EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000007180 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 6196 bases
Position: chrBDQW01000258.1:740751-746946
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009796	HGTP_anticodon	PF03129.20	3.5e-19	1	1
ENSSDUP00000009796	tRNA-synt_2b	PF00587.25	2.9e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009986	-	1302	-	ENSSDUP00000009796	433 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000007180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007180's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000007180	-	99	65.187	ENSSDUG00000007476	tarsl2	53	65.187
ENSSDUG00000007180	-	99	66.589	ENSSDUG00000014184	tars	59	66.589

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007180	-	99	65.421	ENSG00000185418	TARSL2	53	65.421	Homo_sapiens
ENSSDUG00000007180	-	98	79.529	ENSAPOG00000015706	-	100	79.529	Acanthochromis_polyacanthus
ENSSDUG00000007180	-	98	64.789	ENSAMEG00000003074	TARSL2	54	64.789	Ailuropoda_melanoleuca
ENSSDUG00000007180	-	99	90.487	ENSACIG00000007759	-	93	90.487	Amphilophus_citrinellus
ENSSDUG00000007180	-	99	85.082	ENSAOCG00000012359	-	100	85.082	Amphiprion_ocellaris
ENSSDUG00000007180	-	98	81.647	ENSAPEG00000007512	-	100	81.647	Amphiprion_percula
ENSSDUG00000007180	-	99	92.361	ENSATEG00000023568	-	62	92.361	Anabas_testudineus
ENSSDUG00000007180	-	97	66.351	ENSAPLG00000008485	TARSL2	59	66.351	Anas_platyrhynchos
ENSSDUG00000007180	-	99	63.785	ENSACAG00000003076	-	63	63.785	Anolis_carolinensis
ENSSDUG00000007180	-	97	48.210	ENSACAG00000000199	TARSL2	52	48.210	Anolis_carolinensis
ENSSDUG00000007180	-	99	59.813	ENSANAG00000020687	TARSL2	51	62.694	Aotus_nancymaae
ENSSDUG00000007180	-	99	90.741	ENSACLG00000020262	-	62	90.741	Astatotilapia_calliptera
ENSSDUG00000007180	-	99	82.009	ENSAMXG00000012533	-	62	82.009	Astyanax_mexicanus
ENSSDUG00000007180	-	99	62.383	ENSBTAG00000007651	TARSL2	53	62.383	Bos_taurus
ENSSDUG00000007180	-	99	64.629	ENSCJAG00000017350	TARSL2	51	67.617	Callithrix_jacchus
ENSSDUG00000007180	-	98	64.637	ENSCAFG00000010453	TARSL2	53	64.637	Canis_familiaris
ENSSDUG00000007180	-	98	64.403	ENSCAFG00020020868	TARSL2	69	64.403	Canis_lupus_dingo
ENSSDUG00000007180	-	99	63.084	ENSTSYG00000004538	TARSL2	61	63.084	Carlito_syrichta
ENSSDUG00000007180	-	99	56.542	ENSCAPG00000004815	TARSL2	63	56.542	Cavia_aperea
ENSSDUG00000007180	-	99	64.486	ENSCPOG00000008850	TARSL2	61	64.486	Cavia_porcellus
ENSSDUG00000007180	-	99	64.720	ENSCCAG00000030068	TARSL2	50	68.135	Cebus_capucinus
ENSSDUG00000007180	-	99	64.720	ENSCATG00000037383	TARSL2	55	64.720	Cercocebus_atys
ENSSDUG00000007180	-	99	64.720	ENSCLAG00000016873	TARSL2	56	64.720	Chinchilla_lanigera
ENSSDUG00000007180	-	99	64.720	ENSCSAG00000016828	TARSL2	53	64.720	Chlorocebus_sabaeus
ENSSDUG00000007180	-	89	67.358	ENSCHOG00000001319	TARSL2	59	67.358	Choloepus_hoffmanni
ENSSDUG00000007180	-	98	65.802	ENSCPBG00000010792	TARSL2	53	65.802	Chrysemys_picta_bellii
