054	thrap3b	66	38.863	ENSMAUG00000019723	Thrap3	67	39.704	Mesocricetus_auratus
ENSSDUG00000007054	thrap3b	94	68.000	ENSMMOG00000013594	thrap3b	84	77.620	Mola_mola
ENSSDUG00000007054	thrap3b	72	40.313	ENSMMOG00000018587	thrap3a	72	37.749	Mola_mola
ENSSDUG00000007054	thrap3b	82	53.279	ENSMALG00000011980	thrap3a	92	34.763	Monopterus_albus
ENSSDUG00000007054	thrap3b	93	83.194	ENSMALG00000012582	thrap3b	93	82.241	Monopterus_albus
ENSSDUG00000007054	thrap3b	66	40.615	ENSMUSG00000043962	Thrap3	61	64.286	Mus_musculus
ENSSDUG00000007054	thrap3b	68	40.271	MGP_PahariEiJ_G0028802	-	61	60.241	Mus_pahari
ENSSDUG00000007054	thrap3b	76	62.353	MGP_SPRETEiJ_G0027450	Thrap3	71	64.286	Mus_spretus
ENSSDUG00000007054	thrap3b	94	39.507	ENSNBRG00000009991	thrap3a	96	38.955	Neolamprologus_brichardi
ENSSDUG00000007054	thrap3b	94	76.443	ENSNBRG00000014237	thrap3b	98	79.225	Neolamprologus_brichardi
ENSSDUG00000007054	thrap3b	93	39.594	ENSONIG00000016278	thrap3a	92	32.823	Oreochromis_niloticus
ENSSDUG00000007054	thrap3b	99	72.737	ENSONIG00000013673	thrap3b	94	79.436	Oreochromis_niloticus
ENSSDUG00000007054	thrap3b	94	75.532	ENSORLG00000009543	thrap3b	94	72.459	Oryzias_latipes
ENSSDUG00000007054	thrap3b	91	36.445	ENSORLG00000014550	thrap3a	51	37.554	Oryzias_latipes
ENSSDUG00000007054	thrap3b	91	35.658	ENSORLG00020019116	thrap3a	51	37.339	Oryzias_latipes_hni
ENSSDUG00000007054	thrap3b	94	75.797	ENSORLG00020016319	thrap3b	94	73.790	Oryzias_latipes_hni
ENSSDUG00000007054	thrap3b	94	75.296	ENSORLG00015007831	thrap3b	94	72.340	Oryzias_latipes_hsok
ENSSDUG00000007054	thrap3b	91	36.292	ENSORLG00015004215	thrap3a	52	37.474	Oryzias_latipes_hsok
ENSSDUG00000007054	thrap3b	91	75.758	ENSOMEG00000005716	thrap3b	94	71.395	Oryzias_melastigma
ENSSDUG00000007054	thrap3b	66	36.180	ENSOGAG00000002648	THRAP3	66	35.725	Otolemur_garnettii
ENSSDUG00000007054	thrap3b	54	67.059	ENSPPRG00000001735	THRAP3	68	39.213	Panthera_pardus
ENSSDUG00000007054	thrap3b	54	67.059	ENSPTIG00000016888	THRAP3	68	39.213	Panthera_tigris_altaica
ENSSDUG00000007054	thrap3b	68	45.353	ENSPKIG00000003697	thrap3b	67	44.136	Paramormyrops_kingsleyae
ENSSDUG00000007054	thrap3b	73	51.163	ENSPKIG00000005150	thrap3a	79	50.798	Paramormyrops_kingsleyae
ENSSDUG00000007054	thrap3b	68	45.361	ENSPSIG00000010296	THRAP3	56	34.057	Pelodiscus_sinensis
ENSSDUG00000007054	thrap3b	76	67.059	ENSPCIG00000024805	THRAP3	73	64.286	Phascolarctos_cinereus
ENSSDUG00000007054	thrap3b	93	74.438	ENSPFOG00000000525	thrap3b	94	71.938	Poecilia_formosa
