EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000007092 (Gene tree)
Gene ID: 111218742
Gene Symbol: sympk
Alias: si:dkeyp-117b8.1
Full Name: symplekin
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 11332 bases
Position: chrBDQW01000052.1:1291491-1302822
Accession: 111218742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009650	Symplekin_C	PF12295.8	2e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009840	-	4614	XM_022741182	ENSSDUP00000009650	1222 (aa)	XP_022596903	UPI000BBF3AA7

Gene Model

Click here to download ENSSDUG00000007092's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03015	mRNA surveillance pathway	KEGG
sdu04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007092's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007092	sympk	91	74.619	ENSG00000125755	SYMPK	80	86.726	Homo_sapiens
ENSSDUG00000007092	sympk	100	92.816	ENSAPOG00000015934	sympk	100	92.816	Acanthochromis_polyacanthus
ENSSDUG00000007092	sympk	91	74.371	ENSAMEG00000000680	SYMPK	93	70.559	Ailuropoda_melanoleuca
ENSSDUG00000007092	sympk	89	94.275	ENSACIG00000006357	sympk	99	88.123	Amphilophus_citrinellus
ENSSDUG00000007092	sympk	100	92.898	ENSAOCG00000024124	sympk	100	93.306	Amphiprion_ocellaris
ENSSDUG00000007092	sympk	100	92.980	ENSAPEG00000003465	sympk	100	93.143	Amphiprion_percula
ENSSDUG00000007092	sympk	100	92.320	ENSATEG00000008472	sympk	100	92.320	Anabas_testudineus
ENSSDUG00000007092	sympk	81	74.598	ENSACAG00000004126	SYMPK	83	74.598	Anolis_carolinensis
ENSSDUG00000007092	sympk	91	74.640	ENSANAG00000021087	SYMPK	97	75.477	Aotus_nancymaae
ENSSDUG00000007092	sympk	100	90.000	ENSACLG00000001813	sympk	100	90.000	Astatotilapia_calliptera
ENSSDUG00000007092	sympk	92	81.914	ENSAMXG00000013677	sympk	95	81.261	Astyanax_mexicanus
ENSSDUG00000007092	sympk	90	74.414	ENSBTAG00000012101	SYMPK	87	74.260	Bos_taurus
ENSSDUG00000007092	sympk	90	75.205	ENSCJAG00000012172	SYMPK	97	73.855	Callithrix_jacchus
ENSSDUG00000007092	sympk	91	74.550	ENSCAFG00000004376	SYMPK	93	70.809	Canis_familiaris
ENSSDUG00000007092	sympk	91	74.550	ENSCAFG00020001815	SYMPK	93	70.809	Canis_lupus_dingo
ENSSDUG00000007092	sympk	90	74.505	ENSCHIG00000026784	SYMPK	87	74.350	Capra_hircus
ENSSDUG00000007092	sympk	91	74.640	ENSTSYG00000006268	SYMPK	95	73.800	Carlito_syrichta
ENSSDUG00000007092	sympk	86	72.917	ENSCAPG00000005112	SYMPK	94	72.917	Cavia_aperea
ENSSDUG00000007092	sympk	91	74.350	ENSCPOG00000010434	SYMPK	89	74.350	Cavia_porcellus
ENSSDUG00000007092	sympk	91	74.640	ENSCCAG00000036309	SYMPK	97	75.260	Cebus_capucinus
ENSSDUG00000007092	sympk	91	74.730	ENSCATG00000045107	SYMPK	98	75.236	Cercocebus_atys
ENSSDUG00000007092	sympk	91	74.170	ENSCLAG00000001206	SYMPK	92	70.642	Chinchilla_lanigera
ENSSDUG00000007092	sympk	91	74.730	ENSCSAG00000003115	SYMPK	92	71.107	Chlorocebus_sabaeus
ENSSDUG00000007092	sympk	68	90.909	ENSCHOG00000012456	SYMPK	75	90.909	Choloepus_hoffmanni
ENSSDUG00000007092	sympk	90	75.725	ENSCPBG00000007170	SYMPK	94	71.369	Chrysemys_picta_bellii
ENSSDUG00000007092	sympk	87	48.694	ENSCING00000021232	-	97	48.742	Ciona_intestinalis