ENSSDUG00000007180	-	99	64.953	ENSCANG00000035438	TARSL2	60	64.953	Colobus_angolensis_palliatus
ENSSDUG00000007180	-	99	64.720	ENSCGRG00001020827	Tarsl2	54	64.720	Cricetulus_griseus_chok1gshd
ENSSDUG00000007180	-	99	64.720	ENSCGRG00000011398	Tarsl2	60	64.720	Cricetulus_griseus_crigri
ENSSDUG00000007180	-	99	90.421	ENSCSEG00000002562	-	100	88.056	Cynoglossus_semilaevis
ENSSDUG00000007180	-	99	89.486	ENSCVAG00000009253	-	99	89.486	Cyprinodon_variegatus
ENSSDUG00000007180	-	98	79.196	ENSDARG00000075385	LO017852.1	99	79.196	Danio_rerio
ENSSDUG00000007180	-	99	61.449	ENSDNOG00000046161	TARSL2	61	61.449	Dasypus_novemcinctus
ENSSDUG00000007180	-	98	64.871	ENSDORG00000009653	Tarsl2	61	64.871	Dipodomys_ordii
ENSSDUG00000007180	-	99	64.252	ENSEASG00005017718	TARSL2	54	64.252	Equus_asinus_asinus
ENSSDUG00000007180	-	99	64.252	ENSECAG00000024315	TARSL2	54	64.252	Equus_caballus
ENSSDUG00000007180	-	99	63.551	ENSEEUG00000014117	TARSL2	70	63.551	Erinaceus_europaeus
ENSSDUG00000007180	-	99	83.721	ENSELUG00000013552	-	62	83.721	Esox_lucius
ENSSDUG00000007180	-	99	64.486	ENSFCAG00000008836	TARSL2	51	67.617	Felis_catus
ENSSDUG00000007180	-	97	66.903	ENSFALG00000012444	TARSL2	57	66.903	Ficedula_albicollis
ENSSDUG00000007180	-	99	64.019	ENSFDAG00000002767	TARSL2	65	64.019	Fukomys_damarensis
ENSSDUG00000007180	-	99	88.889	ENSFHEG00000021877	-	79	88.889	Fundulus_heteroclitus
ENSSDUG00000007180	-	99	85.814	ENSGMOG00000006184	-	62	85.814	Gadus_morhua
ENSSDUG00000007180	-	97	66.430	ENSGALG00000003985	TARSL2	54	66.430	Gallus_gallus
ENSSDUG00000007180	-	99	63.934	ENSGALG00000043416	-	95	64.634	Gallus_gallus
ENSSDUG00000007180	-	99	89.535	ENSGAFG00000012691	-	62	89.535	Gambusia_affinis
ENSSDUG00000007180	-	99	92.130	ENSGACG00000011734	-	63	92.130	Gasterosteus_aculeatus
ENSSDUG00000007180	-	98	65.566	ENSGAGG00000010775	TARSL2	53	65.566	Gopherus_agassizii
ENSSDUG00000007180	-	99	65.187	ENSGGOG00000007839	TARSL2	55	65.187	Gorilla_gorilla
ENSSDUG00000007180	-	99	91.204	ENSHBUG00000003411	-	63	91.204	Haplochromis_burtoni
ENSSDUG00000007180	-	99	63.785	ENSHGLG00000011618	TARSL2	54	63.785	Heterocephalus_glaber_female
ENSSDUG00000007180	-	99	63.785	ENSHGLG00100016769	TARSL2	61	63.785	Heterocephalus_glaber_male
ENSSDUG00000007180	-	99	86.916	ENSHCOG00000014119	-	61	86.916	Hippocampus_comes
ENSSDUG00000007180	-	98	74.353	ENSIPUG00000000099	-	100	74.353	Ictalurus_punctatus
ENSSDUG00000007180	-	99	64.720	ENSSTOG00000032725	TARSL2	54	64.720	Ictidomys_tridecemlineatus
ENSSDUG00000007180	-	99	89.767	ENSKMAG00000001354	-	62	89.767	Kryptolebias_marmoratus
ENSSDUG00000007180	-	98	88.000	ENSLBEG00000026238	-	100	88.000	Labrus_bergylta
ENSSDUG00000007180	-	99	64.486	ENSLAFG00000011941	TARSL2	63	64.486	Loxodonta_africana
ENSSDUG00000007180	-	99	64.486	ENSMFAG00000001902	TARSL2	50	67.617	Macaca_fascicularis
ENSSDUG00000007180	-	99	64.720	ENSMMUG00000000278	TARSL2	50	67.876	Macaca_mulatta
ENSSDUG00000007180	-	99	64.486	ENSMNEG00000034952	TARSL2	50	67.617	Macaca_nemestrina
