EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000007102 (Gene tree)
Gene ID: 111238953
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2516 bases
Position: chrBDQW01001815.1:427984-430499
Accession: 111238953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009660	PseudoU_synth_1	PF01416.20	6.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009848	-	1649	XM_022768690	ENSSDUP00000009660	421 (aa)	XP_022624411	UPI000BBE0FB3

Gene Model

Click here to download ENSSDUG00000007102's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007102's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007102	pus1	86	69.252	ENSG00000177192	PUS1	88	71.765	Homo_sapiens
ENSSDUG00000007102	pus1	100	84.086	ENSAPOG00000007254	pus1	100	84.086	Acanthochromis_polyacanthus
ENSSDUG00000007102	pus1	89	65.775	ENSAMEG00000013715	PUS1	89	65.775	Ailuropoda_melanoleuca
ENSSDUG00000007102	pus1	95	85.965	ENSACIG00000009169	pus1	96	85.965	Amphilophus_citrinellus
ENSSDUG00000007102	pus1	100	83.135	ENSAOCG00000022207	pus1	100	83.135	Amphiprion_ocellaris
ENSSDUG00000007102	pus1	100	82.898	ENSAPEG00000006039	pus1	99	86.701	Amphiprion_percula
ENSSDUG00000007102	pus1	93	87.468	ENSATEG00000020688	pus1	100	87.468	Anabas_testudineus
ENSSDUG00000007102	pus1	84	69.916	ENSACAG00000007367	PUS1	96	69.916	Anolis_carolinensis
ENSSDUG00000007102	pus1	77	68.210	ENSANAG00000036192	PUS1	99	68.210	Aotus_nancymaae
ENSSDUG00000007102	pus1	100	85.273	ENSACLG00000020868	pus1	100	88.235	Astatotilapia_calliptera
ENSSDUG00000007102	pus1	99	68.150	ENSAMXG00000008710	pus1	97	68.150	Astyanax_mexicanus
ENSSDUG00000007102	pus1	89	66.578	ENSBTAG00000012990	PUS1	91	66.578	Bos_taurus
ENSSDUG00000007102	pus1	85	38.710	WBGene00004248	pus-1	87	37.838	Caenorhabditis_elegans
ENSSDUG00000007102	pus1	60	69.291	ENSCJAG00000003720	PUS1	72	67.669	Callithrix_jacchus
ENSSDUG00000007102	pus1	89	66.223	ENSCAFG00000006429	PUS1	88	69.014	Canis_familiaris
ENSSDUG00000007102	pus1	84	69.014	ENSCAFG00020010737	PUS1	81	69.014	Canis_lupus_dingo
ENSSDUG00000007102	pus1	93	64.232	ENSCHIG00000000487	PUS1	91	66.845	Capra_hircus
ENSSDUG00000007102	pus1	87	67.760	ENSTSYG00000032605	PUS1	98	68.579	Carlito_syrichta
ENSSDUG00000007102	pus1	71	72.575	ENSCAPG00000006421	PUS1	94	72.607	Cavia_aperea
ENSSDUG00000007102	pus1	86	67.218	ENSCPOG00000001027	PUS1	99	61.176	Cavia_porcellus
ENSSDUG00000007102	pus1	80	70.536	ENSCCAG00000015879	PUS1	90	68.405	Cebus_capucinus
ENSSDUG00000007102	pus1	86	68.421	ENSCATG00000032870	PUS1	89	69.018	Cercocebus_atys
ENSSDUG00000007102	pus1	99	61.667	ENSCLAG00000011689	PUS1	99	61.667	Chinchilla_lanigera
ENSSDUG00000007102	pus1	86	68.698	ENSCSAG00000001879	PUS1	84	68.698	Chlorocebus_sabaeus
