EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000007383 (Gene tree)
Gene ID: 111231183
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 16676 bases
Position: chrBDQW01000291.1:908324-924999
Accession: 111231183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000010258	KH_1	PF00013.29	1.9e-68	1	4
ENSSDUP00000010258	KH_1	PF00013.29	1.9e-68	2	4
ENSSDUP00000010258	KH_1	PF00013.29	1.9e-68	3	4
ENSSDUP00000010258	KH_1	PF00013.29	1.9e-68	4	4
ENSSDUP00000010216	KH_1	PF00013.29	2.2e-68	1	4
ENSSDUP00000010216	KH_1	PF00013.29	2.2e-68	2	4
ENSSDUP00000010216	KH_1	PF00013.29	2.2e-68	3	4
ENSSDUP00000010216	KH_1	PF00013.29	2.2e-68	4	4
ENSSDUP00000010364	KH_1	PF00013.29	2.4e-68	1	4
ENSSDUP00000010364	KH_1	PF00013.29	2.4e-68	2	4
ENSSDUP00000010364	KH_1	PF00013.29	2.4e-68	3	4
ENSSDUP00000010364	KH_1	PF00013.29	2.4e-68	4	4
ENSSDUP00000010299	KH_1	PF00013.29	2.6e-68	1	4
ENSSDUP00000010299	KH_1	PF00013.29	2.6e-68	2	4
ENSSDUP00000010299	KH_1	PF00013.29	2.6e-68	3	4
ENSSDUP00000010299	KH_1	PF00013.29	2.6e-68	4	4
ENSSDUP00000010172	KH_1	PF00013.29	2.7e-68	1	4
ENSSDUP00000010172	KH_1	PF00013.29	2.7e-68	2	4
ENSSDUP00000010172	KH_1	PF00013.29	2.7e-68	3	4
ENSSDUP00000010172	KH_1	PF00013.29	2.7e-68	4	4
ENSSDUP00000010351	KH_1	PF00013.29	1.1e-54	1	3
ENSSDUP00000010351	KH_1	PF00013.29	1.1e-54	2	3
ENSSDUP00000010351	KH_1	PF00013.29	1.1e-54	3	3
ENSSDUP00000010258	KH_2	PF07650.17	2e-20	1	2
ENSSDUP00000010258	KH_2	PF07650.17	2e-20	2	2
ENSSDUP00000010364	KH_2	PF07650.17	2.1e-20	1	2
ENSSDUP00000010364	KH_2	PF07650.17	2.1e-20	2	2
ENSSDUP00000010216	KH_2	PF07650.17	2.3e-20	1	2
ENSSDUP00000010216	KH_2	PF07650.17	2.3e-20	2	2
ENSSDUP00000010299	KH_2	PF07650.17	2.3e-20	1	2
ENSSDUP00000010299	KH_2	PF07650.17	2.3e-20	2	2
ENSSDUP00000010172	KH_2	PF07650.17	2.7e-20	1	2
ENSSDUP00000010172	KH_2	PF07650.17	2.7e-20	2	2
ENSSDUP00000010351	KH_2	PF07650.17	2.2e-16	1	2
ENSSDUP00000010351	KH_2	PF07650.17	2.2e-16	2	2
ENSSDUP00000010258	DUF1897	PF09005.10	1.5e-14	1	2
ENSSDUP00000010258	DUF1897	PF09005.10	1.5e-14	2	2
ENSSDUP00000010299	DUF1897	PF09005.10	1.7e-13	1	2
ENSSDUP00000010299	DUF1897	PF09005.10	1.7e-13	2	2
ENSSDUP00000010172	DUF1897	PF09005.10	1.9e-13	1	2
ENSSDUP00000010172	DUF1897	PF09005.10	1.9e-13	2	2
ENSSDUP00000010351	DUF1897	PF09005.10	3.5e-11	1	2
ENSSDUP00000010351	DUF1897	PF09005.10	3.5e-11	2	2
ENSSDUP00000010216	DUF1897	PF09005.10	7e-08	1	1
ENSSDUP00000010364	DUF1897	PF09005.10	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000010365	-	6950	-	ENSSDUP00000010172	700 (aa)	-	-
ENSSDUT00000010409	-	6875	-	ENSSDUP00000010216	675 (aa)	-	-
ENSSDUT00000010545	-	1833	-	ENSSDUP00000010351	610 (aa)	-	-
ENSSDUT00000010451	-	6824	-	ENSSDUP00000010258	658 (aa)	-	-
ENSSDUT00000010492	-	3807	XM_022758211	ENSSDUP00000010299	680 (aa)	XP_022613932	-