ENSSDUG00000007092	sympk	85	47.736	ENSCSAVG00000005154	-	100	48.208	Ciona_savignyi
ENSSDUG00000007092	sympk	91	73.238	ENSCANG00000040907	SYMPK	97	73.315	Colobus_angolensis_palliatus
ENSSDUG00000007092	sympk	91	68.568	ENSCGRG00001010086	Sympk	92	68.568	Cricetulus_griseus_chok1gshd
ENSSDUG00000007092	sympk	98	88.870	ENSCSEG00000016802	sympk	99	88.029	Cynoglossus_semilaevis
ENSSDUG00000007092	sympk	97	78.501	ENSDARG00000059553	sympk	99	77.563	Danio_rerio
ENSSDUG00000007092	sympk	91	74.101	ENSDNOG00000016149	SYMPK	91	70.475	Dasypus_novemcinctus
ENSSDUG00000007092	sympk	86	37.593	FBgn0037371	Sym	91	37.558	Drosophila_melanogaster
ENSSDUG00000007092	sympk	69	59.907	ENSEBUG00000000387	sympk	88	59.907	Eptatretus_burgeri
ENSSDUG00000007092	sympk	91	74.371	ENSEASG00005014227	SYMPK	87	74.260	Equus_asinus_asinus
ENSSDUG00000007092	sympk	91	74.371	ENSECAG00000008163	SYMPK	87	74.260	Equus_caballus
ENSSDUG00000007092	sympk	71	75.000	ENSEEUG00000000270	-	79	75.000	Erinaceus_europaeus
ENSSDUG00000007092	sympk	99	80.527	ENSELUG00000000850	sympk	99	81.105	Esox_lucius
ENSSDUG00000007092	sympk	93	73.286	ENSFCAG00000007337	SYMPK	87	74.439	Felis_catus
ENSSDUG00000007092	sympk	91	74.011	ENSFDAG00000011272	SYMPK	92	70.559	Fukomys_damarensis
ENSSDUG00000007092	sympk	100	86.661	ENSFHEG00000010274	sympk	100	86.683	Fundulus_heteroclitus
ENSSDUG00000007092	sympk	89	84.715	ENSGMOG00000002357	sympk	99	84.715	Gadus_morhua
ENSSDUG00000007092	sympk	100	83.428	ENSGAFG00000010976	sympk	100	84.641	Gambusia_affinis
ENSSDUG00000007092	sympk	99	87.377	ENSGACG00000002735	sympk	99	90.098	Gasterosteus_aculeatus
ENSSDUG00000007092	sympk	65	67.327	ENSGAGG00000012538	-	88	73.788	Gopherus_agassizii
ENSSDUG00000007092	sympk	91	74.640	ENSGGOG00000003410	SYMPK	96	74.882	Gorilla_gorilla
ENSSDUG00000007092	sympk	100	90.000	ENSHBUG00000023564	sympk	100	90.000	Haplochromis_burtoni
ENSSDUG00000007092	sympk	91	70.324	ENSHGLG00000005228	SYMPK	87	70.224	Heterocephalus_glaber_female
ENSSDUG00000007092	sympk	93	73.013	ENSHGLG00100018571	SYMPK	91	73.013	Heterocephalus_glaber_male
ENSSDUG00000007092	sympk	89	85.570	ENSHCOG00000017400	sympk	97	80.989	Hippocampus_comes
ENSSDUG00000007092	sympk	89	84.206	ENSIPUG00000024020	SYMPK	98	77.823	Ictalurus_punctatus
ENSSDUG00000007092	sympk	92	74.107	ENSSTOG00000001534	SYMPK	92	70.976	Ictidomys_tridecemlineatus
ENSSDUG00000007092	sympk	98	70.701	ENSJJAG00000006633	Sympk	92	70.730	Jaculus_jaculus
ENSSDUG00000007092	sympk	100	87.234	ENSKMAG00000016292	sympk	99	87.398	Kryptolebias_marmoratus
ENSSDUG00000007092	sympk	100	91.095	ENSLBEG00000027913	sympk	100	91.258	Labrus_bergylta
ENSSDUG00000007092	sympk	89	69.793	ENSLACG00000016497	SYMPK	91	70.784	Latimeria_chalumnae
ENSSDUG00000007092	sympk	91	74.460	ENSLAFG00000008726	SYMPK	92	70.976	Loxodonta_africana
ENSSDUG00000007092	sympk	91	74.730	ENSMMUG00000015428	SYMPK	93	73.663	Macaca_mulatta
ENSSDUG00000007092	sympk	98	71.250	ENSMNEG00000019439	SYMPK	98	75.331	Macaca_nemestrina
ENSSDUG00000007092	sympk	91	74.619	ENSMLEG00000040508	SYMPK	98	75.236	Mandrillus_leucophaeus