ENSSDUG00000007102	pus1	75	71.656	ENSCPBG00000024715	PUS1	93	69.419	Chrysemys_picta_bellii
ENSSDUG00000007102	pus1	81	43.732	ENSCING00000009426	-	91	43.732	Ciona_intestinalis
ENSSDUG00000007102	pus1	90	39.895	ENSCSAVG00000003751	-	73	40.730	Ciona_savignyi
ENSSDUG00000007102	pus1	86	60.942	ENSCANG00000035561	PUS1	89	62.614	Colobus_angolensis_palliatus
ENSSDUG00000007102	pus1	87	68.022	ENSCGRG00001019592	Pus1	86	68.022	Cricetulus_griseus_chok1gshd
ENSSDUG00000007102	pus1	87	68.022	ENSCGRG00000004048	Pus1	92	68.022	Cricetulus_griseus_crigri
ENSSDUG00000007102	pus1	100	76.722	ENSCSEG00000003629	pus1	100	76.722	Cynoglossus_semilaevis
ENSSDUG00000007102	pus1	100	81.948	ENSCVAG00000001265	pus1	100	81.948	Cyprinodon_variegatus
ENSSDUG00000007102	pus1	94	69.114	ENSDARG00000045562	pus1	97	76.838	Danio_rerio
ENSSDUG00000007102	pus1	95	62.222	ENSDNOG00000045576	PUS1	98	69.782	Dasypus_novemcinctus
ENSSDUG00000007102	pus1	77	69.444	ENSDORG00000011455	Pus1	99	69.444	Dipodomys_ordii
ENSSDUG00000007102	pus1	80	45.402	FBgn0038811	PUS1	83	45.402	Drosophila_melanogaster
ENSSDUG00000007102	pus1	87	66.667	ENSETEG00000019160	PUS1	89	67.024	Echinops_telfairi
ENSSDUG00000007102	pus1	79	43.820	ENSEBUG00000000368	-	67	42.308	Eptatretus_burgeri
ENSSDUG00000007102	pus1	82	70.231	ENSEASG00005016535	PUS1	80	70.231	Equus_asinus_asinus
ENSSDUG00000007102	pus1	82	70.231	ENSECAG00000006965	PUS1	87	70.231	Equus_caballus
ENSSDUG00000007102	pus1	93	76.215	ENSELUG00000010424	pus1	99	76.215	Esox_lucius
ENSSDUG00000007102	pus1	86	68.044	ENSFCAG00000010780	PUS1	84	68.044	Felis_catus
ENSSDUG00000007102	pus1	91	66.329	ENSFALG00000008273	PUS1	92	66.582	Ficedula_albicollis
ENSSDUG00000007102	pus1	86	68.421	ENSFDAG00000012518	PUS1	87	68.421	Fukomys_damarensis
ENSSDUG00000007102	pus1	100	81.925	ENSFHEG00000010504	pus1	100	81.925	Fundulus_heteroclitus
ENSSDUG00000007102	pus1	93	74.555	ENSGMOG00000008143	pus1	99	74.555	Gadus_morhua
ENSSDUG00000007102	pus1	90	66.842	ENSGALG00000002354	PUS1	93	66.842	Gallus_gallus
ENSSDUG00000007102	pus1	100	83.373	ENSGAFG00000006578	pus1	100	83.373	Gambusia_affinis
ENSSDUG00000007102	pus1	100	81.087	ENSGACG00000017566	pus1	99	84.478	Gasterosteus_aculeatus
ENSSDUG00000007102	pus1	78	68.997	ENSGAGG00000016730	-	94	68.997	Gopherus_agassizii
ENSSDUG00000007102	pus1	86	69.444	ENSGGOG00000009178	PUS1	87	70.245	Gorilla_gorilla
ENSSDUG00000007102	pus1	100	85.511	ENSHBUG00000001316	pus1	100	88.491	Haplochromis_burtoni
ENSSDUG00000007102	pus1	68	30.063	ENSHGLG00000015753	-	81	30.063	Heterocephalus_glaber_female
ENSSDUG00000007102	pus1	86	66.389	ENSHGLG00000016086	PUS1	91	66.389	Heterocephalus_glaber_female
