EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000007307 (Gene tree)
Gene ID: 111225296
Gene Symbol: nob1
Alias: fc27e05|si:ch73-167i17.3|wu:fc27e05
Full Name: NIN1 (RPN12) binding protein 1 homolog
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 11652 bases
Position: chrBDQW01000012.1:1428937-1440588
Accession: 111225296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009976	NOB1_Zn_bind	PF08772.11	1.8e-31	1	1
ENSSDUP00000009957	NOB1_Zn_bind	PF08772.11	1.9e-31	1	1
ENSSDUP00000010007	NOB1_Zn_bind	PF08772.11	2.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000010149	-	5590	-	ENSSDUP00000009957	493 (aa)	-	-
ENSSDUT00000010199	-	1245	-	ENSSDUP00000010007	414 (aa)	-	-
ENSSDUT00000010168	-	5544	XM_022750072	ENSSDUP00000009976	477 (aa)	XP_022605793	UPI000BBEA04B

Gene Model

Click here to download ENSSDUG00000007307's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007307's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007307	nob1	100	63.484	ENSG00000141101	NOB1	97	72.727	Homo_sapiens
ENSSDUG00000007307	nob1	100	69.324	ENSAPOG00000008241	nob1	100	69.324	Acanthochromis_polyacanthus
ENSSDUG00000007307	nob1	99	64.904	ENSAMEG00000006706	NOB1	98	64.183	Ailuropoda_melanoleuca
ENSSDUG00000007307	nob1	99	75.644	ENSACIG00000001503	nob1	100	75.644	Amphilophus_citrinellus
ENSSDUG00000007307	nob1	100	78.261	ENSAOCG00000006533	nob1	100	77.295	Amphiprion_ocellaris
ENSSDUG00000007307	nob1	100	78.502	ENSAPEG00000000032	-	100	78.744	Amphiprion_percula
ENSSDUG00000007307	nob1	100	78.502	ENSAPEG00000000029	nob1	100	78.744	Amphiprion_percula
ENSSDUG00000007307	nob1	100	81.535	ENSATEG00000014585	nob1	100	81.535	Anabas_testudineus
ENSSDUG00000007307	nob1	100	63.033	ENSACAG00000003697	NOB1	88	63.033	Anolis_carolinensis
ENSSDUG00000007307	nob1	100	63.397	ENSANAG00000036611	NOB1	100	62.648	Aotus_nancymaae
ENSSDUG00000007307	nob1	100	77.292	ENSACLG00000024897	nob1	100	78.935	Astatotilapia_calliptera
ENSSDUG00000007307	nob1	94	65.258	ENSAMXG00000003642	nob1	100	65.962	Astyanax_mexicanus
ENSSDUG00000007307	nob1	100	63.084	ENSBTAG00000020633	NOB1	100	63.981	Bos_taurus
ENSSDUG00000007307	nob1	97	32.346	WBGene00021843	Y54E10BR.4	94	37.657	Caenorhabditis_elegans
ENSSDUG00000007307	nob1	100	64.115	ENSCJAG00000015230	NOB1	100	63.357	Callithrix_jacchus
ENSSDUG00000007307	nob1	99	63.679	ENSCAFG00000020251	NOB1	99	64.423	Canis_familiaris
ENSSDUG00000007307	nob1	99	63.679	ENSCAFG00020020297	NOB1	99	64.423	Canis_lupus_dingo
ENSSDUG00000007307	nob1	100	64.493	ENSCHIG00000027022	NOB1	100	64.493	Capra_hircus
ENSSDUG00000007307	nob1	100	64.578	ENSTSYG00000003084	NOB1	100	64.337	Carlito_syrichta
