EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000007345 (Gene tree)
Gene ID: 111232695
Gene Symbol: srp72
Alias: wu:fi03d11
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 13168 bases
Position: chrBDQW01000331.1:10293959-10307126
Accession: 111232695
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000010091	SRP72	PF08492.12	8.3e-21	1	1
ENSSDUP00000010054	SRP72	PF08492.12	8.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000010284	-	2037	-	ENSSDUP00000010091	678 (aa)	-	-
ENSSDUT00000010246	-	3940	XM_022760323	ENSSDUP00000010054	684 (aa)	XP_022616044	-

Gene Model

Click here to download ENSSDUG00000007345's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007345's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007345	srp72	96	77.523	ENSG00000174780	SRP72	99	76.866	Homo_sapiens
ENSSDUG00000007345	srp72	99	81.315	ENSAPOG00000019438	srp72	99	81.654	Acanthochromis_polyacanthus
ENSSDUG00000007345	srp72	95	77.950	ENSAMEG00000008469	SRP72	100	76.969	Ailuropoda_melanoleuca
ENSSDUG00000007345	srp72	98	93.582	ENSACIG00000000488	srp72	100	93.582	Amphilophus_citrinellus
ENSSDUG00000007345	srp72	98	94.162	ENSAOCG00000011256	srp72	100	94.162	Amphiprion_ocellaris
ENSSDUG00000007345	srp72	98	95.509	ENSAPEG00000001512	srp72	100	94.012	Amphiprion_percula
ENSSDUG00000007345	srp72	90	95.745	ENSATEG00000006781	srp72	100	95.735	Anabas_testudineus
ENSSDUG00000007345	srp72	97	76.888	ENSAPLG00000008751	SRP72	98	76.133	Anas_platyrhynchos
ENSSDUG00000007345	srp72	95	76.662	ENSACAG00000002381	SRP72	99	76.418	Anolis_carolinensis
ENSSDUG00000007345	srp72	94	77.795	ENSANAG00000020836	-	93	78.080	Aotus_nancymaae
ENSSDUG00000007345	srp72	98	94.311	ENSACLG00000014617	srp72	100	94.311	Astatotilapia_calliptera
ENSSDUG00000007345	srp72	96	83.817	ENSAMXG00000004011	srp72	100	83.408	Astyanax_mexicanus
ENSSDUG00000007345	srp72	96	77.064	ENSBTAG00000010593	SRP72	99	76.418	Bos_taurus
ENSSDUG00000007345	srp72	96	76.911	ENSCJAG00000017998	SRP72	99	76.269	Callithrix_jacchus
ENSSDUG00000007345	srp72	96	77.829	ENSCAFG00000002244	SRP72	99	77.164	Canis_familiaris
ENSSDUG00000007345	srp72	96	77.829	ENSCAFG00020027338	SRP72	98	77.740	Canis_lupus_dingo
ENSSDUG00000007345	srp72	96	75.573	ENSCHIG00000021465	SRP72	99	74.963	Capra_hircus
ENSSDUG00000007345	srp72	95	77.932	ENSTSYG00000010571	-	99	77.130	Carlito_syrichta
ENSSDUG00000007345	srp72	84	59.194	ENSCAPG00000016668	SRP72	100	67.829	Cavia_aperea
ENSSDUG00000007345	srp72	96	77.523	ENSCPOG00000000218	SRP72	99	76.716	Cavia_porcellus
ENSSDUG00000007345	srp72	94	77.760	ENSCCAG00000030683	-	93	78.045	Cebus_capucinus
ENSSDUG00000007345	srp72	96	75.385	ENSCCAG00000030830	-	99	74.775	Cebus_capucinus
ENSSDUG00000007345	srp72	96	62.117	ENSCATG00000045359	-	95	61.350	Cercocebus_atys
ENSSDUG00000007345	srp72	96	77.370	ENSCATG00000008072	SRP72	99	76.716	Cercocebus_atys
ENSSDUG00000007345	srp72	96	77.217	ENSCLAG00000003571	SRP72	99	76.567	Chinchilla_lanigera