ENSSDUG00000007102	pus1	86	66.111	ENSHGLG00100019362	PUS1	91	66.111	Heterocephalus_glaber_male
ENSSDUG00000007102	pus1	100	75.297	ENSHCOG00000014288	pus1	96	75.297	Hippocampus_comes
ENSSDUG00000007102	pus1	95	71.605	ENSIPUG00000010387	pus1	91	76.294	Ictalurus_punctatus
ENSSDUG00000007102	pus1	78	72.372	ENSSTOG00000011245	PUS1	83	69.209	Ictidomys_tridecemlineatus
ENSSDUG00000007102	pus1	87	66.940	ENSJJAG00000000088	Pus1	86	66.940	Jaculus_jaculus
ENSSDUG00000007102	pus1	96	78.133	ENSKMAG00000012702	pus1	96	78.133	Kryptolebias_marmoratus
ENSSDUG00000007102	pus1	95	82.793	ENSLBEG00000002845	pus1	98	82.793	Labrus_bergylta
ENSSDUG00000007102	pus1	76	57.453	ENSLACG00000016044	-	97	57.453	Latimeria_chalumnae
ENSSDUG00000007102	pus1	86	66.298	ENSLACG00000018598	PUS1	94	64.380	Latimeria_chalumnae
ENSSDUG00000007102	pus1	90	68.947	ENSLOCG00000006127	pus1	96	68.947	Lepisosteus_oculatus
ENSSDUG00000007102	pus1	83	68.927	ENSLAFG00000028731	PUS1	94	68.272	Loxodonta_africana
ENSSDUG00000007102	pus1	86	68.698	ENSMFAG00000041194	PUS1	89	69.325	Macaca_fascicularis
ENSSDUG00000007102	pus1	81	71.471	ENSMMUG00000031463	PUS1	87	72.459	Macaca_mulatta
ENSSDUG00000007102	pus1	86	68.698	ENSMNEG00000002814	PUS1	89	69.325	Macaca_nemestrina
ENSSDUG00000007102	pus1	77	69.444	ENSMLEG00000043560	PUS1	99	69.444	Mandrillus_leucophaeus
ENSSDUG00000007102	pus1	100	82.660	ENSMAMG00000007371	pus1	100	82.660	Mastacembelus_armatus
ENSSDUG00000007102	pus1	100	85.273	ENSMZEG00005017746	pus1	100	85.273	Maylandia_zebra
ENSSDUG00000007102	pus1	77	71.517	ENSMGAG00000001958	PUS1	98	71.517	Meleagris_gallopavo
ENSSDUG00000007102	pus1	86	69.722	ENSMAUG00000001482	Pus1	84	69.722	Mesocricetus_auratus
ENSSDUG00000007102	pus1	89	66.755	ENSMICG00000030980	PUS1	91	66.755	Microcebus_murinus
ENSSDUG00000007102	pus1	83	69.714	ENSMOCG00000022311	Pus1	83	69.492	Microtus_ochrogaster
ENSSDUG00000007102	pus1	93	79.540	ENSMMOG00000021022	pus1	99	79.540	Mola_mola
ENSSDUG00000007102	pus1	81	67.638	ENSMODG00000015551	PUS1	80	66.017	Monodelphis_domestica
ENSSDUG00000007102	pus1	99	81.905	ENSMALG00000013202	pus1	99	81.905	Monopterus_albus
ENSSDUG00000007102	pus1	89	67.560	MGP_CAROLIEiJ_G0027551	Pus1	92	68.579	Mus_caroli
ENSSDUG00000007102	pus1	89	67.560	ENSMUSG00000029507	Pus1	92	68.579	Mus_musculus
ENSSDUG00000007102	pus1	87	68.579	MGP_PahariEiJ_G0024133	Pus1	92	68.579	Mus_pahari
ENSSDUG00000007102	pus1	89	67.560	MGP_SPRETEiJ_G0028549	Pus1	92	68.579	Mus_spretus
ENSSDUG00000007102	pus1	81	71.053	ENSMPUG00000002314	PUS1	86	71.053	Mustela_putorius_furo
ENSSDUG00000007102	pus1	86	67.127	ENSMLUG00000015790	PUS1	99	67.127	Myotis_lucifugus
ENSSDUG00000007102	pus1	81	72.271	ENSNGAG00000012976	Pus1	80	72.271	Nannospalax_galili