ENSSDUG00000007054	thrap3b	89	37.428	ENSPFOG00000013297	thrap3a	72	37.300	Poecilia_formosa
ENSSDUG00000007054	thrap3b	89	37.826	ENSPLAG00000000635	thrap3a	72	37.571	Poecilia_latipinna
ENSSDUG00000007054	thrap3b	93	74.556	ENSPLAG00000016521	thrap3b	94	72.057	Poecilia_latipinna
ENSSDUG00000007054	thrap3b	89	36.652	ENSPMEG00000019022	thrap3a	72	37.607	Poecilia_mexicana
ENSSDUG00000007054	thrap3b	93	75.059	ENSPMEG00000009021	thrap3b	94	73.270	Poecilia_mexicana
ENSSDUG00000007054	thrap3b	93	75.265	ENSPREG00000009927	thrap3b	94	72.609	Poecilia_reticulata
ENSSDUG00000007054	thrap3b	93	37.542	ENSPREG00000005816	thrap3a	72	37.936	Poecilia_reticulata
ENSSDUG00000007054	thrap3b	52	44.375	ENSPPYG00000001544	-	74	47.477	Pongo_abelii
ENSSDUG00000007054	thrap3b	94	40.558	ENSPNYG00000013314	thrap3a	93	39.545	Pundamilia_nyererei
ENSSDUG00000007054	thrap3b	94	76.071	ENSPNYG00000003062	thrap3b	80	76.596	Pundamilia_nyererei
ENSSDUG00000007054	thrap3b	95	49.561	ENSPNAG00000028762	thrap3b	80	51.595	Pygocentrus_nattereri
ENSSDUG00000007054	thrap3b	73	39.178	ENSPNAG00000015136	thrap3a	77	39.344	Pygocentrus_nattereri
ENSSDUG00000007054	thrap3b	77	48.114	ENSSFOG00015020057	thrap3	77	48.568	Scleropages_formosus
ENSSDUG00000007054	thrap3b	74	41.019	ENSSMAG00000003703	thrap3a	73	41.565	Scophthalmus_maximus
ENSSDUG00000007054	thrap3b	94	83.510	ENSSMAG00000001259	thrap3b	94	84.452	Scophthalmus_maximus
ENSSDUG00000007054	thrap3b	92	41.349	ENSSLDG00000003306	thrap3a	73	43.629	Seriola_lalandi_dorsalis
ENSSDUG00000007054	thrap3b	100	99.442	ENSSLDG00000009210	thrap3b	100	99.442	Seriola_lalandi_dorsalis
ENSSDUG00000007054	thrap3b	76	67.059	ENSSARG00000006424	THRAP3	72	64.286	Sorex_araneus
ENSSDUG00000007054	thrap3b	77	63.918	ENSSPUG00000001120	THRAP3	50	66.071	Sphenodon_punctatus
ENSSDUG00000007054	thrap3b	62	89.127	ENSSPAG00000009248	thrap3b	99	88.770	Stegastes_partitus
ENSSDUG00000007054	thrap3b	76	46.392	ENSTGUG00000001606	THRAP3	68	38.075	Taeniopygia_guttata
ENSSDUG00000007054	thrap3b	90	35.023	ENSTRUG00000010702	thrap3a	54	36.542	Takifugu_rubripes
ENSSDUG00000007054	thrap3b	94	69.668	ENSTRUG00000010336	thrap3b	93	66.071	Takifugu_rubripes
ENSSDUG00000007054	thrap3b	94	61.446	ENSTNIG00000004582	thrap3b	93	59.031	Tetraodon_nigroviridis
ENSSDUG00000007054	thrap3b	85	68.564	ENSXCOG00000018772	thrap3b	91	66.840	Xiphophorus_couchianus
ENSSDUG00000007054	thrap3b	89	36.812	ENSXMAG00000014797	thrap3a	72	37.374	Xiphophorus_maculatus
ENSSDUG00000007054	thrap3b	93	74.763	ENSXMAG00000017962	thrap3b	93	72.143	Xiphophorus_maculatus