ENSSDUG00000007180	-	99	65.187	ENSMLEG00000035535	TARSL2	61	65.187	Mandrillus_leucophaeus
ENSSDUG00000007180	-	99	92.130	ENSMAMG00000015032	-	62	92.130	Mastacembelus_armatus
ENSSDUG00000007180	-	99	90.741	ENSMZEG00005015989	-	62	90.741	Maylandia_zebra
ENSSDUG00000007180	-	83	66.489	ENSMGAG00000004951	TARSL2	57	66.489	Meleagris_gallopavo
ENSSDUG00000007180	-	87	61.680	ENSMAUG00000015756	Tarsl2	54	61.680	Mesocricetus_auratus
ENSSDUG00000007180	-	99	64.486	ENSMICG00000013039	TARSL2	62	64.486	Microcebus_murinus
ENSSDUG00000007180	-	99	65.654	ENSMOCG00000014909	Tarsl2	54	65.654	Microtus_ochrogaster
ENSSDUG00000007180	-	99	87.963	ENSMMOG00000016135	-	98	87.963	Mola_mola
ENSSDUG00000007180	-	98	65.330	ENSMODG00000011941	TARSL2	53	65.330	Monodelphis_domestica
ENSSDUG00000007180	-	99	91.435	ENSMALG00000007340	-	61	91.435	Monopterus_albus
ENSSDUG00000007180	-	99	64.953	MGP_CAROLIEiJ_G0029834	Tarsl2	54	64.953	Mus_caroli
ENSSDUG00000007180	-	99	64.720	ENSMUSG00000030515	Tarsl2	54	64.720	Mus_musculus
ENSSDUG00000007180	-	99	64.720	MGP_PahariEiJ_G0013059	Tarsl2	54	64.720	Mus_pahari
ENSSDUG00000007180	-	98	65.566	ENSMPUG00000011032	TARSL2	54	65.566	Mustela_putorius_furo
ENSSDUG00000007180	-	74	68.125	ENSMLUG00000024482	-	53	68.125	Myotis_lucifugus
ENSSDUG00000007180	-	98	62.736	ENSMLUG00000012870	-	53	62.736	Myotis_lucifugus
ENSSDUG00000007180	-	98	65.094	ENSNGAG00000020451	Tarsl2	53	65.094	Nannospalax_galili
ENSSDUG00000007180	-	99	90.972	ENSNBRG00000003429	-	63	90.972	Neolamprologus_brichardi
ENSSDUG00000007180	-	99	64.516	ENSNLEG00000000541	TARSL2	55	64.516	Nomascus_leucogenys
ENSSDUG00000007180	-	98	58.726	ENSMEUG00000002935	TARSL2	53	58.726	Notamacropus_eugenii
ENSSDUG00000007180	-	97	42.317	ENSOPRG00000002689	-	52	42.317	Ochotona_princeps
ENSSDUG00000007180	-	99	64.486	ENSODEG00000014454	TARSL2	54	64.486	Octodon_degus
ENSSDUG00000007180	-	99	90.993	ENSONIG00000006402	-	65	90.993	Oreochromis_niloticus
ENSSDUG00000007180	-	97	65.166	ENSOANG00000013263	TARSL2	63	65.166	Ornithorhynchus_anatinus
ENSSDUG00000007180	-	99	63.785	ENSOCUG00000010740	TARSL2	60	63.785	Oryctolagus_cuniculus
ENSSDUG00000007180	-	99	87.907	ENSORLG00000010391	-	62	87.907	Oryzias_latipes
ENSSDUG00000007180	-	99	88.140	ENSORLG00020008928	-	63	88.140	Oryzias_latipes_hni
ENSSDUG00000007180	-	99	88.140	ENSORLG00015014897	-	63	88.140	Oryzias_latipes_hsok
ENSSDUG00000007180	-	99	89.120	ENSOMEG00000009022	-	63	89.120	Oryzias_melastigma
ENSSDUG00000007180	-	99	63.551	ENSOGAG00000014311	TARSL2	53	63.551	Otolemur_garnettii
ENSSDUG00000007180	-	99	62.617	ENSOARG00000016573	TARSL2	61	62.617	Ovis_aries
ENSSDUG00000007180	-	99	64.953	ENSPPAG00000040066	TARSL2	62	64.953	Pan_paniscus
ENSSDUG00000007180	-	99	64.252	ENSPPRG00000017275	TARSL2	51	67.358	Panthera_pardus
ENSSDUG00000007180	-	99	64.252	ENSPTIG00000015184	TARSL2	53	64.252	Panthera_tigris_altaica
ENSSDUG00000007180	-	99	65.187	ENSPTRG00000007516	TARSL2	53	65.187	Pan_troglodytes
