EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000007387 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 6908 bases
Position: chrBDQW01000273.1:509671-516578
Accession: 111230501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000010079	RRM_1	PF00076.22	4.8e-31	1	2
ENSSDUP00000010079	RRM_1	PF00076.22	4.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000010271	-	978	XM_022757254	ENSSDUP00000010079	325 (aa)	XP_022612975	-

Gene Model

Click here to download ENSSDUG00000007387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000007387	srsf4	54	74.468	ENSSDUG00000016097	srsf6a	53	74.595
ENSSDUG00000007387	srsf4	52	65.193	ENSSDUG00000005766	srsf5b	63	65.556
ENSSDUG00000007387	srsf4	50	41.176	ENSSDUG00000003929	-	69	41.420
ENSSDUG00000007387	srsf4	70	54.202	ENSSDUG00000006103	srsf5a	62	62.921
ENSSDUG00000007387	srsf4	53	41.176	ENSSDUG00000018908	srsf9	73	43.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007387	srsf4	80	68.939	ENSG00000116350	SRSF4	60	63.300	Homo_sapiens
ENSSDUG00000007387	srsf4	71	56.170	ENSAPOG00000023399	-	60	75.281	Acanthochromis_polyacanthus
ENSSDUG00000007387	srsf4	84	77.070	ENSAPOG00000020244	srsf4	86	77.070	Acanthochromis_polyacanthus
ENSSDUG00000007387	srsf4	81	75.601	ENSACIG00000018649	srsf4	90	96.639	Amphilophus_citrinellus
ENSSDUG00000007387	srsf4	91	79.605	ENSATEG00000005680	srsf4	81	77.419	Anabas_testudineus
ENSSDUG00000007387	srsf4	54	76.923	ENSACLG00000021269	-	97	58.286	Astatotilapia_calliptera
ENSSDUG00000007387	srsf4	81	76.190	ENSACLG00000003395	srsf4	77	95.588	Astatotilapia_calliptera
ENSSDUG00000007387	srsf4	54	92.135	ENSAMXG00000034811	srsf4	70	91.549	Astyanax_mexicanus
ENSSDUG00000007387	srsf4	53	50.754	WBGene00004698	rsp-1	97	50.694	Caenorhabditis_elegans
ENSSDUG00000007387	srsf4	54	87.640	ENSCHIG00000022096	SRSF4	57	66.914	Capra_hircus
ENSSDUG00000007387	srsf4	54	87.640	ENSTSYG00000007903	SRSF4	55	68.727	Carlito_syrichta
ENSSDUG00000007387	srsf4	53	72.989	ENSCAPG00000014747	SRSF4	54	58.303	Cavia_aperea
ENSSDUG00000007387	srsf4	54	87.640	ENSCATG00000031440	SRSF4	60	63.300	Cercocebus_atys
ENSSDUG00000007387	srsf4	54	87.571	ENSCSAG00000001022	SRSF4	56	68.727	Chlorocebus_sabaeus
ENSSDUG00000007387	srsf4	53	61.616	ENSCING00000012370	-	68	57.692	Ciona_intestinalis
ENSSDUG00000007387	srsf4	52	55.729	ENSCING00000024718	-	56	55.959	Ciona_intestinalis
ENSSDUG00000007387	srsf4	54	59.184	ENSCING00000020631	-	80	57.949	Ciona_intestinalis
ENSSDUG00000007387	srsf4	52	60.109	ENSCING00000011362	-	65	58.378	Ciona_intestinalis
ENSSDUG00000007387	srsf4	53	66.102	ENSCSAVG00000002581	-	70	62.983	Ciona_savignyi