ENSSDUG00000007307	nob1	84	61.383	ENSCAPG00000015542	NOB1	100	61.143	Cavia_aperea
ENSSDUG00000007307	nob1	100	63.133	ENSCPOG00000022538	NOB1	100	62.919	Cavia_porcellus
ENSSDUG00000007307	nob1	100	63.420	ENSCCAG00000023773	NOB1	100	62.441	Cebus_capucinus
ENSSDUG00000007307	nob1	99	62.802	ENSCATG00000039487	NOB1	99	62.530	Cercocebus_atys
ENSSDUG00000007307	nob1	84	60.983	ENSCLAG00000005926	NOB1	100	61.561	Chinchilla_lanigera
ENSSDUG00000007307	nob1	100	62.530	ENSCSAG00000004158	NOB1	100	63.246	Chlorocebus_sabaeus
ENSSDUG00000007307	nob1	99	59.806	ENSCHOG00000011047	NOB1	99	59.806	Choloepus_hoffmanni
ENSSDUG00000007307	nob1	99	64.455	ENSCPBG00000027035	NOB1	92	64.252	Chrysemys_picta_bellii
ENSSDUG00000007307	nob1	99	47.700	ENSCING00000023441	-	99	47.585	Ciona_intestinalis
ENSSDUG00000007307	nob1	99	46.154	ENSCSAVG00000009081	-	99	46.635	Ciona_savignyi
ENSSDUG00000007307	nob1	100	64.251	ENSCGRG00001009255	Nob1	95	64.493	Cricetulus_griseus_chok1gshd
ENSSDUG00000007307	nob1	100	64.251	ENSCGRG00000010869	Nob1	100	64.493	Cricetulus_griseus_crigri
ENSSDUG00000007307	nob1	91	69.270	ENSCSEG00000019657	nob1	96	70.202	Cynoglossus_semilaevis
ENSSDUG00000007307	nob1	99	63.205	ENSDARG00000016080	nob1	100	64.560	Danio_rerio
ENSSDUG00000007307	nob1	100	64.508	ENSDNOG00000041643	NOB1	100	64.133	Dasypus_novemcinctus
ENSSDUG00000007307	nob1	100	64.251	ENSDORG00000000483	Nob1	100	64.251	Dipodomys_ordii
ENSSDUG00000007307	nob1	98	36.232	FBgn0030177	CG2972	99	37.045	Drosophila_melanogaster
ENSSDUG00000007307	nob1	59	52.227	ENSETEG00000000011	-	59	52.227	Echinops_telfairi
ENSSDUG00000007307	nob1	100	43.478	ENSEBUG00000004464	nob1	99	43.237	Eptatretus_burgeri
ENSSDUG00000007307	nob1	100	62.322	ENSEASG00005021356	NOB1	84	62.796	Equus_asinus_asinus
ENSSDUG00000007307	nob1	100	62.559	ENSECAG00000023748	NOB1	81	63.033	Equus_caballus
ENSSDUG00000007307	nob1	68	49.291	ENSEEUG00000014384	NOB1	66	49.117	Erinaceus_europaeus
ENSSDUG00000007307	nob1	100	66.966	ENSELUG00000016199	nob1	100	64.798	Esox_lucius
ENSSDUG00000007307	nob1	100	64.133	ENSFCAG00000002958	NOB1	100	64.133	Felis_catus
ENSSDUG00000007307	nob1	50	69.444	ENSFALG00000002747	NOB1	86	69.585	Ficedula_albicollis
ENSSDUG00000007307	nob1	100	63.285	ENSFDAG00000009239	NOB1	100	63.285	Fukomys_damarensis
ENSSDUG00000007307	nob1	56	76.296	ENSFHEG00000007657	nob1	68	75.185	Fundulus_heteroclitus
ENSSDUG00000007307	nob1	99	73.236	ENSGMOG00000010638	nob1	99	73.966	Gadus_morhua
ENSSDUG00000007307	nob1	99	58.411	ENSGALG00000000693	NOB1	99	58.824	Gallus_gallus
ENSSDUG00000007307	nob1	100	67.155	ENSGAFG00000006104	nob1	100	68.267	Gambusia_affinis
