EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000007408 (Gene tree)
Gene ID: -
Gene Symbol: ppargc1a
Alias: PGC1|gb:dq017637|ppargc1al
Full Name: PPARG coactivator 1 alpha
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 35279 bases
Position: chrBDQW01000309.1:1048759-1084037
Accession: 111231592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000010144	RRM_1	PF00076.22	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000010335	-	2316	XM_022758732	ENSSDUP00000010144	771 (aa)	XP_022614453	-

Gene Model

Click here to download ENSSDUG00000007408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007408's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007408	ppargc1a	100	55.054	ENSG00000109819	PPARGC1A	96	69.863	Homo_sapiens
ENSSDUG00000007408	ppargc1a	97	99.567	ENSAPOG00000018632	ppargc1a	100	87.060	Acanthochromis_polyacanthus
ENSSDUG00000007408	ppargc1a	100	78.234	ENSACIG00000009732	ppargc1a	100	79.478	Amphilophus_citrinellus
ENSSDUG00000007408	ppargc1a	97	99.567	ENSAOCG00000006754	ppargc1a	100	87.985	Amphiprion_ocellaris
ENSSDUG00000007408	ppargc1a	100	84.559	ENSAPEG00000022574	ppargc1a	100	85.294	Amphiprion_percula
ENSSDUG00000007408	ppargc1a	97	98.276	ENSATEG00000016702	ppargc1a	100	83.625	Anabas_testudineus
ENSSDUG00000007408	ppargc1a	100	80.100	ENSACLG00000001002	ppargc1a	85	98.157	Astatotilapia_calliptera
ENSSDUG00000007408	ppargc1a	98	68.878	ENSAMXG00000002461	ppargc1a	99	68.821	Astyanax_mexicanus
ENSSDUG00000007408	ppargc1a	70	47.368	ENSCAPG00000005150	PPARGC1A	64	47.464	Cavia_aperea
ENSSDUG00000007408	ppargc1a	73	53.162	ENSCPOG00000001518	PPARGC1A	68	53.242	Cavia_porcellus
ENSSDUG00000007408	ppargc1a	100	55.516	ENSCCAG00000024681	PPARGC1A	87	84.242	Cebus_capucinus
ENSSDUG00000007408	ppargc1a	100	54.654	ENSCLAG00000002058	PPARGC1A	68	53.253	Chinchilla_lanigera
ENSSDUG00000007408	ppargc1a	72	84.286	ENSCSEG00000006884	ppargc1a	86	98.707	Cynoglossus_semilaevis
ENSSDUG00000007408	ppargc1a	67	61.466	ENSCVAG00000016547	ppargc1a	71	62.916	Cyprinodon_variegatus
ENSSDUG00000007408	ppargc1a	93	90.058	ENSDARG00000067829	ppargc1a	89	91.515	Danio_rerio
ENSSDUG00000007408	ppargc1a	98	54.479	ENSECAG00000009164	PPARGC1A	65	53.162	Equus_caballus
ENSSDUG00000007408	ppargc1a	97	92.208	ENSELUG00000017027	ppargc1a	100	67.583	Esox_lucius
ENSSDUG00000007408	ppargc1a	97	96.970	ENSFHEG00000021990	ppargc1a	100	74.754	Fundulus_heteroclitus
ENSSDUG00000007408	ppargc1a	97	96.104	ENSGAFG00000015514	ppargc1a	100	80.175	Gambusia_affinis
ENSSDUG00000007408	ppargc1a	100	81.911	ENSHBUG00000005269	ppargc1a	100	81.841	Haplochromis_burtoni
ENSSDUG00000007408	ppargc1a	97	94.850	ENSHCOG00000014886	ppargc1a	100	69.346	Hippocampus_comes
ENSSDUG00000007408	ppargc1a	97	97.414	ENSKMAG00000005390	ppargc1a	100	79.203	Kryptolebias_marmoratus
ENSSDUG00000007408	ppargc1a	97	98.707	ENSLBEG00000019562	ppargc1a	88	98.707	Labrus_bergylta
ENSSDUG00000007408	ppargc1a	72	60.199	ENSLOCG00000012350	ppargc1a	69	59.806	Lepisosteus_oculatus
ENSSDUG00000007408	ppargc1a	73	45.113	ENSLOCG00000012195	ppargc1b	50	45.113	Lepisosteus_oculatus
ENSSDUG00000007408	ppargc1a	97	98.707	ENSMAMG00000005531	ppargc1a	91	98.707	Mastacembelus_armatus