ENSSDUT00000010558	-	2195	-	ENSSDUP00000010364	668 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000007383's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007383's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000007383	fubp1	97	50.602	ENSSDUG00000002390	khsrp	99	52.162
ENSSDUG00000007383	fubp1	55	38.272	ENSSDUG00000018636	PCBP2	72	38.272
ENSSDUG00000007383	fubp1	53	38.356	ENSSDUG00000017719	pcbp4	71	38.356
ENSSDUG00000007383	fubp1	95	51.767	ENSSDUG00000002110	KHSRP	97	53.353
ENSSDUG00000007383	fubp1	54	32.927	ENSSDUG00000005535	igf2bp3	66	31.515
ENSSDUG00000007383	fubp1	96	49.077	ENSSDUG00000005975	-	98	50.405
ENSSDUG00000007383	fubp1	58	30.409	ENSSDUG00000023380	igf2bp1	61	30.409
ENSSDUG00000007383	fubp1	52	36.364	ENSSDUG00000020704	nova1	51	36.364
ENSSDUG00000007383	fubp1	97	46.313	ENSSDUG00000023495	fubp3	98	48.316
ENSSDUG00000007383	fubp1	64	39.506	ENSSDUG00000021325	pcbp2	96	39.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007383	fubp1	68	76.509	ENSG00000162613	FUBP1	99	69.774	Homo_sapiens
ENSSDUG00000007383	fubp1	93	96.057	ENSAPOG00000014845	fubp1	99	90.520	Acanthochromis_polyacanthus
ENSSDUG00000007383	fubp1	68	75.052	ENSAMEG00000007372	FUBP1	99	69.129	Ailuropoda_melanoleuca
ENSSDUG00000007383	fubp1	100	88.801	ENSACIG00000020024	fubp1	100	89.474	Amphilophus_citrinellus
ENSSDUG00000007383	fubp1	95	91.745	ENSAPEG00000012232	fubp1	99	91.745	Amphiprion_percula
ENSSDUG00000007383	fubp1	98	96.992	ENSATEG00000018619	fubp1	100	96.992	Anabas_testudineus
ENSSDUG00000007383	fubp1	64	78.302	ENSAPLG00000005965	FUBP1	100	70.806	Anas_platyrhynchos
ENSSDUG00000007383	fubp1	68	75.687	ENSACAG00000006310	FUBP1	99	69.480	Anolis_carolinensis
ENSSDUG00000007383	fubp1	98	96.350	ENSACLG00000006708	fubp1	100	96.350	Astatotilapia_calliptera
ENSSDUG00000007383	fubp1	84	85.586	ENSAMXG00000005525	fubp1	100	84.515	Astyanax_mexicanus
ENSSDUG00000007383	fubp1	68	76.724	ENSCJAG00000007062	FUBP1	99	70.152	Callithrix_jacchus
ENSSDUG00000007383	fubp1	68	76.333	ENSCAFG00000020361	FUBP1	99	69.925	Canis_familiaris
ENSSDUG00000007383	fubp1	64	77.622	ENSTSYG00000000148	FUBP1	99	70.240	Carlito_syrichta
ENSSDUG00000007383	fubp1	53	84.274	ENSCAPG00000011052	-	65	84.274	Cavia_aperea
ENSSDUG00000007383	fubp1	68	76.333	ENSCPOG00000002757	FUBP1	100	69.281	Cavia_porcellus
ENSSDUG00000007383	fubp1	89	62.050	ENSCCAG00000036537	FUBP1	100	62.604	Cebus_capucinus
ENSSDUG00000007383	fubp1	68	76.119	ENSCATG00000042126	FUBP1	100	68.909	Cercocebus_atys
ENSSDUG00000007383	fubp1	68	76.333	ENSCLAG00000005621	FUBP1	100	72.152	Chinchilla_lanigera
ENSSDUG00000007383	fubp1	68	76.119	ENSCSAG00000001402	FUBP1	99	69.774	Chlorocebus_sabaeus
ENSSDUG00000007383	fubp1	68	76.119	ENSCHOG00000008177	FUBP1	98	70.075	Choloepus_hoffmanni
ENSSDUG00000007383	fubp1	68	77.996	ENSCGRG00001007103	Fubp1	99	70.287	Cricetulus_griseus_chok1gshd
ENSSDUG00000007383	fubp1	64	77.855	ENSCGRG00000003372	Fubp1	99	70.064	Cricetulus_griseus_crigri