ENSSDUG00000007307	nob1	99	77.295	ENSGACG00000017552	nob1	99	77.778	Gasterosteus_aculeatus
ENSSDUG00000007307	nob1	99	64.303	ENSGAGG00000003902	NOB1	99	63.551	Gopherus_agassizii
ENSSDUG00000007307	nob1	100	63.484	ENSGGOG00000025456	NOB1	100	63.208	Gorilla_gorilla
ENSSDUG00000007307	nob1	100	80.000	ENSHBUG00000002580	nob1	100	79.904	Haplochromis_burtoni
ENSSDUG00000007307	nob1	100	63.571	ENSHGLG00000014260	NOB1	100	63.333	Heterocephalus_glaber_female
ENSSDUG00000007307	nob1	100	63.855	ENSHGLG00100013978	NOB1	100	63.373	Heterocephalus_glaber_male
ENSSDUG00000007307	nob1	99	66.746	ENSHCOG00000006699	nob1	100	66.746	Hippocampus_comes
ENSSDUG00000007307	nob1	100	62.786	ENSIPUG00000007579	nob1	100	61.746	Ictalurus_punctatus
ENSSDUG00000007307	nob1	100	64.251	ENSSTOG00000001204	NOB1	100	63.942	Ictidomys_tridecemlineatus
ENSSDUG00000007307	nob1	99	63.902	ENSJJAG00000015543	Nob1	99	63.902	Jaculus_jaculus
ENSSDUG00000007307	nob1	100	77.218	ENSKMAG00000018220	nob1	100	77.273	Kryptolebias_marmoratus
ENSSDUG00000007307	nob1	100	77.536	ENSLBEG00000026375	nob1	100	77.831	Labrus_bergylta
ENSSDUG00000007307	nob1	100	62.557	ENSLACG00000006973	NOB1	98	64.155	Latimeria_chalumnae
ENSSDUG00000007307	nob1	100	64.062	ENSLOCG00000001411	nob1	99	64.955	Lepisosteus_oculatus
ENSSDUG00000007307	nob1	100	62.945	ENSLAFG00000008978	NOB1	100	63.420	Loxodonta_africana
ENSSDUG00000007307	nob1	100	62.679	ENSMFAG00000030131	NOB1	100	62.884	Macaca_fascicularis
ENSSDUG00000007307	nob1	100	63.007	ENSMMUG00000006506	NOB1	100	63.723	Macaca_mulatta
ENSSDUG00000007307	nob1	100	62.768	ENSMNEG00000028829	NOB1	100	57.075	Macaca_nemestrina
ENSSDUG00000007307	nob1	100	62.530	ENSMLEG00000032913	NOB1	100	62.264	Mandrillus_leucophaeus
ENSSDUG00000007307	nob1	100	81.159	ENSMZEG00005028346	nob1	100	80.193	Maylandia_zebra
ENSSDUG00000007307	nob1	70	67.508	ENSMZEG00005003827	-	90	75.000	Maylandia_zebra
ENSSDUG00000007307	nob1	62	65.038	ENSMGAG00000008675	NOB1	98	65.543	Meleagris_gallopavo
ENSSDUG00000007307	nob1	100	61.836	ENSMAUG00000013554	Nob1	100	62.077	Mesocricetus_auratus
ENSSDUG00000007307	nob1	100	63.723	ENSMICG00000012123	NOB1	100	63.723	Microcebus_murinus
ENSSDUG00000007307	nob1	100	64.251	ENSMOCG00000010370	Nob1	100	64.734	Microtus_ochrogaster
ENSSDUG00000007307	nob1	100	77.594	ENSMMOG00000002120	nob1	100	78.177	Mola_mola
ENSSDUG00000007307	nob1	99	63.033	ENSMODG00000002677	NOB1	99	63.270	Monodelphis_domestica
ENSSDUG00000007307	nob1	99	79.876	ENSMALG00000014580	nob1	100	80.083	Monopterus_albus
ENSSDUG00000007307	nob1	100	63.768	MGP_CAROLIEiJ_G0031536	Nob1	98	63.768	Mus_caroli
ENSSDUG00000007307	nob1	100	64.251	ENSMUSG00000003848	Nob1	100	63.768	Mus_musculus