ENSSDUG00000007345	srp72	96	73.130	ENSCSAG00000005079	SRP72	99	72.578	Chlorocebus_sabaeus
ENSSDUG00000007345	srp72	88	75.000	ENSCHOG00000013240	SRP72	90	74.359	Choloepus_hoffmanni
ENSSDUG00000007345	srp72	95	77.605	ENSCPBG00000015015	SRP72	99	77.096	Chrysemys_picta_bellii
ENSSDUG00000007345	srp72	94	40.422	ENSCING00000002417	-	93	41.615	Ciona_intestinalis
ENSSDUG00000007345	srp72	91	42.072	ENSCSAVG00000011288	-	92	42.138	Ciona_savignyi
ENSSDUG00000007345	srp72	96	77.370	ENSCANG00000041709	SRP72	99	76.716	Colobus_angolensis_palliatus
ENSSDUG00000007345	srp72	98	61.905	ENSCANG00000037920	-	98	53.130	Colobus_angolensis_palliatus
ENSSDUG00000007345	srp72	99	77.463	ENSCGRG00001013548	Srp72	99	76.716	Cricetulus_griseus_chok1gshd
ENSSDUG00000007345	srp72	94	77.795	ENSCGRG00000003013	Srp72	99	77.008	Cricetulus_griseus_crigri
ENSSDUG00000007345	srp72	96	92.462	ENSCSEG00000003616	srp72	100	92.515	Cynoglossus_semilaevis
ENSSDUG00000007345	srp72	89	93.924	ENSCVAG00000001520	srp72	100	93.924	Cyprinodon_variegatus
ENSSDUG00000007345	srp72	84	83.860	ENSDARG00000014139	srp72	99	83.502	Danio_rerio
ENSSDUG00000007345	srp72	96	73.313	ENSDNOG00000039012	SRP72	83	72.674	Dasypus_novemcinctus
ENSSDUG00000007345	srp72	95	77.245	ENSDORG00000000171	Srp72	99	76.497	Dipodomys_ordii
ENSSDUG00000007345	srp72	94	40.895	FBgn0038810	Srp72	94	41.401	Drosophila_melanogaster
ENSSDUG00000007345	srp72	95	77.640	ENSETEG00000005191	SRP72	99	76.946	Echinops_telfairi
ENSSDUG00000007345	srp72	72	63.415	ENSEBUG00000003696	srp72	97	63.673	Eptatretus_burgeri
ENSSDUG00000007345	srp72	96	77.523	ENSEASG00005017747	SRP72	99	76.866	Equus_asinus_asinus
ENSSDUG00000007345	srp72	96	77.523	ENSECAG00000006920	SRP72	99	76.866	Equus_caballus
ENSSDUG00000007345	srp72	98	85.587	ENSELUG00000022415	srp72	100	84.844	Esox_lucius
ENSSDUG00000007345	srp72	95	77.623	ENSFCAG00000027600	SRP72	99	78.109	Felis_catus
ENSSDUG00000007345	srp72	95	78.261	ENSFALG00000006713	SRP72	100	77.300	Ficedula_albicollis
ENSSDUG00000007345	srp72	96	76.911	ENSFDAG00000002014	-	99	76.269	Fukomys_damarensis
ENSSDUG00000007345	srp72	96	49.160	ENSFDAG00000009793	-	96	47.872	Fukomys_damarensis
ENSSDUG00000007345	srp72	100	90.365	ENSFHEG00000017652	srp72	95	90.365	Fundulus_heteroclitus
ENSSDUG00000007345	srp72	97	81.061	ENSGMOG00000005986	srp72	100	81.306	Gadus_morhua
ENSSDUG00000007345	srp72	95	78.227	ENSGALG00000011403	SRP72	99	76.751	Gallus_gallus
ENSSDUG00000007345	srp72	98	92.825	ENSGAFG00000017762	srp72	100	91.779	Gambusia_affinis
ENSSDUG00000007345	srp72	98	93.750	ENSGACG00000016749	srp72	100	93.750	Gasterosteus_aculeatus
ENSSDUG00000007345	srp72	85	78.534	ENSGAGG00000024611	SRP72	98	78.415	Gopherus_agassizii
ENSSDUG00000007345	srp72	96	77.217	ENSGGOG00000013234	-	99	76.567	Gorilla_gorilla
ENSSDUG00000007345	srp72	98	94.311	ENSHBUG00000020723	srp72	100	94.311	Haplochromis_burtoni
