EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000007444 (Gene tree)
Gene ID: 111225402
Gene Symbol: gpatch1
Alias: im:7135982|wu:fc11h11|wu:fj99h08
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 10314 bases
Position: chrBDQW01000012.1:1461954-1472267
Accession: 111225402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000010160	DUF1604	PF07713.13	4.2e-37	1	1
ENSSDUP00000010160	G-patch	PF01585.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000010354	-	3392	XM_022750246	ENSSDUP00000010160	980 (aa)	XP_022605967	UPI000BBE21D6

Gene Model

Click here to download ENSSDUG00000007444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007444's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007444	gpatch1	90	49.385	ENSG00000076650	GPATCH1	98	61.029	Homo_sapiens
ENSSDUG00000007444	gpatch1	90	49.723	ENSAMEG00000015575	GPATCH1	81	52.060	Ailuropoda_melanoleuca
ENSSDUG00000007444	gpatch1	100	70.641	ENSAOCG00000006668	gpatch1	100	70.612	Amphiprion_ocellaris
ENSSDUG00000007444	gpatch1	100	71.746	ENSAPEG00000000026	gpatch1	100	71.371	Amphiprion_percula
ENSSDUG00000007444	gpatch1	100	73.865	ENSATEG00000014494	gpatch1	100	74.573	Anabas_testudineus
ENSSDUG00000007444	gpatch1	90	46.825	ENSAPLG00000007584	GPATCH1	85	51.136	Anas_platyrhynchos
ENSSDUG00000007444	gpatch1	90	48.946	ENSANAG00000027002	GPATCH1	81	52.179	Aotus_nancymaae
ENSSDUG00000007444	gpatch1	89	81.010	ENSACLG00000024740	gpatch1	83	81.542	Astatotilapia_calliptera
ENSSDUG00000007444	gpatch1	92	56.204	ENSAMXG00000020177	gpatch1	86	59.390	Astyanax_mexicanus
ENSSDUG00000007444	gpatch1	90	50.000	ENSBTAG00000000721	GPATCH1	81	52.434	Bos_taurus
ENSSDUG00000007444	gpatch1	90	49.168	ENSCJAG00000000684	GPATCH1	81	52.428	Callithrix_jacchus
ENSSDUG00000007444	gpatch1	90	49.558	ENSCAFG00000007457	GPATCH1	68	52.375	Canis_familiaris
ENSSDUG00000007444	gpatch1	90	49.889	ENSCAFG00020019731	GPATCH1	81	52.375	Canis_lupus_dingo
ENSSDUG00000007444	gpatch1	80	54.353	ENSCHIG00000019626	GPATCH1	83	52.809	Capra_hircus
ENSSDUG00000007444	gpatch1	87	47.483	ENSCAPG00000008827	GPATCH1	81	50.648	Cavia_aperea
ENSSDUG00000007444	gpatch1	90	49.385	ENSCPOG00000024477	GPATCH1	81	52.201	Cavia_porcellus
ENSSDUG00000007444	gpatch1	90	48.835	ENSCCAG00000024676	GPATCH1	81	52.055	Cebus_capucinus
ENSSDUG00000007444	gpatch1	90	49.889	ENSCATG00000043637	GPATCH1	98	61.765	Cercocebus_atys
ENSSDUG00000007444	gpatch1	77	52.542	ENSCLAG00000003395	-	82	52.673	Chinchilla_lanigera
ENSSDUG00000007444	gpatch1	90	47.725	ENSCSAG00000004743	GPATCH1	81	50.934	Chlorocebus_sabaeus
ENSSDUG00000007444	gpatch1	77	59.641	ENSCHOG00000012865	GPATCH1	74	57.848	Choloepus_hoffmanni
ENSSDUG00000007444	gpatch1	77	53.876	ENSCPBG00000000666	GPATCH1	92	53.178	Chrysemys_picta_bellii
ENSSDUG00000007444	gpatch1	67	34.918	ENSCING00000012518	-	74	34.763	Ciona_intestinalis
ENSSDUG00000007444	gpatch1	79	50.114	ENSCANG00000012540	GPATCH1	78	53.629	Colobus_angolensis_palliatus
ENSSDUG00000007444	gpatch1	77	53.419	ENSCGRG00001016736	Gpatch1	80	52.964	Cricetulus_griseus_chok1gshd
ENSSDUG00000007444	gpatch1	77	46.124	ENSCGRG00000005069	Gpatch1	77	44.761	Cricetulus_griseus_crigri
ENSSDUG00000007444	gpatch1	81	63.871	ENSCSEG00000019456	-	88	73.451	Cynoglossus_semilaevis
ENSSDUG00000007444	gpatch1	89	57.563	ENSDARG00000033418	gpatch1	81	60.471	Danio_rerio
ENSSDUG00000007444	gpatch1	90	50.502	ENSDNOG00000005291	GPATCH1	84	53.224	Dasypus_novemcinctus
ENSSDUG00000007444	gpatch1	94	46.588	ENSDORG00000012546	Gpatch1	84	49.685	Dipodomys_ordii
