EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000007202 (Gene tree)
Gene ID: 111237319
Gene Symbol: rpp40
Alias: Rpp40|rpp40l|zgc:86704
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3100 bases
Position: chrBDQW01000850.1:430447-433546
Accession: 111237319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009885	Ribonuc_P_40	PF08584.11	2.4e-81	1	1
ENSSDUP00000009898	Ribonuc_P_40	PF08584.11	6e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000010076	-	1065	XM_022766365	ENSSDUP00000009885	354 (aa)	XP_022622086	UPI000BBE7F28
ENSSDUT00000010088	-	1011	-	ENSSDUP00000009898	336 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000007202's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG
sdu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007202's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007202	rpp40	99	37.535	ENSG00000124787	RPP40	98	37.919	Homo_sapiens
ENSSDUG00000007202	rpp40	88	68.562	ENSAPOG00000008660	rpp40	92	68.562	Acanthochromis_polyacanthus
ENSSDUG00000007202	rpp40	99	38.655	ENSAMEG00000012938	RPP40	98	38.655	Ailuropoda_melanoleuca
ENSSDUG00000007202	rpp40	99	71.510	ENSACIG00000003617	rpp40	99	71.510	Amphilophus_citrinellus
ENSSDUG00000007202	rpp40	100	78.531	ENSAOCG00000011846	rpp40	100	78.531	Amphiprion_ocellaris
ENSSDUG00000007202	rpp40	100	78.531	ENSAPEG00000001322	rpp40	100	78.531	Amphiprion_percula
ENSSDUG00000007202	rpp40	100	80.618	ENSATEG00000006584	rpp40	100	80.899	Anabas_testudineus
ENSSDUG00000007202	rpp40	83	38.742	ENSAPLG00000005691	RPP40	99	38.742	Anas_platyrhynchos
ENSSDUG00000007202	rpp40	99	39.326	ENSACAG00000006550	RPP40	87	39.326	Anolis_carolinensis
ENSSDUG00000007202	rpp40	99	35.854	ENSANAG00000029246	RPP40	98	35.854	Aotus_nancymaae
ENSSDUG00000007202	rpp40	98	75.793	ENSACLG00000015883	rpp40	96	75.793	Astatotilapia_calliptera
ENSSDUG00000007202	rpp40	100	48.603	ENSAMXG00000001755	rpp40	100	48.603	Astyanax_mexicanus
ENSSDUG00000007202	rpp40	99	39.216	ENSBTAG00000003332	RPP40	98	39.216	Bos_taurus
ENSSDUG00000007202	rpp40	99	36.695	ENSCJAG00000021373	RPP40	98	36.695	Callithrix_jacchus
ENSSDUG00000007202	rpp40	99	38.095	ENSCAFG00000009435	RPP40	98	38.095	Canis_familiaris
ENSSDUG00000007202	rpp40	99	38.095	ENSCAFG00020013380	RPP40	98	38.095	Canis_lupus_dingo
ENSSDUG00000007202	rpp40	99	38.202	ENSCHIG00000016849	RPP40	99	38.000	Capra_hircus
ENSSDUG00000007202	rpp40	99	36.695	ENSTSYG00000032857	RPP40	98	36.695	Carlito_syrichta
ENSSDUG00000007202	rpp40	90	35.494	ENSCAPG00000004957	RPP40	97	35.494	Cavia_aperea
ENSSDUG00000007202	rpp40	99	39.216	ENSCPOG00000005855	RPP40	98	39.216	Cavia_porcellus
ENSSDUG00000007202	rpp40	99	37.255	ENSCCAG00000019809	RPP40	98	37.255	Cebus_capucinus