ENSSDUG00000007180	-	99	61.503	ENSPANG00000022401	TARSL2	54	61.503	Papio_anubis
ENSSDUG00000007180	-	99	76.402	ENSPKIG00000010658	-	99	75.529	Paramormyrops_kingsleyae
ENSSDUG00000007180	-	98	65.094	ENSPSIG00000008419	TARSL2	73	65.094	Pelodiscus_sinensis
ENSSDUG00000007180	-	99	87.383	ENSPMGG00000007785	-	98	87.383	Periophthalmus_magnuspinnatus
ENSSDUG00000007180	-	99	65.187	ENSPEMG00000019852	Tarsl2	58	65.187	Peromyscus_maniculatus_bairdii
ENSSDUG00000007180	-	98	65.802	ENSPCIG00000022481	TARSL2	53	65.802	Phascolarctos_cinereus
ENSSDUG00000007180	-	99	88.684	ENSPFOG00000013444	-	65	88.684	Poecilia_formosa
ENSSDUG00000007180	-	99	89.070	ENSPLAG00000018145	-	62	89.070	Poecilia_latipinna
ENSSDUG00000007180	-	99	88.889	ENSPMEG00000023625	-	63	88.889	Poecilia_mexicana
ENSSDUG00000007180	-	98	88.235	ENSPREG00000017312	-	100	88.235	Poecilia_reticulata
ENSSDUG00000007180	-	99	65.187	ENSPPYG00000006830	TARSL2	60	65.187	Pongo_abelii
ENSSDUG00000007180	-	99	57.407	ENSPCAG00000011132	TARSL2	54	57.407	Procavia_capensis
ENSSDUG00000007180	-	99	48.832	ENSPCOG00000026095	TARSL2	51	48.832	Propithecus_coquereli
ENSSDUG00000007180	-	99	90.972	ENSPNYG00000004232	-	62	90.972	Pundamilia_nyererei
ENSSDUG00000007180	-	99	81.439	ENSPNAG00000002308	-	63	81.439	Pygocentrus_nattereri
ENSSDUG00000007180	-	99	64.953	ENSRBIG00000035707	TARSL2	55	64.953	Rhinopithecus_bieti
ENSSDUG00000007180	-	99	64.953	ENSRROG00000029492	TARSL2	60	64.953	Rhinopithecus_roxellana
ENSSDUG00000007180	-	99	64.019	ENSSBOG00000029807	TARSL2	62	64.019	Saimiri_boliviensis_boliviensis
ENSSDUG00000007180	-	98	66.038	ENSSHAG00000010266	TARSL2	56	66.038	Sarcophilus_harrisii
ENSSDUG00000007180	-	99	78.505	ENSSFOG00015022086	tars2	88	76.584	Scleropages_formosus
ENSSDUG00000007180	-	99	92.593	ENSSMAG00000015682	-	63	92.593	Scophthalmus_maximus
ENSSDUG00000007180	-	99	99.297	ENSSLDG00000015367	-	100	99.297	Seriola_lalandi_dorsalis
ENSSDUG00000007180	-	98	65.802	ENSSPUG00000001523	TARSL2	98	65.802	Sphenodon_punctatus
ENSSDUG00000007180	-	99	88.837	ENSSPAG00000018887	-	63	88.837	Stegastes_partitus
ENSSDUG00000007180	-	99	61.449	ENSSSCG00000005781	TARSL2	64	61.449	Sus_scrofa
ENSSDUG00000007180	-	97	66.194	ENSTGUG00000005726	TARSL2	63	66.194	Taeniopygia_guttata
ENSSDUG00000007180	-	97	59.811	ENSTGUG00000004602	-	98	59.811	Taeniopygia_guttata
ENSSDUG00000007180	-	99	91.101	ENSTRUG00000015004	-	100	91.101	Takifugu_rubripes
ENSSDUG00000007180	-	97	86.744	ENSTNIG00000008060	-	61	86.744	Tetraodon_nigroviridis
ENSSDUG00000007180	-	82	59.718	ENSTBEG00000001134	-	52	59.718	Tupaia_belangeri
ENSSDUG00000007180	-	99	62.383	ENSTTRG00000016207	TARSL2	61	62.383	Tursiops_truncatus
ENSSDUG00000007180	-	99	64.720	ENSUMAG00000024371	TARSL2	76	64.720	Ursus_maritimus
ENSSDUG00000007180	-	98	64.637	ENSVVUG00000014742	TARSL2	62	64.637	Vulpes_vulpes
ENSSDUG00000007180	-	99	89.302	ENSXCOG00000019508	-	99	88.498	Xiphophorus_couchianus
ENSSDUG00000007180	-	99	89.302	ENSXMAG00000016382	-	62	89.302	Xiphophorus_maculatus