ENSSDUG00000007092	sympk	100	92.320	ENSMAMG00000010486	sympk	100	92.320	Mastacembelus_armatus
ENSSDUG00000007092	sympk	100	90.000	ENSMZEG00005014146	sympk	100	90.000	Maylandia_zebra
ENSSDUG00000007092	sympk	89	74.331	ENSMAUG00000015657	Sympk	84	74.331	Mesocricetus_auratus
ENSSDUG00000007092	sympk	91	74.550	ENSMICG00000001871	SYMPK	90	73.690	Microcebus_murinus
ENSSDUG00000007092	sympk	91	74.101	ENSMOCG00000008388	Sympk	93	70.583	Microtus_ochrogaster
ENSSDUG00000007092	sympk	100	85.188	ENSMMOG00000019227	sympk	100	85.843	Mola_mola
ENSSDUG00000007092	sympk	89	75.594	ENSMODG00000021534	SYMPK	96	70.180	Monodelphis_domestica
ENSSDUG00000007092	sympk	77	88.819	ENSMALG00000008347	sympk	97	89.241	Monopterus_albus
ENSSDUG00000007092	sympk	91	74.101	MGP_CAROLIEiJ_G0029267	Sympk	93	70.432	Mus_caroli
ENSSDUG00000007092	sympk	91	74.011	ENSMUSG00000023118	Sympk	93	70.165	Mus_musculus
ENSSDUG00000007092	sympk	91	74.101	MGP_PahariEiJ_G0021127	Sympk	93	70.539	Mus_pahari
ENSSDUG00000007092	sympk	91	74.101	MGP_SPRETEiJ_G0030351	-	93	70.608	Mus_spretus
ENSSDUG00000007092	sympk	91	73.471	ENSMPUG00000005505	SYMPK	87	73.363	Mustela_putorius_furo
ENSSDUG00000007092	sympk	73	71.650	ENSMLUG00000001359	SYMPK	90	71.523	Myotis_lucifugus
ENSSDUG00000007092	sympk	98	70.534	ENSNGAG00000000820	Sympk	93	70.534	Nannospalax_galili
ENSSDUG00000007092	sympk	92	91.623	ENSNBRG00000018101	sympk	97	91.623	Neolamprologus_brichardi
ENSSDUG00000007092	sympk	91	59.474	ENSNLEG00000002369	SYMPK	92	61.755	Nomascus_leucogenys
ENSSDUG00000007092	sympk	76	66.038	ENSMEUG00000003866	SYMPK	77	66.038	Notamacropus_eugenii
ENSSDUG00000007092	sympk	92	71.706	ENSOPRG00000009967	SYMPK	92	69.026	Ochotona_princeps
ENSSDUG00000007092	sympk	98	71.048	ENSODEG00000007519	SYMPK	98	67.906	Octodon_degus
ENSSDUG00000007092	sympk	93	91.259	ENSONIG00000016802	sympk	99	91.154	Oreochromis_niloticus
ENSSDUG00000007092	sympk	78	73.613	ENSOCUG00000005511	SYMPK	89	73.613	Oryctolagus_cuniculus
ENSSDUG00000007092	sympk	100	87.398	ENSORLG00000015338	sympk	97	90.900	Oryzias_latipes
ENSSDUG00000007092	sympk	100	87.561	ENSORLG00020004402	sympk	100	87.561	Oryzias_latipes_hni
ENSSDUG00000007092	sympk	100	87.480	ENSORLG00015005712	sympk	100	87.480	Oryzias_latipes_hsok
ENSSDUG00000007092	sympk	100	87.807	ENSOMEG00000022561	sympk	100	87.807	Oryzias_melastigma
ENSSDUG00000007092	sympk	91	74.640	ENSOGAG00000013483	SYMPK	92	70.892	Otolemur_garnettii
ENSSDUG00000007092	sympk	89	72.095	ENSOARG00000010349	SYMPK	85	72.095	Ovis_aries
ENSSDUG00000007092	sympk	91	74.619	ENSPPAG00000043204	SYMPK	94	73.525	Pan_paniscus
ENSSDUG00000007092	sympk	91	74.550	ENSPPRG00000004282	SYMPK	87	74.439	Panthera_pardus
ENSSDUG00000007092	sympk	90	74.774	ENSPTIG00000015420	SYMPK	92	74.729	Panthera_tigris_altaica
ENSSDUG00000007092	sympk	91	74.619	ENSPTRG00000011169	SYMPK	94	73.525	Pan_troglodytes
ENSSDUG00000007092	sympk	91	74.730	ENSPANG00000019930	SYMPK	98	75.236	Papio_anubis
ENSSDUG00000007092	sympk	90	85.392	ENSPKIG00000017132	sympk	98	80.424	Paramormyrops_kingsleyae
ENSSDUG00000007092	sympk	91	74.101	ENSPEMG00000007564	Sympk	93	70.505	Peromyscus_maniculatus_bairdii
