EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000007090 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 2109 bases
Position: chrBDQW01000273.1:98228-100336
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009651	LSM	PF01423.22	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009838	-	372	-	ENSSDUP00000009651	123 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000007090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007090's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000007090	oscp1a	58	32.394	ENSSDUG00000010521	snrpd1	81	30.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007090	oscp1a	99	63.115	ENSG00000181817	LSM10	98	63.115	Homo_sapiens
ENSSDUG00000007090	oscp1a	98	64.463	ENSAMEG00000019854	LSM10	98	64.463	Ailuropoda_melanoleuca
ENSSDUG00000007090	oscp1a	96	82.203	ENSACIG00000015420	oscp1a	78	82.203	Amphilophus_citrinellus
ENSSDUG00000007090	oscp1a	83	82.353	ENSAOCG00000015607	LSM10	79	82.353	Amphiprion_ocellaris
ENSSDUG00000007090	oscp1a	97	81.513	ENSAOCG00000014654	-	98	81.513	Amphiprion_ocellaris
ENSSDUG00000007090	oscp1a	97	81.513	ENSAOCG00000015618	LSM10	98	81.513	Amphiprion_ocellaris
ENSSDUG00000007090	oscp1a	83	82.353	ENSAPEG00000021851	LSM10	79	82.353	Amphiprion_percula
ENSSDUG00000007090	oscp1a	97	81.513	ENSAPEG00000021845	-	98	81.513	Amphiprion_percula
ENSSDUG00000007090	oscp1a	92	80.531	ENSATEG00000006310	oscp1a	84	80.531	Anabas_testudineus
ENSSDUG00000007090	oscp1a	100	57.258	ENSACAG00000001231	LSM10	100	57.258	Anolis_carolinensis
ENSSDUG00000007090	oscp1a	100	61.789	ENSANAG00000031489	-	100	61.789	Aotus_nancymaae
ENSSDUG00000007090	oscp1a	100	63.415	ENSANAG00000018759	-	99	63.415	Aotus_nancymaae
ENSSDUG00000007090	oscp1a	100	82.927	ENSACLG00000004728	oscp1a	100	82.927	Astatotilapia_calliptera
ENSSDUG00000007090	oscp1a	95	74.359	ENSAMXG00000025301	oscp1a	97	74.359	Astyanax_mexicanus
ENSSDUG00000007090	oscp1a	100	63.415	ENSBTAG00000024096	LSM10	100	63.415	Bos_taurus
ENSSDUG00000007090	oscp1a	100	63.415	ENSCJAG00000044880	LSM10	99	63.415	Callithrix_jacchus
ENSSDUG00000007090	oscp1a	98	64.463	ENSCAFG00000003382	LSM10	98	64.463	Canis_familiaris
ENSSDUG00000007090	oscp1a	98	64.463	ENSCAFG00020008920	LSM10	98	64.463	Canis_lupus_dingo
ENSSDUG00000007090	oscp1a	100	63.415	ENSCHIG00000009398	LSM10	100	63.415	Capra_hircus
ENSSDUG00000007090	oscp1a	98	65.289	ENSCAPG00000012567	LSM10	98	65.289	Cavia_aperea
ENSSDUG00000007090	oscp1a	98	65.289	ENSCPOG00000039302	LSM10	98	65.289	Cavia_porcellus
ENSSDUG00000007090	oscp1a	100	61.789	ENSCCAG00000008378	-	99	61.789	Cebus_capucinus