ENSSDUG00000007307	nob1	100	63.527	MGP_PahariEiJ_G0023136	Nob1	100	63.527	Mus_pahari
ENSSDUG00000007307	nob1	100	64.251	MGP_SPRETEiJ_G0032654	Nob1	98	64.251	Mus_spretus
ENSSDUG00000007307	nob1	99	63.789	ENSMPUG00000007483	NOB1	91	63.615	Mustela_putorius_furo
ENSSDUG00000007307	nob1	100	63.462	ENSMLUG00000006667	NOB1	100	63.420	Myotis_lucifugus
ENSSDUG00000007307	nob1	100	64.251	ENSNGAG00000008627	Nob1	100	64.010	Nannospalax_galili
ENSSDUG00000007307	nob1	100	62.530	ENSNLEG00000005572	NOB1	100	62.264	Nomascus_leucogenys
ENSSDUG00000007307	nob1	79	61.194	ENSOPRG00000006721	NOB1	100	59.941	Ochotona_princeps
ENSSDUG00000007307	nob1	99	63.081	ENSODEG00000014376	NOB1	99	62.651	Octodon_degus
ENSSDUG00000007307	nob1	99	75.792	ENSONIG00000003319	nob1	100	76.471	Oreochromis_niloticus
ENSSDUG00000007307	nob1	84	64.489	ENSOCUG00000004400	NOB1	100	63.920	Oryctolagus_cuniculus
ENSSDUG00000007307	nob1	100	77.053	ENSORLG00000018862	nob1	100	75.837	Oryzias_latipes
ENSSDUG00000007307	nob1	100	76.812	ENSORLG00020014687	nob1	100	77.053	Oryzias_latipes_hni
ENSSDUG00000007307	nob1	100	76.087	ENSORLG00015012156	nob1	100	75.121	Oryzias_latipes_hsok
ENSSDUG00000007307	nob1	100	73.166	ENSOMEG00000022722	nob1	100	73.375	Oryzias_melastigma
ENSSDUG00000007307	nob1	99	58.213	ENSOGAG00000004590	NOB1	99	58.753	Otolemur_garnettii
ENSSDUG00000007307	nob1	100	63.443	ENSOARG00000003606	NOB1	100	64.200	Ovis_aries
ENSSDUG00000007307	nob1	100	63.007	ENSPPAG00000040257	NOB1	100	62.736	Pan_paniscus
ENSSDUG00000007307	nob1	97	57.463	ENSPPAG00000003317	-	100	57.711	Pan_paniscus
ENSSDUG00000007307	nob1	100	63.571	ENSPPRG00000016949	NOB1	100	64.048	Panthera_pardus
ENSSDUG00000007307	nob1	100	63.571	ENSPTIG00000011234	NOB1	100	64.048	Panthera_tigris_altaica
ENSSDUG00000007307	nob1	100	63.007	ENSPTRG00000008285	NOB1	100	62.736	Pan_troglodytes
ENSSDUG00000007307	nob1	100	63.246	ENSPANG00000015858	NOB1	100	63.246	Papio_anubis
ENSSDUG00000007307	nob1	100	67.512	ENSPKIG00000020293	nob1	100	69.882	Paramormyrops_kingsleyae
ENSSDUG00000007307	nob1	99	60.839	ENSPSIG00000012477	NOB1	100	62.264	Pelodiscus_sinensis
ENSSDUG00000007307	nob1	99	69.976	ENSPMGG00000023476	nob1	100	70.944	Periophthalmus_magnuspinnatus
ENSSDUG00000007307	nob1	100	64.251	ENSPEMG00000010995	Nob1	100	64.251	Peromyscus_maniculatus_bairdii
ENSSDUG00000007307	nob1	84	68.144	ENSPFOG00000000027	nob1	100	69.421	Poecilia_formosa
ENSSDUG00000007307	nob1	62	74.419	ENSPLAG00000011546	nob1	91	74.419	Poecilia_latipinna
ENSSDUG00000007307	nob1	100	69.471	ENSPMEG00000023435	nob1	100	69.471	Poecilia_mexicana