ENSSDUG00000007202	rpp40	99	37.535	ENSCATG00000038787	RPP40	98	37.535	Cercocebus_atys
ENSSDUG00000007202	rpp40	99	38.095	ENSCLAG00000003235	RPP40	98	38.095	Chinchilla_lanigera
ENSSDUG00000007202	rpp40	99	36.975	ENSCSAG00000007307	RPP40	98	36.975	Chlorocebus_sabaeus
ENSSDUG00000007202	rpp40	57	42.500	ENSCHOG00000005856	-	76	42.500	Choloepus_hoffmanni
ENSSDUG00000007202	rpp40	99	39.496	ENSCPBG00000009003	RPP40	98	39.496	Chrysemys_picta_bellii
ENSSDUG00000007202	rpp40	99	37.255	ENSCANG00000033965	RPP40	98	37.255	Colobus_angolensis_palliatus
ENSSDUG00000007202	rpp40	98	36.441	ENSCGRG00001018328	Rpp40	98	36.441	Cricetulus_griseus_chok1gshd
ENSSDUG00000007202	rpp40	98	36.441	ENSCGRG00000011344	Rpp40	98	36.441	Cricetulus_griseus_crigri
ENSSDUG00000007202	rpp40	100	61.408	ENSCSEG00000015006	-	100	61.690	Cynoglossus_semilaevis
ENSSDUG00000007202	rpp40	74	56.391	ENSCVAG00000012169	rpp40	100	57.143	Cyprinodon_variegatus
ENSSDUG00000007202	rpp40	100	50.970	ENSDARG00000017605	rpp40	100	50.970	Danio_rerio
ENSSDUG00000007202	rpp40	80	35.739	ENSDNOG00000048136	RPP40	98	35.739	Dasypus_novemcinctus
ENSSDUG00000007202	rpp40	99	31.165	ENSDORG00000011196	-	98	31.165	Dipodomys_ordii
ENSSDUG00000007202	rpp40	99	37.535	ENSDORG00000029944	-	98	37.535	Dipodomys_ordii
ENSSDUG00000007202	rpp40	99	31.653	ENSETEG00000007458	RPP40	98	31.653	Echinops_telfairi
ENSSDUG00000007202	rpp40	98	37.746	ENSEBUG00000000386	rpp40	99	38.006	Eptatretus_burgeri
ENSSDUG00000007202	rpp40	99	38.655	ENSEASG00005012116	RPP40	79	38.655	Equus_asinus_asinus
ENSSDUG00000007202	rpp40	99	38.936	ENSECAG00000017247	RPP40	79	38.936	Equus_caballus
ENSSDUG00000007202	rpp40	80	30.903	ENSEEUG00000012087	RPP40	97	30.903	Erinaceus_europaeus
ENSSDUG00000007202	rpp40	99	51.821	ENSELUG00000017004	rpp40	99	51.821	Esox_lucius
ENSSDUG00000007202	rpp40	99	37.255	ENSFCAG00000009249	RPP40	98	37.255	Felis_catus
ENSSDUG00000007202	rpp40	86	38.462	ENSFALG00000013166	RPP40	99	38.462	Ficedula_albicollis
ENSSDUG00000007202	rpp40	80	30.450	ENSFDAG00000000265	-	99	30.450	Fukomys_damarensis
ENSSDUG00000007202	rpp40	99	37.535	ENSFDAG00000013001	-	98	37.535	Fukomys_damarensis
ENSSDUG00000007202	rpp40	100	70.339	ENSFHEG00000021429	rpp40	89	70.339	Fundulus_heteroclitus
ENSSDUG00000007202	rpp40	89	46.395	ENSGMOG00000018653	rpp40	100	46.395	Gadus_morhua
ENSSDUG00000007202	rpp40	99	37.465	ENSGALG00000036074	RPP40	98	37.465	Gallus_gallus
ENSSDUG00000007202	rpp40	84	56.757	ENSGAFG00000004189	-	100	56.757	Gambusia_affinis
ENSSDUG00000007202	rpp40	100	78.814	ENSGACG00000002472	rpp40	100	78.814	Gasterosteus_aculeatus
ENSSDUG00000007202	rpp40	99	39.776	ENSGAGG00000012918	RPP40	98	39.776	Gopherus_agassizii