ENSSDUG00000007090	oscp1a	100	63.415	ENSCCAG00000018913	-	99	63.415	Cebus_capucinus
ENSSDUG00000007090	oscp1a	95	63.248	ENSCATG00000006589	LSM10	95	63.248	Cercocebus_atys
ENSSDUG00000007090	oscp1a	98	63.636	ENSCLAG00000008633	LSM10	98	63.636	Chinchilla_lanigera
ENSSDUG00000007090	oscp1a	95	63.248	ENSCSAG00000000134	LSM10	95	63.248	Chlorocebus_sabaeus
ENSSDUG00000007090	oscp1a	98	61.789	ENSCHOG00000008615	LSM10	98	61.789	Choloepus_hoffmanni
ENSSDUG00000007090	oscp1a	80	30.612	ENSCSAVG00000001896	-	84	30.612	Ciona_savignyi
ENSSDUG00000007090	oscp1a	95	63.248	ENSCANG00000019928	LSM10	95	63.248	Colobus_angolensis_palliatus
ENSSDUG00000007090	oscp1a	94	64.655	ENSCGRG00001004317	-	95	64.655	Cricetulus_griseus_chok1gshd
ENSSDUG00000007090	oscp1a	86	60.185	ENSCGRG00001022673	-	88	60.185	Cricetulus_griseus_chok1gshd
ENSSDUG00000007090	oscp1a	94	64.655	ENSCGRG00000014935	-	95	64.655	Cricetulus_griseus_crigri
ENSSDUG00000007090	oscp1a	86	60.185	ENSCGRG00000015514	-	88	60.185	Cricetulus_griseus_crigri
ENSSDUG00000007090	oscp1a	94	81.897	ENSCSEG00000010374	oscp1a	77	82.609	Cynoglossus_semilaevis
ENSSDUG00000007090	oscp1a	94	77.586	ENSCVAG00000001536	oscp1a	88	77.586	Cyprinodon_variegatus
ENSSDUG00000007090	oscp1a	66	74.074	ENSDARG00000109563	CABZ01074453.1	94	74.074	Danio_rerio
ENSSDUG00000007090	oscp1a	94	73.276	ENSDARG00000101222	oscp1a	96	73.276	Danio_rerio
ENSSDUG00000007090	oscp1a	99	65.574	ENSDNOG00000036662	LSM10	98	65.574	Dasypus_novemcinctus
ENSSDUG00000007090	oscp1a	94	66.379	ENSDORG00000007579	Lsm10	94	66.379	Dipodomys_ordii
ENSSDUG00000007090	oscp1a	96	66.387	ENSETEG00000005703	LSM10	97	66.387	Echinops_telfairi
ENSSDUG00000007090	oscp1a	93	49.565	ENSEBUG00000001312	oscp1a	94	49.565	Eptatretus_burgeri
ENSSDUG00000007090	oscp1a	98	64.463	ENSEASG00005012194	LSM10	98	64.463	Equus_asinus_asinus
ENSSDUG00000007090	oscp1a	98	64.463	ENSECAG00000005071	LSM10	98	64.463	Equus_caballus
ENSSDUG00000007090	oscp1a	98	63.636	ENSEEUG00000012032	LSM10	98	63.636	Erinaceus_europaeus
ENSSDUG00000007090	oscp1a	94	79.310	ENSELUG00000007452	oscp1a	95	79.310	Esox_lucius
ENSSDUG00000007090	oscp1a	96	64.407	ENSFALG00000000851	LSM10	95	64.407	Ficedula_albicollis
ENSSDUG00000007090	oscp1a	98	64.463	ENSFDAG00000021056	LSM10	98	64.463	Fukomys_damarensis
ENSSDUG00000007090	oscp1a	93	73.913	ENSFHEG00000001058	oscp1a	99	73.913	Fundulus_heteroclitus
ENSSDUG00000007090	oscp1a	95	66.667	ENSGMOG00000019832	oscp1a	98	66.667	Gadus_morhua
ENSSDUG00000007090	oscp1a	98	64.167	ENSGALG00000002127	LSM10	97	64.167	Gallus_gallus