ENSSDUG00000007387	srsf4	54	87.571	ENSCANG00000028667	SRSF4	56	68.727	Colobus_angolensis_palliatus
ENSSDUG00000007387	srsf4	84	75.796	ENSCSEG00000010058	srsf4	75	95.041	Cynoglossus_semilaevis
ENSSDUG00000007387	srsf4	77	50.215	ENSCVAG00000004342	srsf4	79	53.712	Cyprinodon_variegatus
ENSSDUG00000007387	srsf4	70	51.020	FBgn0004587	B52	95	57.031	Drosophila_melanogaster
ENSSDUG00000007387	srsf4	53	62.011	ENSEBUG00000001681	srsf4	67	60.894	Eptatretus_burgeri
ENSSDUG00000007387	srsf4	97	62.757	ENSELUG00000017551	srsf4	93	73.846	Esox_lucius
ENSSDUG00000007387	srsf4	54	87.571	ENSFCAG00000027821	SRSF4	66	59.317	Felis_catus
ENSSDUG00000007387	srsf4	54	87.640	ENSFALG00000001346	SRSF4	70	56.627	Ficedula_albicollis
ENSSDUG00000007387	srsf4	86	74.098	ENSFHEG00000007472	srsf4	90	98.810	Fundulus_heteroclitus
ENSSDUG00000007387	srsf4	54	90.449	ENSGMOG00000012906	srsf4	57	88.827	Gadus_morhua
ENSSDUG00000007387	srsf4	54	87.640	ENSGALG00000050314	SRSF4	61	58.419	Gallus_gallus
ENSSDUG00000007387	srsf4	70	94.203	ENSGAFG00000018496	srsf4	87	71.617	Gambusia_affinis
ENSSDUG00000007387	srsf4	54	95.531	ENSGACG00000002389	srsf4	56	94.413	Gasterosteus_aculeatus
ENSSDUG00000007387	srsf4	54	87.571	ENSGGOG00000002444	SRSF4	60	63.636	Gorilla_gorilla
ENSSDUG00000007387	srsf4	54	76.923	ENSHBUG00000011326	-	89	56.782	Haplochromis_burtoni
ENSSDUG00000007387	srsf4	67	98.485	ENSHCOG00000012540	srsf4	78	98.485	Hippocampus_comes
ENSSDUG00000007387	srsf4	54	87.640	ENSSTOG00000015908	SRSF4	60	63.880	Ictidomys_tridecemlineatus
ENSSDUG00000007387	srsf4	81	74.306	ENSKMAG00000013631	srsf4	82	78.365	Kryptolebias_marmoratus
ENSSDUG00000007387	srsf4	53	75.138	ENSLOCG00000001442	-	75	59.928	Lepisosteus_oculatus
ENSSDUG00000007387	srsf4	54	87.571	ENSMFAG00000041784	SRSF4	56	68.727	Macaca_fascicularis
ENSSDUG00000007387	srsf4	54	87.571	ENSMNEG00000034931	SRSF4	56	68.727	Macaca_nemestrina
ENSSDUG00000007387	srsf4	54	87.571	ENSMLEG00000031619	SRSF4	56	68.727	Mandrillus_leucophaeus
ENSSDUG00000007387	srsf4	92	82.831	ENSMAMG00000004888	srsf4	90	95.588	Mastacembelus_armatus
ENSSDUG00000007387	srsf4	81	76.190	ENSMZEG00005026275	srsf4	82	77.816	Maylandia_zebra
ENSSDUG00000007387	srsf4	54	87.640	ENSMICG00000043567	SRSF4	59	64.966	Microcebus_murinus
ENSSDUG00000007387	srsf4	81	80.000	ENSMMOG00000013653	srsf4	77	95.588	Mola_mola
ENSSDUG00000007387	srsf4	54	88.136	ENSMODG00000011052	SRSF4	56	83.799	Monodelphis_domestica
ENSSDUG00000007387	srsf4	94	74.785	ENSMALG00000013392	srsf4	98	77.193	Monopterus_albus
ENSSDUG00000007387	srsf4	54	87.640	MGP_PahariEiJ_G0028887	Srsf4	62	63.787	Mus_pahari
ENSSDUG00000007387	srsf4	54	87.640	ENSNGAG00000012225	Srsf4	50	72.996	Nannospalax_galili