ENSSDUG00000007408	ppargc1a	69	98.268	ENSMZEG00005001739	ppargc1a	67	98.268	Maylandia_zebra
ENSSDUG00000007408	ppargc1a	73	53.022	ENSMGAG00000012485	PPARGC1A	69	53.022	Meleagris_gallopavo
ENSSDUG00000007408	ppargc1a	97	97.009	ENSMMOG00000011847	ppargc1a	91	97.009	Mola_mola
ENSSDUG00000007408	ppargc1a	99	97.845	ENSMALG00000004625	ppargc1a	88	97.845	Monopterus_albus
ENSSDUG00000007408	ppargc1a	100	54.513	ENSMUSG00000029167	Ppargc1a	68	53.663	Mus_musculus
ENSSDUG00000007408	ppargc1a	100	54.459	MGP_SPRETEiJ_G0028208	Ppargc1a	68	53.754	Mus_spretus
ENSSDUG00000007408	ppargc1a	100	81.529	ENSNBRG00000023403	ppargc1a	100	81.101	Neolamprologus_brichardi
ENSSDUG00000007408	ppargc1a	72	77.491	ENSONIG00000007635	ppargc1a	100	75.000	Oreochromis_niloticus
ENSSDUG00000007408	ppargc1a	97	98.268	ENSORLG00000004788	ppargc1a	100	79.548	Oryzias_latipes
ENSSDUG00000007408	ppargc1a	97	98.268	ENSORLG00020014690	ppargc1a	100	79.115	Oryzias_latipes_hni
ENSSDUG00000007408	ppargc1a	100	78.616	ENSORLG00015012206	ppargc1a	100	79.474	Oryzias_latipes_hsok
ENSSDUG00000007408	ppargc1a	97	97.835	ENSOMEG00000000670	ppargc1a	100	79.302	Oryzias_melastigma
ENSSDUG00000007408	ppargc1a	57	54.962	ENSPPRG00000004608	PPARGC1B	50	54.962	Panthera_pardus
ENSSDUG00000007408	ppargc1a	56	54.962	ENSPTIG00000007391	PPARGC1B	50	54.962	Panthera_tigris_altaica
ENSSDUG00000007408	ppargc1a	69	70.711	ENSPKIG00000002531	ppargc1a	61	80.606	Paramormyrops_kingsleyae
ENSSDUG00000007408	ppargc1a	79	50.000	ENSPSIG00000008358	PPARGC1B	57	49.045	Pelodiscus_sinensis
ENSSDUG00000007408	ppargc1a	97	88.936	ENSPMGG00000019204	ppargc1a	100	71.672	Periophthalmus_magnuspinnatus
ENSSDUG00000007408	ppargc1a	100	55.279	ENSPEMG00000010892	Ppargc1a	68	54.003	Peromyscus_maniculatus_bairdii
ENSSDUG00000007408	ppargc1a	97	97.403	ENSPFOG00000001263	ppargc1a	100	70.677	Poecilia_formosa
ENSSDUG00000007408	ppargc1a	100	73.929	ENSPLAG00000002827	ppargc1a	100	74.691	Poecilia_latipinna
ENSSDUG00000007408	ppargc1a	97	96.970	ENSPMEG00000000720	ppargc1a	91	96.970	Poecilia_mexicana
ENSSDUG00000007408	ppargc1a	97	97.403	ENSPREG00000019171	ppargc1a	100	78.402	Poecilia_reticulata
ENSSDUG00000007408	ppargc1a	100	81.633	ENSPNYG00000006846	ppargc1a	100	80.952	Pundamilia_nyererei
ENSSDUG00000007408	ppargc1a	57	89.224	ENSPNAG00000010393	ppargc1a	69	69.686	Pygocentrus_nattereri
ENSSDUG00000007408	ppargc1a	97	98.707	ENSSMAG00000011571	ppargc1a	85	98.707	Scophthalmus_maximus
ENSSDUG00000007408	ppargc1a	100	80.837	ENSSLDG00000006987	ppargc1a	100	78.060	Seriola_lalandi_dorsalis
ENSSDUG00000007408	ppargc1a	90	80.800	ENSSARG00000000575	PPARGC1A	84	80.800	Sorex_araneus
ENSSDUG00000007408	ppargc1a	95	99.074	ENSSPAG00000023514	ppargc1a	100	86.073	Stegastes_partitus
ENSSDUG00000007408	ppargc1a	90	72.133	ENSTRUG00000007210	ppargc1a	92	72.325	Takifugu_rubripes
ENSSDUG00000007408	ppargc1a	73	43.761	ENSVPAG00000003478	PPARGC1A	68	43.590	Vicugna_pacos
ENSSDUG00000007408	ppargc1a	99	96.970	ENSXCOG00000004835	ppargc1a	100	72.429	Xiphophorus_couchianus
ENSSDUG00000007408	ppargc1a	97	96.537	ENSXMAG00000007748	ppargc1a	68	96.537	Xiphophorus_maculatus