ENSSDUG00000007090	oscp1a	85	66.667	ENSGAFG00000016445	oscp1a	85	66.667	Gambusia_affinis
ENSSDUG00000007090	oscp1a	97	82.353	ENSGACG00000002329	oscp1a	98	82.353	Gasterosteus_aculeatus
ENSSDUG00000007090	oscp1a	97	62.185	ENSGAGG00000024848	LSM10	96	62.185	Gopherus_agassizii
ENSSDUG00000007090	oscp1a	99	63.115	ENSGGOG00000003556	LSM10	98	63.115	Gorilla_gorilla
ENSSDUG00000007090	oscp1a	100	83.740	ENSHBUG00000001722	oscp1a	100	83.740	Haplochromis_burtoni
ENSSDUG00000007090	oscp1a	98	63.636	ENSHGLG00000011625	LSM10	98	63.636	Heterocephalus_glaber_female
ENSSDUG00000007090	oscp1a	98	63.636	ENSHGLG00100001769	LSM10	98	63.636	Heterocephalus_glaber_male
ENSSDUG00000007090	oscp1a	84	71.845	ENSIPUG00000005808	oscp1a	90	71.845	Ictalurus_punctatus
ENSSDUG00000007090	oscp1a	98	64.463	ENSSTOG00000000606	LSM10	98	64.463	Ictidomys_tridecemlineatus
ENSSDUG00000007090	oscp1a	96	79.661	ENSKMAG00000012143	oscp1a	98	79.661	Kryptolebias_marmoratus
ENSSDUG00000007090	oscp1a	93	80.702	ENSLBEG00000017764	oscp1a	93	80.702	Labrus_bergylta
ENSSDUG00000007090	oscp1a	93	63.158	ENSLACG00000015904	LSM10	88	63.158	Latimeria_chalumnae
ENSSDUG00000007090	oscp1a	96	71.186	ENSLOCG00000018277	oscp1a	97	71.186	Lepisosteus_oculatus
ENSSDUG00000007090	oscp1a	95	64.957	ENSLAFG00000009600	LSM10	95	64.957	Loxodonta_africana
ENSSDUG00000007090	oscp1a	95	63.248	ENSMFAG00000009115	LSM10	95	63.248	Macaca_fascicularis
ENSSDUG00000007090	oscp1a	95	63.248	ENSMMUG00000017338	LSM10	95	63.248	Macaca_mulatta
ENSSDUG00000007090	oscp1a	95	63.248	ENSMNEG00000020023	LSM10	95	63.248	Macaca_nemestrina
ENSSDUG00000007090	oscp1a	95	63.248	ENSMLEG00000025150	LSM10	95	63.248	Mandrillus_leucophaeus
ENSSDUG00000007090	oscp1a	96	79.661	ENSMAMG00000004427	oscp1a	97	79.661	Mastacembelus_armatus
ENSSDUG00000007090	oscp1a	100	82.927	ENSMZEG00005026307	oscp1a	100	82.927	Maylandia_zebra
ENSSDUG00000007090	oscp1a	98	62.500	ENSMGAG00000015707	LSM10	97	62.500	Meleagris_gallopavo
ENSSDUG00000007090	oscp1a	94	64.655	ENSMAUG00000016624	Lsm10	95	64.655	Mesocricetus_auratus
ENSSDUG00000007090	oscp1a	94	63.793	ENSMOCG00000021943	Lsm10	95	63.793	Microtus_ochrogaster
ENSSDUG00000007090	oscp1a	90	82.883	ENSMMOG00000013597	oscp1a	83	82.883	Mola_mola
ENSSDUG00000007090	oscp1a	100	67.742	ENSMODG00000023328	LSM10	100	67.742	Monodelphis_domestica
ENSSDUG00000007090	oscp1a	52	81.250	ENSMALG00000012661	oscp1a	50	81.250	Monopterus_albus
ENSSDUG00000007090	oscp1a	94	64.655	MGP_CAROLIEiJ_G0026467	Lsm10	96	67.416	Mus_caroli
ENSSDUG00000007090	oscp1a	94	64.655	ENSMUSG00000050188	Lsm10	96	67.416	Mus_musculus