ENSSDUG00000007345	srp72	96	59.571	ENSHGLG00000018597	-	99	59.613	Heterocephalus_glaber_female
ENSSDUG00000007345	srp72	96	71.908	ENSHGLG00000005029	-	99	70.958	Heterocephalus_glaber_female
ENSSDUG00000007345	srp72	88	70.526	ENSHGLG00000010633	-	99	70.185	Heterocephalus_glaber_female
ENSSDUG00000007345	srp72	51	60.807	ENSHGLG00000003496	-	99	59.195	Heterocephalus_glaber_female
ENSSDUG00000007345	srp72	85	68.722	ENSHGLG00000003950	-	99	67.982	Heterocephalus_glaber_female
ENSSDUG00000007345	srp72	96	77.064	ENSHGLG00000009791	SRP72	99	76.418	Heterocephalus_glaber_female
ENSSDUG00000007345	srp72	96	71.908	ENSHGLG00100011236	-	99	70.958	Heterocephalus_glaber_male
ENSSDUG00000007345	srp72	96	77.064	ENSHGLG00100009021	SRP72	99	76.418	Heterocephalus_glaber_male
ENSSDUG00000007345	srp72	85	68.282	ENSHGLG00100017133	-	99	67.544	Heterocephalus_glaber_male
ENSSDUG00000007345	srp72	96	57.863	ENSHGLG00100009346	-	99	58.036	Heterocephalus_glaber_male
ENSSDUG00000007345	srp72	96	90.923	ENSHCOG00000013760	srp72	100	89.970	Hippocampus_comes
ENSSDUG00000007345	srp72	98	84.305	ENSIPUG00000000210	srp72	100	83.558	Ictalurus_punctatus
ENSSDUG00000007345	srp72	96	77.676	ENSSTOG00000007305	SRP72	99	77.015	Ictidomys_tridecemlineatus
ENSSDUG00000007345	srp72	95	77.449	ENSJJAG00000018324	Srp72	99	78.589	Jaculus_jaculus
ENSSDUG00000007345	srp72	98	91.330	ENSKMAG00000003776	srp72	100	89.985	Kryptolebias_marmoratus
ENSSDUG00000007345	srp72	96	84.332	ENSLOCG00000002628	srp72	98	83.812	Lepisosteus_oculatus
ENSSDUG00000007345	srp72	96	77.370	ENSLAFG00000018307	SRP72	99	76.716	Loxodonta_africana
ENSSDUG00000007345	srp72	96	77.217	ENSMFAG00000031065	SRP72	99	76.567	Macaca_fascicularis
ENSSDUG00000007345	srp72	96	63.037	ENSMFAG00000037164	-	97	62.693	Macaca_fascicularis
ENSSDUG00000007345	srp72	97	77.169	ENSMMUG00000016368	SRP72	98	76.408	Macaca_mulatta
ENSSDUG00000007345	srp72	84	68.182	ENSMMUG00000021262	-	95	68.182	Macaca_mulatta
ENSSDUG00000007345	srp72	96	77.217	ENSMNEG00000038065	-	99	76.567	Macaca_nemestrina
ENSSDUG00000007345	srp72	94	76.693	ENSMLEG00000030140	-	93	76.480	Mandrillus_leucophaeus
ENSSDUG00000007345	srp72	99	94.845	ENSMAMG00000014989	srp72	90	94.845	Mastacembelus_armatus
ENSSDUG00000007345	srp72	98	94.311	ENSMZEG00005003325	srp72	100	94.311	Maylandia_zebra
ENSSDUG00000007345	srp72	91	73.710	ENSMGAG00000008567	SRP72	100	76.119	Meleagris_gallopavo
ENSSDUG00000007345	srp72	97	77.273	ENSMAUG00000001237	Srp72	99	76.198	Mesocricetus_auratus
ENSSDUG00000007345	srp72	94	77.638	ENSMICG00000008507	-	93	77.920	Microcebus_murinus
ENSSDUG00000007345	srp72	99	77.164	ENSMOCG00000020309	Srp72	99	76.418	Microtus_ochrogaster
ENSSDUG00000007345	srp72	98	92.814	ENSMMOG00000002627	srp72	100	92.814	Mola_mola
ENSSDUG00000007345	srp72	95	74.184	ENSMODG00000020697	SRP72	99	73.433	Monodelphis_domestica
ENSSDUG00000007345	srp72	98	94.012	ENSMALG00000003747	srp72	100	94.205	Monopterus_albus