ENSSDUG00000007383	fubp1	97	93.262	ENSCSEG00000021412	fubp1	99	92.649	Cynoglossus_semilaevis
ENSSDUG00000007383	fubp1	98	93.967	ENSCVAG00000014487	fubp1	99	93.967	Cyprinodon_variegatus
ENSSDUG00000007383	fubp1	98	82.749	ENSDARG00000029248	fubp1	100	82.456	Danio_rerio
ENSSDUG00000007383	fubp1	82	57.143	ENSDNOG00000034565	-	84	52.525	Dasypus_novemcinctus
ENSSDUG00000007383	fubp1	68	76.333	ENSDORG00000016534	Fubp1	98	69.925	Dipodomys_ordii
ENSSDUG00000007383	fubp1	73	75.921	ENSETEG00000000948	-	58	76.204	Echinops_telfairi
ENSSDUG00000007383	fubp1	64	70.909	ENSEBUG00000016143	fubp1	64	67.797	Eptatretus_burgeri
ENSSDUG00000007383	fubp1	67	82.432	ENSEEUG00000001287	FUBP1	87	71.516	Erinaceus_europaeus
ENSSDUG00000007383	fubp1	98	84.320	ENSELUG00000007990	fubp1	100	84.911	Esox_lucius
ENSSDUG00000007383	fubp1	68	77.273	ENSFALG00000005768	FUBP1	100	71.111	Ficedula_albicollis
ENSSDUG00000007383	fubp1	68	76.119	ENSFDAG00000014210	FUBP1	100	70.270	Fukomys_damarensis
ENSSDUG00000007383	fubp1	98	94.586	ENSFHEG00000005230	fubp1	100	94.586	Fundulus_heteroclitus
ENSSDUG00000007383	fubp1	100	81.162	ENSGMOG00000003370	fubp1	99	83.385	Gadus_morhua
ENSSDUG00000007383	fubp1	68	77.754	ENSGALG00000008939	FUBP1	99	71.472	Gallus_gallus
ENSSDUG00000007383	fubp1	98	96.391	ENSGAFG00000020972	fubp1	100	96.391	Gambusia_affinis
ENSSDUG00000007383	fubp1	98	89.568	ENSGACG00000016563	fubp1	99	90.586	Gasterosteus_aculeatus
ENSSDUG00000007383	fubp1	98	96.496	ENSHBUG00000009835	fubp1	100	96.496	Haplochromis_burtoni
ENSSDUG00000007383	fubp1	69	72.340	ENSHGLG00000002808	-	99	64.157	Heterocephalus_glaber_female
ENSSDUG00000007383	fubp1	68	76.333	ENSHGLG00000008415	-	100	72.152	Heterocephalus_glaber_female
ENSSDUG00000007383	fubp1	68	76.333	ENSHGLG00100003417	-	100	68.596	Heterocephalus_glaber_male
ENSSDUG00000007383	fubp1	69	72.979	ENSHGLG00100001414	-	99	64.759	Heterocephalus_glaber_male
ENSSDUG00000007383	fubp1	98	95.672	ENSHCOG00000000910	fubp1	100	95.672	Hippocampus_comes
ENSSDUG00000007383	fubp1	98	82.116	ENSIPUG00000009896	fubp1	100	83.159	Ictalurus_punctatus
ENSSDUG00000007383	fubp1	68	76.856	ENSSTOG00000014312	FUBP1	100	70.045	Ictidomys_tridecemlineatus
ENSSDUG00000007383	fubp1	68	76.906	ENSJJAG00000020069	Fubp1	100	70.270	Jaculus_jaculus
ENSSDUG00000007383	fubp1	98	94.012	ENSKMAG00000018897	fubp1	100	92.515	Kryptolebias_marmoratus
ENSSDUG00000007383	fubp1	99	95.044	ENSLBEG00000012700	fubp1	99	95.044	Labrus_bergylta
ENSSDUG00000007383	fubp1	96	81.409	ENSLOCG00000003745	fubp1	99	80.617	Lepisosteus_oculatus
ENSSDUG00000007383	fubp1	68	75.681	ENSLAFG00000003273	FUBP1	99	71.993	Loxodonta_africana
ENSSDUG00000007383	fubp1	68	76.509	ENSMFAG00000031825	FUBP1	99	70.000	Macaca_fascicularis
ENSSDUG00000007383	fubp1	68	76.638	ENSMMUG00000002899	FUBP1	100	69.083	Macaca_mulatta