ENSSDUG00000007092	sympk	84	64.785	ENSPMAG00000004936	sympk	100	64.880	Petromyzon_marinus
ENSSDUG00000007092	sympk	90	75.227	ENSPCIG00000024476	SYMPK	98	73.684	Phascolarctos_cinereus
ENSSDUG00000007092	sympk	91	89.138	ENSPFOG00000001194	sympk	100	84.421	Poecilia_formosa
ENSSDUG00000007092	sympk	91	89.138	ENSPLAG00000012995	sympk	100	84.421	Poecilia_latipinna
ENSSDUG00000007092	sympk	91	89.138	ENSPMEG00000008099	sympk	100	84.421	Poecilia_mexicana
ENSSDUG00000007092	sympk	91	88.600	ENSPREG00000006176	sympk	100	83.876	Poecilia_reticulata
ENSSDUG00000007092	sympk	90	74.977	ENSPPYG00000010135	SYMPK	98	74.977	Pongo_abelii
ENSSDUG00000007092	sympk	84	76.522	ENSPCAG00000005182	SYMPK	80	76.242	Procavia_capensis
ENSSDUG00000007092	sympk	91	74.439	ENSPCOG00000023740	SYMPK	98	75.024	Propithecus_coquereli
ENSSDUG00000007092	sympk	91	73.201	ENSPVAG00000001355	SYMPK	89	73.094	Pteropus_vampyrus
ENSSDUG00000007092	sympk	100	88.961	ENSPNYG00000011455	sympk	100	89.266	Pundamilia_nyererei
ENSSDUG00000007092	sympk	98	79.472	ENSPNAG00000016505	sympk	98	78.909	Pygocentrus_nattereri
ENSSDUG00000007092	sympk	92	73.571	ENSRNOG00000014353	Sympk	93	70.407	Rattus_norvegicus
ENSSDUG00000007092	sympk	91	74.730	ENSRBIG00000040963	SYMPK	97	75.454	Rhinopithecus_bieti
ENSSDUG00000007092	sympk	91	74.730	ENSRROG00000024834	SYMPK	95	75.147	Rhinopithecus_roxellana
ENSSDUG00000007092	sympk	91	74.550	ENSSBOG00000034497	SYMPK	95	73.525	Saimiri_boliviensis_boliviensis
ENSSDUG00000007092	sympk	90	73.913	ENSSHAG00000003139	SYMPK	95	73.913	Sarcophilus_harrisii
ENSSDUG00000007092	sympk	99	79.918	ENSSFOG00015006974	sympk	98	79.918	Scleropages_formosus
ENSSDUG00000007092	sympk	100	91.456	ENSSMAG00000018130	sympk	81	92.352	Scophthalmus_maximus
ENSSDUG00000007092	sympk	100	99.836	ENSSLDG00000014774	sympk	100	99.836	Seriola_lalandi_dorsalis
ENSSDUG00000007092	sympk	58	84.615	ENSSARG00000004274	-	59	84.615	Sorex_araneus
ENSSDUG00000007092	sympk	90	75.428	ENSSPUG00000002789	SYMPK	96	69.641	Sphenodon_punctatus
ENSSDUG00000007092	sympk	100	92.571	ENSSPAG00000000854	sympk	100	92.735	Stegastes_partitus
ENSSDUG00000007092	sympk	90	74.324	ENSSSCG00000003093	SYMPK	87	74.170	Sus_scrofa
ENSSDUG00000007092	sympk	100	86.868	ENSTRUG00000010202	sympk	100	86.868	Takifugu_rubripes
ENSSDUG00000007092	sympk	89	90.976	ENSTNIG00000017855	sympk	100	84.795	Tetraodon_nigroviridis
ENSSDUG00000007092	sympk	80	88.235	ENSTBEG00000000454	SYMPK	76	88.235	Tupaia_belangeri
ENSSDUG00000007092	sympk	90	66.577	ENSTTRG00000014311	SYMPK	87	66.457	Tursiops_truncatus
ENSSDUG00000007092	sympk	91	72.197	ENSUAMG00000022272	SYMPK	94	72.388	Ursus_americanus
ENSSDUG00000007092	sympk	91	74.371	ENSUMAG00000023698	SYMPK	87	74.260	Ursus_maritimus
ENSSDUG00000007092	sympk	90	75.114	ENSVVUG00000003024	SYMPK	95	75.114	Vulpes_vulpes
ENSSDUG00000007092	sympk	91	68.711	ENSXETG00000024453	sympk	98	65.748	Xenopus_tropicalis
ENSSDUG00000007092	sympk	88	88.159	ENSXCOG00000015368	sympk	100	88.159	Xiphophorus_couchianus
ENSSDUG00000007092	sympk	91	88.869	ENSXMAG00000005737	sympk	100	84.245	Xiphophorus_maculatus