ENSSDUG00000007387	srsf4	54	87.571	ENSNLEG00000009916	SRSF4	56	68.727	Nomascus_leucogenys
ENSSDUG00000007387	srsf4	70	56.134	ENSNLEG00000030787	-	62	70.056	Nomascus_leucogenys
ENSSDUG00000007387	srsf4	54	92.737	ENSONIG00000013730	srsf4	67	93.889	Oreochromis_niloticus
ENSSDUG00000007387	srsf4	61	73.134	ENSORLG00000009430	-	70	76.836	Oryzias_latipes
ENSSDUG00000007387	srsf4	64	94.203	ENSORLG00015007566	srsf4	85	95.588	Oryzias_latipes_hsok
ENSSDUG00000007387	srsf4	81	71.331	ENSOMEG00000005541	srsf4	84	77.133	Oryzias_melastigma
ENSSDUG00000007387	srsf4	54	87.571	ENSPPAG00000028357	SRSF4	60	63.636	Pan_paniscus
ENSSDUG00000007387	srsf4	54	87.571	ENSPPRG00000016248	SRSF4	66	59.317	Panthera_pardus
ENSSDUG00000007387	srsf4	54	87.571	ENSPTRG00000000445	SRSF4	60	63.636	Pan_troglodytes
ENSSDUG00000007387	srsf4	54	87.571	ENSPANG00000021937	SRSF4	56	68.727	Papio_anubis
ENSSDUG00000007387	srsf4	83	74.296	ENSPMGG00000013436	srsf4	95	89.764	Periophthalmus_magnuspinnatus
ENSSDUG00000007387	srsf4	53	65.193	ENSPMAG00000009397	srsf4	68	64.286	Petromyzon_marinus
ENSSDUG00000007387	srsf4	66	98.507	ENSPLAG00000008812	srsf4	81	95.652	Poecilia_latipinna
ENSSDUG00000007387	srsf4	79	98.507	ENSPMEG00000023638	srsf4	98	95.652	Poecilia_mexicana
ENSSDUG00000007387	srsf4	72	98.507	ENSPREG00000009639	srsf4	98	95.652	Poecilia_reticulata
ENSSDUG00000007387	srsf4	81	78.358	ENSPNYG00000003796	srsf4	80	80.224	Pundamilia_nyererei
ENSSDUG00000007387	srsf4	91	69.536	ENSPNAG00000023844	srsf4	54	90.000	Pygocentrus_nattereri
ENSSDUG00000007387	srsf4	54	87.571	ENSRBIG00000035789	SRSF4	56	68.727	Rhinopithecus_bieti
ENSSDUG00000007387	srsf4	54	87.571	ENSRROG00000029463	SRSF4	56	68.727	Rhinopithecus_roxellana
ENSSDUG00000007387	srsf4	95	62.460	ENSSFOG00015020292	srsf4	82	90.991	Scleropages_formosus
ENSSDUG00000007387	srsf4	84	73.926	ENSSMAG00000001707	srsf4	84	72.293	Scophthalmus_maximus
ENSSDUG00000007387	srsf4	54	81.356	ENSSLDG00000009745	srsf4	80	67.636	Seriola_lalandi_dorsalis
ENSSDUG00000007387	srsf4	86	77.744	ENSSPAG00000014538	srsf4	83	97.458	Stegastes_partitus
ENSSDUG00000007387	srsf4	86	75.338	ENSTRUG00000011891	srsf4	86	73.968	Takifugu_rubripes
ENSSDUG00000007387	srsf4	54	96.067	ENSTNIG00000005573	srsf4	71	77.391	Tetraodon_nigroviridis
ENSSDUG00000007387	srsf4	54	87.640	ENSUAMG00000006106	SRSF4	65	61.300	Ursus_americanus
ENSSDUG00000007387	srsf4	54	67.816	ENSXCOG00000003212	-	71	61.475	Xiphophorus_couchianus
ENSSDUG00000007387	srsf4	99	68.347	ENSXCOG00000018826	srsf4	95	86.260	Xiphophorus_couchianus
ENSSDUG00000007387	srsf4	71	66.667	ENSXMAG00000005545	srsf4	65	74.011	Xiphophorus_maculatus