ENSSDUG00000007345	srp72	99	76.866	MGP_CAROLIEiJ_G0027323	Srp72	99	76.119	Mus_caroli
ENSSDUG00000007345	srp72	99	76.866	ENSMUSG00000036323	Srp72	99	76.119	Mus_musculus
ENSSDUG00000007345	srp72	98	77.259	MGP_PahariEiJ_G0017103	Srp72	99	78.338	Mus_pahari
ENSSDUG00000007345	srp72	99	76.866	MGP_SPRETEiJ_G0028317	Srp72	99	76.119	Mus_spretus
ENSSDUG00000007345	srp72	95	77.950	ENSMPUG00000004828	SRP72	99	77.015	Mustela_putorius_furo
ENSSDUG00000007345	srp72	95	77.519	ENSMLUG00000007344	SRP72	99	76.716	Myotis_lucifugus
ENSSDUG00000007345	srp72	99	77.761	ENSNGAG00000012595	Srp72	100	79.597	Nannospalax_galili
ENSSDUG00000007345	srp72	98	90.569	ENSNBRG00000014492	srp72	100	90.120	Neolamprologus_brichardi
ENSSDUG00000007345	srp72	96	72.282	ENSNLEG00000008806	-	99	71.642	Nomascus_leucogenys
ENSSDUG00000007345	srp72	95	66.719	ENSMEUG00000005164	SRP72	90	73.482	Notamacropus_eugenii
ENSSDUG00000007345	srp72	95	76.361	ENSOPRG00000012521	SRP72	99	75.522	Ochotona_princeps
ENSSDUG00000007345	srp72	95	75.776	ENSODEG00000012214	SRP72	99	75.075	Octodon_degus
ENSSDUG00000007345	srp72	98	94.135	ENSONIG00000001446	srp72	100	94.048	Oreochromis_niloticus
ENSSDUG00000007345	srp72	96	61.642	ENSOANG00000008562	SRP72	99	61.095	Ornithorhynchus_anatinus
ENSSDUG00000007345	srp72	96	77.642	ENSOCUG00000012226	SRP72	99	76.866	Oryctolagus_cuniculus
ENSSDUG00000007345	srp72	98	87.425	ENSORLG00000020418	srp72	99	88.174	Oryzias_latipes
ENSSDUG00000007345	srp72	99	86.033	ENSORLG00020009138	srp72	97	87.725	Oryzias_latipes_hni
ENSSDUG00000007345	srp72	98	87.275	ENSORLG00015018251	srp72	99	88.024	Oryzias_latipes_hsok
ENSSDUG00000007345	srp72	96	87.939	ENSOMEG00000022008	srp72	98	88.164	Oryzias_melastigma
ENSSDUG00000007345	srp72	96	78.287	ENSOGAG00000003578	SRP72	99	77.761	Otolemur_garnettii
ENSSDUG00000007345	srp72	96	76.911	ENSOARG00000004329	SRP72	99	76.269	Ovis_aries
ENSSDUG00000007345	srp72	98	55.873	ENSPPAG00000011428	-	95	55.539	Pan_paniscus
ENSSDUG00000007345	srp72	79	62.313	ENSPPAG00000032490	-	91	62.222	Pan_paniscus
ENSSDUG00000007345	srp72	96	77.523	ENSPPAG00000042265	SRP72	99	76.866	Pan_paniscus
ENSSDUG00000007345	srp72	95	77.795	ENSPPRG00000015991	SRP72	99	78.109	Panthera_pardus
ENSSDUG00000007345	srp72	95	77.795	ENSPTIG00000018786	SRP72	99	78.109	Panthera_tigris_altaica
ENSSDUG00000007345	srp72	97	57.382	ENSPTRG00000048100	-	95	56.947	Pan_troglodytes
ENSSDUG00000007345	srp72	79	62.127	ENSPTRG00000043609	-	91	61.993	Pan_troglodytes
ENSSDUG00000007345	srp72	96	77.523	ENSPTRG00000048466	-	99	76.866	Pan_troglodytes
ENSSDUG00000007345	srp72	93	62.342	ENSPANG00000030230	-	98	61.551	Papio_anubis
ENSSDUG00000007345	srp72	96	77.370	ENSPANG00000005495	SRP72	99	76.716	Papio_anubis
ENSSDUG00000007345	srp72	92	77.476	ENSPSIG00000003003	SRP72	100	77.570	Pelodiscus_sinensis
ENSSDUG00000007345	srp72	97	77.273	ENSPEMG00000012828	-	99	78.086	Peromyscus_maniculatus_bairdii