ENSSDUG00000007202	rpp40	99	37.535	ENSGGOG00000013764	RPP40	98	37.535	Gorilla_gorilla
ENSSDUG00000007202	rpp40	92	70.213	ENSHBUG00000009378	rpp40	96	70.213	Haplochromis_burtoni
ENSSDUG00000007202	rpp40	99	38.095	ENSHGLG00000004871	RPP40	98	38.095	Heterocephalus_glaber_female
ENSSDUG00000007202	rpp40	99	38.095	ENSHGLG00100002080	RPP40	98	38.095	Heterocephalus_glaber_male
ENSSDUG00000007202	rpp40	98	51.585	ENSHCOG00000013264	-	94	51.585	Hippocampus_comes
ENSSDUG00000007202	rpp40	100	50.418	ENSIPUG00000008951	RPP40	100	50.418	Ictalurus_punctatus
ENSSDUG00000007202	rpp40	99	37.815	ENSSTOG00000011199	RPP40	98	37.815	Ictidomys_tridecemlineatus
ENSSDUG00000007202	rpp40	99	38.764	ENSJJAG00000020629	Rpp40	98	38.764	Jaculus_jaculus
ENSSDUG00000007202	rpp40	100	75.989	ENSKMAG00000019358	rpp40	100	75.989	Kryptolebias_marmoratus
ENSSDUG00000007202	rpp40	100	79.944	ENSLBEG00000022724	rpp40	100	79.944	Labrus_bergylta
ENSSDUG00000007202	rpp40	100	41.551	ENSLACG00000014848	RPP40	100	41.551	Latimeria_chalumnae
ENSSDUG00000007202	rpp40	100	44.598	ENSLOCG00000011650	rpp40	99	44.598	Lepisosteus_oculatus
ENSSDUG00000007202	rpp40	82	39.262	ENSLAFG00000007530	RPP40	98	39.262	Loxodonta_africana
ENSSDUG00000007202	rpp40	99	37.255	ENSMFAG00000043100	RPP40	98	37.255	Macaca_fascicularis
ENSSDUG00000007202	rpp40	99	37.255	ENSMMUG00000004966	RPP40	98	37.255	Macaca_mulatta
ENSSDUG00000007202	rpp40	99	36.975	ENSMNEG00000041986	RPP40	98	37.248	Macaca_nemestrina
ENSSDUG00000007202	rpp40	99	33.613	ENSMLEG00000040851	RPP40	100	33.613	Mandrillus_leucophaeus
ENSSDUG00000007202	rpp40	100	87.006	ENSMAMG00000019551	rpp40	99	87.006	Mastacembelus_armatus
ENSSDUG00000007202	rpp40	99	75.921	ENSMZEG00005019475	rpp40	99	75.921	Maylandia_zebra
ENSSDUG00000007202	rpp40	89	39.752	ENSMGAG00000004009	RPP40	89	39.752	Meleagris_gallopavo
ENSSDUG00000007202	rpp40	99	37.815	ENSMAUG00000010268	Rpp40	98	37.815	Mesocricetus_auratus
ENSSDUG00000007202	rpp40	99	39.776	ENSMICG00000003297	RPP40	98	37.389	Microcebus_murinus
ENSSDUG00000007202	rpp40	99	38.655	ENSMOCG00000000305	Rpp40	98	38.655	Microtus_ochrogaster
ENSSDUG00000007202	rpp40	100	65.294	ENSMMOG00000020591	-	100	65.294	Mola_mola
ENSSDUG00000007202	rpp40	99	37.989	ENSMODG00000009826	RPP40	98	37.989	Monodelphis_domestica
ENSSDUG00000007202	rpp40	100	85.028	ENSMALG00000020133	rpp40	100	85.028	Monopterus_albus
ENSSDUG00000007202	rpp40	99	38.655	MGP_CAROLIEiJ_G0018429	Rpp40	98	38.655	Mus_caroli
ENSSDUG00000007202	rpp40	99	38.375	ENSMUSG00000021418	Rpp40	98	38.375	Mus_musculus
ENSSDUG00000007202	rpp40	99	37.815	MGP_PahariEiJ_G0019497	Rpp40	98	37.815	Mus_pahari
ENSSDUG00000007202	rpp40	99	38.655	MGP_SPRETEiJ_G0019309	Rpp40	98	38.655	Mus_spretus
