EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000007057 (Gene tree)
Gene ID: 111221528
Gene Symbol: -
Alias: -
Full Name: helicase with zinc finger 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 22932 bases
Position: chrBDQW01000088.1:639528-662459
Accession: 111221528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009607	RNB	PF00773.19	6.3e-56	1	1
ENSSDUP00000009607	ResIII	PF04851.15	9.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009794	-	10071	XM_022744957	ENSSDUP00000009607	2900 (aa)	XP_022600678	UPI000BBE83BB

Gene Model

Click here to download ENSSDUG00000007057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007057	-	99	71.674	ENSAPOG00000023564	-	100	71.674	Acanthochromis_polyacanthus
ENSSDUG00000007057	-	99	68.068	ENSACIG00000009644	-	99	68.068	Amphilophus_citrinellus
ENSSDUG00000007057	-	99	72.718	ENSAOCG00000005001	-	99	72.718	Amphiprion_ocellaris
ENSSDUG00000007057	-	99	72.615	ENSAPEG00000002204	-	99	72.615	Amphiprion_percula
ENSSDUG00000007057	-	100	76.952	ENSATEG00000002831	-	100	76.952	Anabas_testudineus
ENSSDUG00000007057	-	100	71.429	ENSACLG00000026636	-	100	72.538	Astatotilapia_calliptera
ENSSDUG00000007057	-	99	64.754	ENSCSEG00000013505	-	99	64.754	Cynoglossus_semilaevis
ENSSDUG00000007057	-	99	60.308	ENSCVAG00000009143	-	97	60.308	Cyprinodon_variegatus
ENSSDUG00000007057	-	87	55.437	ENSGMOG00000015715	-	100	55.397	Gadus_morhua
ENSSDUG00000007057	-	87	68.561	ENSGACG00000011518	-	99	68.483	Gasterosteus_aculeatus
ENSSDUG00000007057	-	100	71.531	ENSHBUG00000011353	-	100	71.394	Haplochromis_burtoni
ENSSDUG00000007057	-	99	68.793	ENSKMAG00000017824	-	100	68.759	Kryptolebias_marmoratus
ENSSDUG00000007057	-	99	66.992	ENSLBEG00000004602	-	98	67.158	Labrus_bergylta
ENSSDUG00000007057	-	100	74.424	ENSMAMG00000023766	-	100	74.321	Mastacembelus_armatus
ENSSDUG00000007057	-	100	71.600	ENSMZEG00005005021	-	100	71.463	Maylandia_zebra
ENSSDUG00000007057	-	99	78.156	ENSMALG00000015934	-	99	78.156	Monopterus_albus
ENSSDUG00000007057	-	99	66.523	ENSNBRG00000018910	-	99	66.380	Neolamprologus_brichardi
ENSSDUG00000007057	-	99	69.193	ENSONIG00000003110	-	99	69.051	Oreochromis_niloticus
ENSSDUG00000007057	-	99	62.547	ENSORLG00000010672	-	100	62.479	Oryzias_latipes
ENSSDUG00000007057	-	99	62.205	ENSORLG00020004477	-	100	62.170	Oryzias_latipes_hni
ENSSDUG00000007057	-	99	62.581	ENSORLG00015022035	-	100	62.513	Oryzias_latipes_hsok
ENSSDUG00000007057	-	99	61.396	ENSOMEG00000001349	-	99	61.328	Oryzias_melastigma
ENSSDUG00000007057	-	81	61.615	ENSPFOG00000001606	-	100	62.442	Poecilia_formosa
ENSSDUG00000007057	-	99	58.580	ENSPLAG00000011020	-	98	58.580	Poecilia_latipinna
ENSSDUG00000007057	-	99	63.530	ENSPMEG00000014289	-	99	63.496	Poecilia_mexicana
ENSSDUG00000007057	-	87	61.460	ENSPREG00000013870	-	100	61.421	Poecilia_reticulata
ENSSDUG00000007057	-	100	71.497	ENSPNYG00000007526	-	100	71.360	Pundamilia_nyererei
ENSSDUG00000007057	-	99	91.017	ENSSLDG00000020104	-	99	94.970	Seriola_lalandi_dorsalis
ENSSDUG00000007057	-	99	73.132	ENSSPAG00000003658	-	99	73.132	Stegastes_partitus
ENSSDUG00000007057	-	67	60.948	ENSTRUG00000009427	-	98	60.948	Takifugu_rubripes
ENSSDUG00000007057	-	87	61.025	ENSTNIG00000003119	-	100	61.025	Tetraodon_nigroviridis
ENSSDUG00000007057	-	99	60.642	ENSXCOG00000003833	-	99	60.535	Xiphophorus_couchianus
ENSSDUG00000007057	-	99	60.478	ENSXMAG00000009019	-	99	60.371	Xiphophorus_maculatus