ENSSDUG00000007090	oscp1a	94	64.655	MGP_PahariEiJ_G0028798	Lsm10	96	67.416	Mus_pahari
ENSSDUG00000007090	oscp1a	94	64.655	MGP_SPRETEiJ_G0027446	Lsm10	96	67.416	Mus_spretus
ENSSDUG00000007090	oscp1a	98	64.463	ENSMPUG00000018593	LSM10	98	64.463	Mustela_putorius_furo
ENSSDUG00000007090	oscp1a	98	63.636	ENSMLUG00000023895	LSM10	98	63.636	Myotis_lucifugus
ENSSDUG00000007090	oscp1a	94	63.793	ENSNGAG00000015011	Lsm10	94	63.793	Nannospalax_galili
ENSSDUG00000007090	oscp1a	96	85.593	ENSNBRG00000014306	oscp1a	96	85.593	Neolamprologus_brichardi
ENSSDUG00000007090	oscp1a	99	63.115	ENSNLEG00000033754	LSM10	98	63.115	Nomascus_leucogenys
ENSSDUG00000007090	oscp1a	98	66.942	ENSMEUG00000006313	LSM10	98	66.942	Notamacropus_eugenii
ENSSDUG00000007090	oscp1a	94	62.931	ENSOPRG00000001699	LSM10	94	62.931	Ochotona_princeps
ENSSDUG00000007090	oscp1a	98	63.636	ENSODEG00000019161	LSM10	98	63.636	Octodon_degus
ENSSDUG00000007090	oscp1a	96	85.593	ENSONIG00000020904	oscp1a	97	85.593	Oreochromis_niloticus
ENSSDUG00000007090	oscp1a	98	65.289	ENSOANG00000002066	LSM10	98	65.289	Ornithorhynchus_anatinus
ENSSDUG00000007090	oscp1a	98	61.983	ENSOCUG00000005333	LSM10	98	61.983	Oryctolagus_cuniculus
ENSSDUG00000007090	oscp1a	96	77.119	ENSORLG00000009504	oscp1a	98	77.119	Oryzias_latipes
ENSSDUG00000007090	oscp1a	96	77.119	ENSORLG00020016201	oscp1a	98	77.119	Oryzias_latipes_hni
ENSSDUG00000007090	oscp1a	96	75.424	ENSORLG00015007794	oscp1a	97	75.424	Oryzias_latipes_hsok
ENSSDUG00000007090	oscp1a	98	65.289	ENSOGAG00000002653	LSM10	98	65.289	Otolemur_garnettii
ENSSDUG00000007090	oscp1a	100	63.415	ENSOARG00000009596	LSM10	100	63.415	Ovis_aries
ENSSDUG00000007090	oscp1a	99	63.115	ENSPPAG00000023465	LSM10	98	63.115	Pan_paniscus
ENSSDUG00000007090	oscp1a	98	64.463	ENSPPRG00000014619	LSM10	98	64.463	Panthera_pardus
ENSSDUG00000007090	oscp1a	98	64.463	ENSPTIG00000004613	LSM10	98	64.463	Panthera_tigris_altaica
ENSSDUG00000007090	oscp1a	99	63.115	ENSPTRG00000000539	LSM10	98	63.115	Pan_troglodytes
ENSSDUG00000007090	oscp1a	95	63.248	ENSPANG00000023172	LSM10	95	63.248	Papio_anubis
ENSSDUG00000007090	oscp1a	94	70.690	ENSPKIG00000003728	oscp1a	94	70.690	Paramormyrops_kingsleyae
ENSSDUG00000007090	oscp1a	97	61.345	ENSPSIG00000000590	LSM10	96	61.345	Pelodiscus_sinensis
ENSSDUG00000007090	oscp1a	60	68.919	ENSPMGG00000015718	oscp1a	96	68.919	Periophthalmus_magnuspinnatus
ENSSDUG00000007090	oscp1a	85	70.192	ENSPCIG00000014865	LSM10	76	70.192	Phascolarctos_cinereus
ENSSDUG00000007090	oscp1a	93	67.544	ENSPFOG00000020490	oscp1a	97	67.544	Poecilia_formosa
ENSSDUG00000007090	oscp1a	95	66.667	ENSPLAG00000016537	oscp1a	89	66.667	Poecilia_latipinna