ENSSDUG00000007202	rpp40	99	39.216	ENSMPUG00000000530	RPP40	92	39.216	Mustela_putorius_furo
ENSSDUG00000007202	rpp40	99	40.336	ENSMLUG00000000501	RPP40	98	40.336	Myotis_lucifugus
ENSSDUG00000007202	rpp40	94	34.320	ENSNGAG00000022529	-	98	34.320	Nannospalax_galili
ENSSDUG00000007202	rpp40	99	37.815	ENSNGAG00000023955	-	98	37.815	Nannospalax_galili
ENSSDUG00000007202	rpp40	88	71.477	ENSNBRG00000017465	rpp40	86	71.523	Neolamprologus_brichardi
ENSSDUG00000007202	rpp40	99	37.255	ENSNLEG00000034397	RPP40	98	37.255	Nomascus_leucogenys
ENSSDUG00000007202	rpp40	99	33.894	ENSMEUG00000005300	RPP40	98	33.894	Notamacropus_eugenii
ENSSDUG00000007202	rpp40	99	36.695	ENSODEG00000018153	-	98	36.695	Octodon_degus
ENSSDUG00000007202	rpp40	99	38.095	ENSODEG00000007255	-	98	38.095	Octodon_degus
ENSSDUG00000007202	rpp40	88	36.093	ENSODEG00000006170	-	100	36.093	Octodon_degus
ENSSDUG00000007202	rpp40	99	75.071	ENSONIG00000014016	rpp40	99	75.071	Oreochromis_niloticus
ENSSDUG00000007202	rpp40	82	40.468	ENSOANG00000001200	RPP40	98	40.468	Ornithorhynchus_anatinus
ENSSDUG00000007202	rpp40	98	40.169	ENSOCUG00000000354	RPP40	98	40.169	Oryctolagus_cuniculus
ENSSDUG00000007202	rpp40	99	69.231	ENSORLG00000008242	-	99	69.231	Oryzias_latipes
ENSSDUG00000007202	rpp40	99	69.231	ENSORLG00020013745	-	90	69.231	Oryzias_latipes_hni
ENSSDUG00000007202	rpp40	99	69.516	ENSORLG00015000887	-	99	69.516	Oryzias_latipes_hsok
ENSSDUG00000007202	rpp40	99	69.516	ENSOMEG00000002747	rpp40	99	69.516	Oryzias_melastigma
ENSSDUG00000007202	rpp40	99	39.496	ENSOGAG00000006055	RPP40	98	39.496	Otolemur_garnettii
ENSSDUG00000007202	rpp40	89	37.963	ENSOARG00000018783	RPP40	99	38.667	Ovis_aries
ENSSDUG00000007202	rpp40	99	37.255	ENSPPAG00000023703	RPP40	98	37.255	Pan_paniscus
ENSSDUG00000007202	rpp40	99	37.255	ENSPPRG00000005612	RPP40	98	37.255	Panthera_pardus
ENSSDUG00000007202	rpp40	99	35.278	ENSPTIG00000018847	RPP40	98	35.278	Panthera_tigris_altaica
ENSSDUG00000007202	rpp40	99	36.975	ENSPTRG00000017690	RPP40	98	36.975	Pan_troglodytes
ENSSDUG00000007202	rpp40	99	37.255	ENSPANG00000017865	RPP40	98	37.255	Papio_anubis
ENSSDUG00000007202	rpp40	100	47.500	ENSPKIG00000006311	rpp40	100	47.500	Paramormyrops_kingsleyae
ENSSDUG00000007202	rpp40	64	39.367	ENSPSIG00000007854	RPP40	99	39.367	Pelodiscus_sinensis
ENSSDUG00000007202	rpp40	91	34.405	ENSPEMG00000020809	Rpp40	95	31.269	Peromyscus_maniculatus_bairdii
ENSSDUG00000007202	rpp40	76	39.928	ENSPMAG00000008412	rpp40	99	39.928	Petromyzon_marinus
ENSSDUG00000007202	rpp40	99	37.535	ENSPCIG00000010682	RPP40	98	37.535	Phascolarctos_cinereus
ENSSDUG00000007202	rpp40	100	65.449	ENSPFOG00000011460	rpp40	99	65.449	Poecilia_formosa