ENSSDUG00000007345	srp72	95	77.280	ENSPCIG00000000732	SRP72	99	76.418	Phascolarctos_cinereus
ENSSDUG00000007345	srp72	98	92.676	ENSPFOG00000003480	srp72	100	91.629	Poecilia_formosa
ENSSDUG00000007345	srp72	98	92.676	ENSPLAG00000020122	srp72	100	91.629	Poecilia_latipinna
ENSSDUG00000007345	srp72	98	92.526	ENSPMEG00000019988	srp72	100	91.480	Poecilia_mexicana
ENSSDUG00000007345	srp72	98	92.526	ENSPREG00000006218	srp72	100	91.330	Poecilia_reticulata
ENSSDUG00000007345	srp72	97	76.727	ENSPPYG00000014752	-	79	76.100	Pongo_abelii
ENSSDUG00000007345	srp72	56	65.013	ENSPPYG00000009152	-	97	64.010	Pongo_abelii
ENSSDUG00000007345	srp72	96	76.147	ENSPVAG00000005590	SRP72	99	75.522	Pteropus_vampyrus
ENSSDUG00000007345	srp72	98	94.461	ENSPNYG00000001916	srp72	100	94.461	Pundamilia_nyererei
ENSSDUG00000007345	srp72	99	86.119	ENSPNAG00000022424	srp72	100	85.800	Pygocentrus_nattereri
ENSSDUG00000007345	srp72	99	75.373	ENSRNOG00000002100	LOC108348180	99	75.373	Rattus_norvegicus
ENSSDUG00000007345	srp72	97	60.301	ENSRBIG00000029328	-	98	60.377	Rhinopithecus_bieti
ENSSDUG00000007345	srp72	96	72.282	ENSRBIG00000042069	SRP72	99	71.749	Rhinopithecus_bieti
ENSSDUG00000007345	srp72	96	77.370	ENSRROG00000035704	SRP72	99	76.716	Rhinopithecus_roxellana
ENSSDUG00000007345	srp72	91	77.134	ENSSHAG00000000614	SRP72	99	73.848	Sarcophilus_harrisii
ENSSDUG00000007345	srp72	98	84.006	ENSSFOG00015002026	srp72	100	83.857	Scleropages_formosus
ENSSDUG00000007345	srp72	98	92.066	ENSSMAG00000007639	srp72	100	92.996	Scophthalmus_maximus
ENSSDUG00000007345	srp72	100	99.561	ENSSLDG00000021819	srp72	100	99.561	Seriola_lalandi_dorsalis
ENSSDUG00000007345	srp72	73	76.378	ENSSARG00000005804	SRP72	76	75.819	Sorex_araneus
ENSSDUG00000007345	srp72	95	77.916	ENSSPUG00000009740	SRP72	98	77.238	Sphenodon_punctatus
ENSSDUG00000007345	srp72	98	96.557	ENSSPAG00000011565	srp72	100	96.557	Stegastes_partitus
ENSSDUG00000007345	srp72	98	74.849	ENSSSCG00000008900	SRP72	99	73.952	Sus_scrofa
ENSSDUG00000007345	srp72	95	78.140	ENSTGUG00000004767	SRP72	100	76.706	Taeniopygia_guttata
ENSSDUG00000007345	srp72	96	89.538	ENSTRUG00000009831	srp72	100	89.371	Takifugu_rubripes
ENSSDUG00000007345	srp72	98	91.416	ENSTNIG00000013073	srp72	100	91.369	Tetraodon_nigroviridis
ENSSDUG00000007345	srp72	87	67.241	ENSTBEG00000007394	SRP72	90	67.241	Tupaia_belangeri
ENSSDUG00000007345	srp72	91	76.737	ENSTTRG00000010945	SRP72	100	76.063	Tursiops_truncatus
ENSSDUG00000007345	srp72	57	79.221	ENSUAMG00000001701	SRP72	100	77.690	Ursus_americanus
ENSSDUG00000007345	srp72	95	77.795	ENSUMAG00000008151	SRP72	99	77.015	Ursus_maritimus
ENSSDUG00000007345	srp72	96	75.994	ENSVPAG00000000458	SRP72	99	75.373	Vicugna_pacos
ENSSDUG00000007345	srp72	96	77.676	ENSVVUG00000006020	SRP72	99	77.015	Vulpes_vulpes
ENSSDUG00000007345	srp72	94	74.725	ENSXETG00000010205	srp72	100	74.411	Xenopus_tropicalis
ENSSDUG00000007345	srp72	99	92.101	ENSXMAG00000018000	srp72	99	91.168	Xiphophorus_maculatus