ENSSDUG00000007383	fubp1	68	76.119	ENSMNEG00000045212	FUBP1	100	68.909	Macaca_nemestrina
ENSSDUG00000007383	fubp1	98	98.190	ENSMAMG00000007489	fubp1	99	98.190	Mastacembelus_armatus
ENSSDUG00000007383	fubp1	98	96.241	ENSMZEG00005024298	fubp1	100	96.241	Maylandia_zebra
ENSSDUG00000007383	fubp1	64	78.353	ENSMGAG00000009424	FUBP1	100	70.031	Meleagris_gallopavo
ENSSDUG00000007383	fubp1	68	76.546	ENSMAUG00000016428	Fubp1	98	70.946	Mesocricetus_auratus
ENSSDUG00000007383	fubp1	68	76.989	ENSMOCG00000014751	Fubp1	99	70.183	Microtus_ochrogaster
ENSSDUG00000007383	fubp1	84	91.930	ENSMMOG00000019463	fubp1	99	92.870	Mola_mola
ENSSDUG00000007383	fubp1	66	70.460	ENSMODG00000020804	FUBP1	100	65.084	Monodelphis_domestica
ENSSDUG00000007383	fubp1	98	96.391	ENSMALG00000015173	fubp1	100	96.391	Monopterus_albus
ENSSDUG00000007383	fubp1	68	77.391	MGP_CAROLIEiJ_G0025740	Fubp1	99	74.484	Mus_caroli
ENSSDUG00000007383	fubp1	68	77.174	ENSMUSG00000028034	Fubp1	99	74.296	Mus_musculus
ENSSDUG00000007383	fubp1	68	77.223	MGP_PahariEiJ_G0027191	Fubp1	99	74.345	Mus_pahari
ENSSDUG00000007383	fubp1	68	77.391	MGP_SPRETEiJ_G0026693	Fubp1	99	74.484	Mus_spretus
ENSSDUG00000007383	fubp1	68	74.896	ENSMLUG00000014802	FUBP1	99	68.971	Myotis_lucifugus
ENSSDUG00000007383	fubp1	68	73.707	ENSNGAG00000014302	Fubp1	100	68.627	Nannospalax_galili
ENSSDUG00000007383	fubp1	95	91.536	ENSNBRG00000015099	fubp1	99	91.536	Neolamprologus_brichardi
ENSSDUG00000007383	fubp1	68	71.674	ENSNLEG00000009772	FUBP1	100	67.656	Nomascus_leucogenys
ENSSDUG00000007383	fubp1	54	83.824	ENSMEUG00000007917	-	59	83.824	Notamacropus_eugenii
ENSSDUG00000007383	fubp1	66	88.679	ENSOPRG00000001175	FUBP1	98	59.276	Ochotona_princeps
ENSSDUG00000007383	fubp1	99	49.920	ENSODEG00000003657	-	100	50.543	Octodon_degus
ENSSDUG00000007383	fubp1	68	76.333	ENSODEG00000002600	-	100	70.270	Octodon_degus
ENSSDUG00000007383	fubp1	98	96.496	ENSONIG00000018381	fubp1	100	96.496	Oreochromis_niloticus
ENSSDUG00000007383	fubp1	57	79.949	ENSOANG00000009777	FUBP1	100	70.560	Ornithorhynchus_anatinus
ENSSDUG00000007383	fubp1	95	87.832	ENSORLG00000003540	fubp1	99	88.144	Oryzias_latipes
ENSSDUG00000007383	fubp1	99	91.471	ENSORLG00020005908	fubp1	97	91.176	Oryzias_latipes_hni
ENSSDUG00000007383	fubp1	98	92.964	ENSORLG00015008779	fubp1	99	92.365	Oryzias_latipes_hsok
ENSSDUG00000007383	fubp1	99	91.016	ENSOMEG00000021943	fubp1	99	91.016	Oryzias_melastigma
ENSSDUG00000007383	fubp1	68	74.741	ENSOGAG00000014233	FUBP1	99	68.869	Otolemur_garnettii
ENSSDUG00000007383	fubp1	67	76.724	ENSOARG00000013259	FUBP1	100	71.449	Ovis_aries
ENSSDUG00000007383	fubp1	68	76.333	ENSPPRG00000000413	FUBP1	99	69.925	Panthera_pardus
ENSSDUG00000007383	fubp1	68	76.333	ENSPTIG00000019450	FUBP1	99	69.925	Panthera_tigris_altaica
ENSSDUG00000007383	fubp1	65	77.262	ENSPSIG00000012965	FUBP1	100	69.632	Pelodiscus_sinensis