ENSSDUG00000007202	rpp40	100	65.537	ENSPLAG00000001334	rpp40	100	65.537	Poecilia_latipinna
ENSSDUG00000007202	rpp40	100	66.667	ENSPMEG00000007721	rpp40	100	66.667	Poecilia_mexicana
ENSSDUG00000007202	rpp40	100	66.102	ENSPREG00000009215	rpp40	100	66.102	Poecilia_reticulata
ENSSDUG00000007202	rpp40	99	37.535	ENSPPYG00000016194	RPP40	98	37.535	Pongo_abelii
ENSSDUG00000007202	rpp40	51	39.444	ENSPCAG00000002700	-	97	39.444	Procavia_capensis
ENSSDUG00000007202	rpp40	99	37.815	ENSPCOG00000003907	RPP40	98	37.815	Propithecus_coquereli
ENSSDUG00000007202	rpp40	99	38.095	ENSPVAG00000011325	RPP40	98	38.095	Pteropus_vampyrus
ENSSDUG00000007202	rpp40	84	69.932	ENSPNYG00000004432	rpp40	100	69.932	Pundamilia_nyererei
ENSSDUG00000007202	rpp40	100	48.753	ENSPNAG00000019125	rpp40	100	48.753	Pygocentrus_nattereri
ENSSDUG00000007202	rpp40	99	38.655	ENSRNOG00000016226	Rpp40	98	38.655	Rattus_norvegicus
ENSSDUG00000007202	rpp40	99	36.975	ENSRBIG00000035800	RPP40	98	37.248	Rhinopithecus_bieti
ENSSDUG00000007202	rpp40	99	36.975	ENSRROG00000039116	RPP40	98	36.975	Rhinopithecus_roxellana
ENSSDUG00000007202	rpp40	99	37.255	ENSSBOG00000020297	RPP40	98	37.255	Saimiri_boliviensis_boliviensis
ENSSDUG00000007202	rpp40	75	38.686	ENSSHAG00000002102	RPP40	99	38.686	Sarcophilus_harrisii
ENSSDUG00000007202	rpp40	100	49.167	ENSSFOG00015001142	rpp40	81	49.167	Scleropages_formosus
ENSSDUG00000007202	rpp40	100	99.435	ENSSLDG00000017563	rpp40	100	99.435	Seriola_lalandi_dorsalis
ENSSDUG00000007202	rpp40	99	39.216	ENSSPUG00000017487	-	98	39.216	Sphenodon_punctatus
ENSSDUG00000007202	rpp40	81	36.610	ENSSPUG00000018950	-	100	36.610	Sphenodon_punctatus
ENSSDUG00000007202	rpp40	100	79.096	ENSSPAG00000022716	rpp40	100	79.096	Stegastes_partitus
ENSSDUG00000007202	rpp40	99	39.496	ENSSSCG00000000998	RPP40	99	39.404	Sus_scrofa
ENSSDUG00000007202	rpp40	50	42.529	ENSTGUG00000015246	-	98	42.529	Taeniopygia_guttata
ENSSDUG00000007202	rpp40	99	40.056	ENSTGUG00000002258	-	99	40.056	Taeniopygia_guttata
ENSSDUG00000007202	rpp40	99	73.864	ENSTRUG00000003755	rpp40	99	73.864	Takifugu_rubripes
ENSSDUG00000007202	rpp40	100	71.186	ENSTNIG00000003077	rpp40	100	71.186	Tetraodon_nigroviridis
ENSSDUG00000007202	rpp40	100	33.795	ENSTTRG00000007319	RPP40	99	33.795	Tursiops_truncatus
ENSSDUG00000007202	rpp40	99	38.095	ENSUAMG00000002159	RPP40	98	38.095	Ursus_americanus
ENSSDUG00000007202	rpp40	99	38.095	ENSUMAG00000018639	RPP40	92	38.095	Ursus_maritimus
ENSSDUG00000007202	rpp40	99	38.095	ENSVVUG00000005451	RPP40	98	38.095	Vulpes_vulpes
ENSSDUG00000007202	rpp40	99	38.268	ENSXETG00000017617	rpp40	99	38.268	Xenopus_tropicalis
ENSSDUG00000007202	rpp40	100	51.594	ENSXMAG00000024940	rpp40	99	51.594	Xiphophorus_maculatus