ENSSDUG00000007090	oscp1a	92	67.257	ENSPMEG00000000174	oscp1a	98	67.257	Poecilia_mexicana
ENSSDUG00000007090	oscp1a	95	67.521	ENSPREG00000009899	oscp1a	89	67.521	Poecilia_reticulata
ENSSDUG00000007090	oscp1a	99	63.115	ENSPPYG00000001539	LSM10	98	63.115	Pongo_abelii
ENSSDUG00000007090	oscp1a	96	63.559	ENSPCAG00000002520	LSM10	97	63.559	Procavia_capensis
ENSSDUG00000007090	oscp1a	98	64.463	ENSPVAG00000008644	LSM10	98	64.463	Pteropus_vampyrus
ENSSDUG00000007090	oscp1a	100	83.740	ENSPNYG00000003138	oscp1a	100	83.740	Pundamilia_nyererei
ENSSDUG00000007090	oscp1a	97	78.992	ENSPNAG00000028829	oscp1a	98	78.992	Pygocentrus_nattereri
ENSSDUG00000007090	oscp1a	94	63.793	ENSRNOG00000025716	Lsm10	95	63.793	Rattus_norvegicus
ENSSDUG00000007090	oscp1a	95	63.248	ENSRBIG00000001561	LSM10	95	63.248	Rhinopithecus_bieti
ENSSDUG00000007090	oscp1a	95	63.248	ENSRROG00000011414	LSM10	95	63.248	Rhinopithecus_roxellana
ENSSDUG00000007090	oscp1a	100	63.415	ENSSBOG00000036413	-	99	63.415	Saimiri_boliviensis_boliviensis
ENSSDUG00000007090	oscp1a	98	66.942	ENSSHAG00000018056	LSM10	98	66.942	Sarcophilus_harrisii
ENSSDUG00000007090	oscp1a	94	70.690	ENSSFOG00015019954	lsm10	95	70.690	Scleropages_formosus
ENSSDUG00000007090	oscp1a	95	85.470	ENSSMAG00000001297	oscp1a	100	85.470	Scophthalmus_maximus
ENSSDUG00000007090	oscp1a	98	97.521	ENSSLDG00000000800	oscp1a	100	97.521	Seriola_lalandi_dorsalis
ENSSDUG00000007090	oscp1a	88	66.667	ENSSARG00000004211	LSM10	98	63.415	Sorex_araneus
ENSSDUG00000007090	oscp1a	96	82.203	ENSSPAG00000009229	oscp1a	98	82.203	Stegastes_partitus
ENSSDUG00000007090	oscp1a	100	63.415	ENSSSCG00000038916	LSM10	99	63.415	Sus_scrofa
ENSSDUG00000007090	oscp1a	97	65.546	ENSTGUG00000001602	-	97	65.546	Taeniopygia_guttata
ENSSDUG00000007090	oscp1a	97	64.706	ENSTGUG00000001600	-	97	64.706	Taeniopygia_guttata
ENSSDUG00000007090	oscp1a	93	78.261	ENSTRUG00000010531	oscp1a	93	78.261	Takifugu_rubripes
ENSSDUG00000007090	oscp1a	96	62.712	ENSTBEG00000016674	LSM10	96	62.712	Tupaia_belangeri
ENSSDUG00000007090	oscp1a	98	64.463	ENSUAMG00000020265	LSM10	98	64.463	Ursus_americanus
ENSSDUG00000007090	oscp1a	98	64.463	ENSUMAG00000001438	LSM10	55	64.463	Ursus_maritimus
ENSSDUG00000007090	oscp1a	98	64.463	ENSVVUG00000023209	LSM10	98	64.463	Vulpes_vulpes
ENSSDUG00000007090	oscp1a	98	60.331	ENSXETG00000027631	lsm10	98	60.331	Xenopus_tropicalis
ENSSDUG00000007090	oscp1a	95	67.521	ENSXCOG00000018776	oscp1a	74	67.521	Xiphophorus_couchianus
ENSSDUG00000007090	oscp1a	95	67.521	ENSXMAG00000019963	oscp1a	92	67.521	Xiphophorus_maculatus