ENSSDUG00000007102	pus1	93	87.980	ENSNBRG00000020502	pus1	99	89.305	Neolamprologus_brichardi
ENSSDUG00000007102	pus1	86	67.313	ENSNLEG00000008505	PUS1	99	69.841	Nomascus_leucogenys
ENSSDUG00000007102	pus1	81	61.988	ENSMEUG00000002825	PUS1	92	61.988	Notamacropus_eugenii
ENSSDUG00000007102	pus1	78	62.997	ENSOPRG00000002701	-	86	62.997	Ochotona_princeps
ENSSDUG00000007102	pus1	89	66.578	ENSODEG00000008248	PUS1	96	67.671	Octodon_degus
ENSSDUG00000007102	pus1	93	87.154	ENSONIG00000003803	pus1	100	87.154	Oreochromis_niloticus
ENSSDUG00000007102	pus1	94	63.930	ENSOANG00000010619	PUS1	92	64.428	Ornithorhynchus_anatinus
ENSSDUG00000007102	pus1	86	66.129	ENSOCUG00000007310	PUS1	81	65.957	Oryctolagus_cuniculus
ENSSDUG00000007102	pus1	100	80.332	ENSORLG00000010787	pus1	100	80.332	Oryzias_latipes
ENSSDUG00000007102	pus1	100	79.858	ENSORLG00020011483	pus1	100	79.858	Oryzias_latipes_hni
ENSSDUG00000007102	pus1	100	80.095	ENSORLG00015023012	pus1	99	83.333	Oryzias_latipes_hsok
ENSSDUG00000007102	pus1	98	79.319	ENSOMEG00000022655	pus1	96	79.319	Oryzias_melastigma
ENSSDUG00000007102	pus1	85	68.347	ENSOGAG00000008720	PUS1	92	69.188	Otolemur_garnettii
ENSSDUG00000007102	pus1	89	66.578	ENSOARG00000013316	PUS1	84	66.578	Ovis_aries
ENSSDUG00000007102	pus1	86	69.529	ENSPPAG00000040971	PUS1	87	70.245	Pan_paniscus
ENSSDUG00000007102	pus1	84	69.014	ENSPPRG00000015456	PUS1	88	69.014	Panthera_pardus
ENSSDUG00000007102	pus1	84	68.750	ENSPTIG00000004201	PUS1	90	69.014	Panthera_tigris_altaica
ENSSDUG00000007102	pus1	86	69.529	ENSPTRG00000005643	PUS1	87	70.245	Pan_troglodytes
ENSSDUG00000007102	pus1	86	68.698	ENSPANG00000000376	PUS1	89	69.325	Papio_anubis
ENSSDUG00000007102	pus1	87	68.937	ENSPKIG00000019369	pus1	87	66.927	Paramormyrops_kingsleyae
ENSSDUG00000007102	pus1	60	30.314	ENSPSIG00000013961	PUS3	52	30.314	Pelodiscus_sinensis
ENSSDUG00000007102	pus1	89	66.578	ENSPSIG00000016432	PUS1	88	66.316	Pelodiscus_sinensis
ENSSDUG00000007102	pus1	88	79.032	ENSPMGG00000004522	pus1	96	79.032	Periophthalmus_magnuspinnatus
ENSSDUG00000007102	pus1	87	68.306	ENSPEMG00000013448	Pus1	86	68.306	Peromyscus_maniculatus_bairdii
ENSSDUG00000007102	pus1	78	59.940	ENSPMAG00000004636	pus1	99	59.940	Petromyzon_marinus
ENSSDUG00000007102	pus1	71	59.468	ENSPCIG00000022609	-	77	57.585	Phascolarctos_cinereus
ENSSDUG00000007102	pus1	100	81.710	ENSPFOG00000019669	pus1	100	81.710	Poecilia_formosa
ENSSDUG00000007102	pus1	100	81.473	ENSPLAG00000002692	-	100	81.473	Poecilia_latipinna
ENSSDUG00000007102	pus1	100	81.473	ENSPLAG00000007185	pus1	100	81.473	Poecilia_latipinna
ENSSDUG00000007102	pus1	100	81.948	ENSPMEG00000011115	PUS1	100	81.948	Poecilia_mexicana