ENSSDUG00000007307	nob1	99	67.782	ENSPREG00000007675	nob1	100	68.344	Poecilia_reticulata
ENSSDUG00000007307	nob1	100	63.158	ENSPPYG00000007509	NOB1	100	63.357	Pongo_abelii
ENSSDUG00000007307	nob1	100	60.757	ENSPCAG00000001527	NOB1	100	60.757	Procavia_capensis
ENSSDUG00000007307	nob1	100	64.096	ENSPCOG00000025515	NOB1	100	63.855	Propithecus_coquereli
ENSSDUG00000007307	nob1	78	43.558	ENSPVAG00000013330	NOB1	78	43.558	Pteropus_vampyrus
ENSSDUG00000007307	nob1	100	78.060	ENSPNYG00000018449	nob1	100	78.753	Pundamilia_nyererei
ENSSDUG00000007307	nob1	100	63.146	ENSPNAG00000004244	nob1	99	63.946	Pygocentrus_nattereri
ENSSDUG00000007307	nob1	100	63.221	ENSRNOG00000021890	Nob1	100	63.221	Rattus_norvegicus
ENSSDUG00000007307	nob1	100	62.768	ENSRBIG00000019599	NOB1	100	62.500	Rhinopithecus_bieti
ENSSDUG00000007307	nob1	100	62.768	ENSRROG00000033419	NOB1	100	62.500	Rhinopithecus_roxellana
ENSSDUG00000007307	nob1	58	33.945	YOR056C	NOB1	65	37.778	Saccharomyces_cerevisiae
ENSSDUG00000007307	nob1	84	61.538	ENSSBOG00000029042	NOB1	89	60.674	Saimiri_boliviensis_boliviensis
ENSSDUG00000007307	nob1	99	65.072	ENSSHAG00000015387	NOB1	99	65.072	Sarcophilus_harrisii
ENSSDUG00000007307	nob1	100	66.819	ENSSFOG00015008503	nob1	100	68.421	Scleropages_formosus
ENSSDUG00000007307	nob1	100	79.210	ENSSMAG00000003064	nob1	100	79.567	Scophthalmus_maximus
ENSSDUG00000007307	nob1	68	100.000	ENSSLDG00000011459	-	95	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000007307	nob1	94	58.270	ENSSPUG00000005621	NOB1	99	62.931	Sphenodon_punctatus
ENSSDUG00000007307	nob1	100	79.227	ENSSPAG00000022362	nob1	100	78.502	Stegastes_partitus
ENSSDUG00000007307	nob1	100	63.744	ENSSSCG00000002753	NOB1	100	63.723	Sus_scrofa
ENSSDUG00000007307	nob1	50	70.698	ENSTGUG00000008124	NOB1	93	70.698	Taeniopygia_guttata
ENSSDUG00000007307	nob1	99	73.402	ENSTRUG00000004780	nob1	100	74.312	Takifugu_rubripes
ENSSDUG00000007307	nob1	99	73.402	ENSTRUG00000023145	nob1	100	74.312	Takifugu_rubripes
ENSSDUG00000007307	nob1	99	75.895	ENSTNIG00000002552	nob1	100	76.850	Tetraodon_nigroviridis
ENSSDUG00000007307	nob1	59	55.378	ENSTBEG00000000690	NOB1	52	55.378	Tupaia_belangeri
ENSSDUG00000007307	nob1	60	63.922	ENSUAMG00000028135	NOB1	99	64.706	Ursus_americanus
ENSSDUG00000007307	nob1	99	63.309	ENSUMAG00000018658	NOB1	95	63.789	Ursus_maritimus
ENSSDUG00000007307	nob1	99	63.443	ENSVVUG00000017271	NOB1	99	64.183	Vulpes_vulpes
ENSSDUG00000007307	nob1	100	62.989	ENSXETG00000017874	nob1	99	62.989	Xenopus_tropicalis
ENSSDUG00000007307	nob1	84	67.816	ENSXCOG00000009734	nob1	100	68.966	Xiphophorus_couchianus
ENSSDUG00000007307	nob1	100	68.496	ENSXMAG00000017371	nob1	100	68.496	Xiphophorus_maculatus