ENSSDUG00000007383	fubp1	95	81.748	ENSPMGG00000009060	fubp1	99	81.135	Periophthalmus_magnuspinnatus
ENSSDUG00000007383	fubp1	68	77.371	ENSPEMG00000021802	Fubp1	100	70.270	Peromyscus_maniculatus_bairdii
ENSSDUG00000007383	fubp1	61	57.500	ENSPMAG00000001644	-	93	58.696	Petromyzon_marinus
ENSSDUG00000007383	fubp1	98	95.038	ENSPFOG00000000238	fubp1	100	95.038	Poecilia_formosa
ENSSDUG00000007383	fubp1	95	92.163	ENSPLAG00000021170	fubp1	100	92.180	Poecilia_latipinna
ENSSDUG00000007383	fubp1	91	95.567	ENSPMEG00000004747	fubp1	99	95.567	Poecilia_mexicana
ENSSDUG00000007383	fubp1	98	94.887	ENSPREG00000017911	fubp1	100	94.887	Poecilia_reticulata
ENSSDUG00000007383	fubp1	70	76.000	ENSPPYG00000001219	-	68	77.056	Pongo_abelii
ENSSDUG00000007383	fubp1	68	76.282	ENSPCAG00000012617	FUBP1	98	69.880	Procavia_capensis
ENSSDUG00000007383	fubp1	90	74.569	ENSPCOG00000024974	FUBP1	99	69.925	Propithecus_coquereli
ENSSDUG00000007383	fubp1	91	64.085	ENSPVAG00000014637	FUBP1	98	65.714	Pteropus_vampyrus
ENSSDUG00000007383	fubp1	98	96.241	ENSPNYG00000004552	fubp1	100	96.241	Pundamilia_nyererei
ENSSDUG00000007383	fubp1	98	85.587	ENSPNAG00000016207	fubp1	100	85.736	Pygocentrus_nattereri
ENSSDUG00000007383	fubp1	68	77.391	ENSRNOG00000043370	Fubp1	100	69.501	Rattus_norvegicus
ENSSDUG00000007383	fubp1	68	76.119	ENSRBIG00000042950	FUBP1	100	68.843	Rhinopithecus_bieti
ENSSDUG00000007383	fubp1	68	76.119	ENSRROG00000043534	FUBP1	100	68.843	Rhinopithecus_roxellana
ENSSDUG00000007383	fubp1	68	76.333	ENSSBOG00000027299	FUBP1	97	72.761	Saimiri_boliviensis_boliviensis
ENSSDUG00000007383	fubp1	64	76.674	ENSSHAG00000005367	FUBP1	98	72.678	Sarcophilus_harrisii
ENSSDUG00000007383	fubp1	97	83.258	ENSSFOG00015010213	fubp1	99	83.107	Scleropages_formosus
ENSSDUG00000007383	fubp1	100	89.828	ENSSMAG00000012029	fubp1	100	89.828	Scophthalmus_maximus
ENSSDUG00000007383	fubp1	100	100.000	ENSSLDG00000022863	fubp1	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000007383	fubp1	68	87.356	ENSSARG00000011730	FUBP1	56	88.372	Sorex_araneus
ENSSDUG00000007383	fubp1	98	67.737	ENSSPUG00000008389	FUBP1	100	68.162	Sphenodon_punctatus
ENSSDUG00000007383	fubp1	98	97.744	ENSSPAG00000010161	fubp1	100	97.744	Stegastes_partitus
ENSSDUG00000007383	fubp1	64	77.442	ENSTGUG00000006841	FUBP1	100	70.288	Taeniopygia_guttata
ENSSDUG00000007383	fubp1	98	88.389	ENSTRUG00000004615	fubp1	100	87.954	Takifugu_rubripes
ENSSDUG00000007383	fubp1	77	82.143	ENSTBEG00000017333	FUBP1	64	88.095	Tupaia_belangeri
ENSSDUG00000007383	fubp1	68	76.333	ENSTTRG00000000096	FUBP1	98	69.774	Tursiops_truncatus
ENSSDUG00000007383	fubp1	68	76.333	ENSVPAG00000004709	FUBP1	99	69.774	Vicugna_pacos
ENSSDUG00000007383	fubp1	100	81.043	ENSXCOG00000019354	fubp1	99	81.677	Xiphophorus_couchianus
ENSSDUG00000007383	fubp1	91	95.238	ENSXMAG00000007168	fubp1	99	95.238	Xiphophorus_maculatus