ENSSDUG00000007102	pus1	98	82.238	ENSPMEG00000006038	pus1	98	84.596	Poecilia_mexicana
ENSSDUG00000007102	pus1	94	84.810	ENSPREG00000007231	pus1	99	86.908	Poecilia_reticulata
ENSSDUG00000007102	pus1	94	63.910	ENSPPYG00000005132	PUS1	93	63.910	Pongo_abelii
ENSSDUG00000007102	pus1	62	66.540	ENSPCAG00000009110	-	64	66.540	Procavia_capensis
ENSSDUG00000007102	pus1	76	66.458	ENSPCOG00000015595	PUS1	91	59.574	Propithecus_coquereli
ENSSDUG00000007102	pus1	100	85.036	ENSPNYG00000013571	pus1	100	85.036	Pundamilia_nyererei
ENSSDUG00000007102	pus1	100	68.706	ENSPNAG00000003938	pus1	98	68.706	Pygocentrus_nattereri
ENSSDUG00000007102	pus1	87	68.033	ENSRNOG00000037500	Pus1	86	67.024	Rattus_norvegicus
ENSSDUG00000007102	pus1	86	69.252	ENSRBIG00000043177	PUS1	90	69.939	Rhinopithecus_bieti
ENSSDUG00000007102	pus1	86	69.252	ENSRROG00000039744	PUS1	88	69.536	Rhinopithecus_roxellana
ENSSDUG00000007102	pus1	81	41.447	YPL212C	-	65	40.244	Saccharomyces_cerevisiae
ENSSDUG00000007102	pus1	86	68.698	ENSSBOG00000023593	PUS1	92	69.040	Saimiri_boliviensis_boliviensis
ENSSDUG00000007102	pus1	85	67.778	ENSSHAG00000013193	PUS1	85	69.054	Sarcophilus_harrisii
ENSSDUG00000007102	pus1	87	70.000	ENSSFOG00015003463	pus1	87	69.110	Scleropages_formosus
ENSSDUG00000007102	pus1	100	83.610	ENSSMAG00000019075	pus1	100	83.610	Scophthalmus_maximus
ENSSDUG00000007102	pus1	100	99.525	ENSSLDG00000022850	pus1	100	99.525	Seriola_lalandi_dorsalis
ENSSDUG00000007102	pus1	72	62.376	ENSSARG00000008367	PUS1	98	62.376	Sorex_araneus
ENSSDUG00000007102	pus1	89	66.755	ENSSPUG00000010009	PUS1	95	66.755	Sphenodon_punctatus
ENSSDUG00000007102	pus1	93	87.724	ENSSPAG00000006272	pus1	99	87.724	Stegastes_partitus
ENSSDUG00000007102	pus1	89	67.021	ENSSSCG00000009741	PUS1	91	68.852	Sus_scrofa
ENSSDUG00000007102	pus1	78	74.242	ENSTGUG00000008068	PUS1	100	74.622	Taeniopygia_guttata
ENSSDUG00000007102	pus1	89	78.723	ENSTRUG00000002198	pus1	92	80.609	Takifugu_rubripes
ENSSDUG00000007102	pus1	93	74.046	ENSTNIG00000003942	pus1	98	74.809	Tetraodon_nigroviridis
ENSSDUG00000007102	pus1	92	65.296	ENSTTRG00000000632	PUS1	91	65.296	Tursiops_truncatus
ENSSDUG00000007102	pus1	81	70.468	ENSUAMG00000017197	PUS1	86	70.468	Ursus_americanus
ENSSDUG00000007102	pus1	93	64.615	ENSUMAG00000002831	PUS1	94	72.930	Ursus_maritimus
ENSSDUG00000007102	pus1	84	69.296	ENSVVUG00000004199	PUS1	80	69.296	Vulpes_vulpes
ENSSDUG00000007102	pus1	76	48.607	ENSXETG00000033640	-	99	48.607	Xenopus_tropicalis
ENSSDUG00000007102	pus1	88	65.583	ENSXETG00000002030	pus1	91	65.583	Xenopus_tropicalis
ENSSDUG00000007102	pus1	94	86.869	ENSXCOG00000004722	pus1	98	88.158	Xiphophorus_couchianus
ENSSDUG00000007102	pus1	100	83.373	ENSXMAG00000000988	pus1	100	83.373	Xiphophorus_maculatus