ENSSDUG00000007444	gpatch1	70	54.810	ENSETEG00000003626	GPATCH1	71	54.639	Echinops_telfairi
ENSSDUG00000007444	gpatch1	95	36.831	ENSEBUG00000011286	gpatch1	72	41.797	Eptatretus_burgeri
ENSSDUG00000007444	gpatch1	89	50.335	ENSEASG00005021162	GPATCH1	88	52.447	Equus_asinus_asinus
ENSSDUG00000007444	gpatch1	90	50.000	ENSECAG00000022743	GPATCH1	79	52.941	Equus_caballus
ENSSDUG00000007444	gpatch1	72	53.846	ENSEEUG00000012925	GPATCH1	72	53.202	Erinaceus_europaeus
ENSSDUG00000007444	gpatch1	99	56.008	ENSELUG00000018195	gpatch1	80	61.958	Esox_lucius
ENSSDUG00000007444	gpatch1	90	48.724	ENSFCAG00000014917	GPATCH1	81	51.557	Felis_catus
ENSSDUG00000007444	gpatch1	93	48.608	ENSFALG00000007821	GPATCH1	81	50.249	Ficedula_albicollis
ENSSDUG00000007444	gpatch1	87	49.943	ENSFDAG00000003871	GPATCH1	82	52.645	Fukomys_damarensis
ENSSDUG00000007444	gpatch1	74	62.812	ENSGMOG00000003830	gpatch1	88	51.646	Gadus_morhua
ENSSDUG00000007444	gpatch1	93	48.553	ENSGALG00000004839	GPATCH1	84	50.814	Gallus_gallus
ENSSDUG00000007444	gpatch1	91	70.154	ENSGACG00000017544	gpatch1	96	68.043	Gasterosteus_aculeatus
ENSSDUG00000007444	gpatch1	89	50.840	ENSGAGG00000010067	GPATCH1	81	52.070	Gopherus_agassizii
ENSSDUG00000007444	gpatch1	87	47.771	ENSGGOG00000010862	GPATCH1	81	51.351	Gorilla_gorilla
ENSSDUG00000007444	gpatch1	100	74.848	ENSHBUG00000023462	gpatch1	100	74.141	Haplochromis_burtoni
ENSSDUG00000007444	gpatch1	90	49.777	ENSHGLG00000009334	GPATCH1	81	52.250	Heterocephalus_glaber_female
ENSSDUG00000007444	gpatch1	90	49.666	ENSHGLG00100018074	GPATCH1	81	52.125	Heterocephalus_glaber_male
ENSSDUG00000007444	gpatch1	94	56.794	ENSIPUG00000014977	gpatch1	81	59.337	Ictalurus_punctatus
ENSSDUG00000007444	gpatch1	90	49.057	ENSSTOG00000003720	GPATCH1	81	52.684	Ictidomys_tridecemlineatus
ENSSDUG00000007444	gpatch1	90	50.891	ENSJJAG00000023765	Gpatch1	81	52.559	Jaculus_jaculus
ENSSDUG00000007444	gpatch1	100	70.404	ENSKMAG00000017950	gpatch1	100	69.548	Kryptolebias_marmoratus
ENSSDUG00000007444	gpatch1	92	74.320	ENSLBEG00000026527	gpatch1	91	73.650	Labrus_bergylta
ENSSDUG00000007444	gpatch1	87	51.027	ENSLACG00000008130	GPATCH1	80	53.032	Latimeria_chalumnae
ENSSDUG00000007444	gpatch1	99	54.363	ENSLOCG00000001800	gpatch1	81	58.157	Lepisosteus_oculatus
ENSSDUG00000007444	gpatch1	90	49.779	ENSLAFG00000013589	GPATCH1	86	52.730	Loxodonta_africana
ENSSDUG00000007444	gpatch1	89	48.993	ENSMFAG00000034418	GPATCH1	98	61.765	Macaca_fascicularis
ENSSDUG00000007444	gpatch1	90	48.891	ENSMMUG00000011790	GPATCH1	98	62.500	Macaca_mulatta
ENSSDUG00000007444	gpatch1	90	48.391	ENSMNEG00000045084	GPATCH1	98	61.029	Macaca_nemestrina
ENSSDUG00000007444	gpatch1	90	42.205	ENSMLEG00000043840	GPATCH1	79	43.960	Mandrillus_leucophaeus
ENSSDUG00000007444	gpatch1	89	80.889	ENSMZEG00005001926	gpatch1	84	81.416	Maylandia_zebra
ENSSDUG00000007444	gpatch1	90	49.443	ENSMGAG00000005775	GPATCH1	81	50.506	Meleagris_gallopavo
ENSSDUG00000007444	gpatch1	89	45.212	ENSMICG00000004829	GPATCH1	83	47.708	Microcebus_murinus
ENSSDUG00000007444	gpatch1	90	49.836	ENSMOCG00000000174	Gpatch1	82	51.792	Microtus_ochrogaster
ENSSDUG00000007444	gpatch1	83	72.082	ENSMMOG00000002140	gpatch1	87	71.588	Mola_mola
ENSSDUG00000007444	gpatch1	90	50.557	ENSMODG00000012226	GPATCH1	81	52.553	Monodelphis_domestica
ENSSDUG00000007444	gpatch1	100	73.711	ENSMALG00000014386	gpatch1	100	72.149	Monopterus_albus
ENSSDUG00000007444	gpatch1	93	49.629	ENSMUSG00000063808	Gpatch1	98	76.042	Mus_musculus
ENSSDUG00000007444	gpatch1	80	52.298	MGP_PahariEiJ_G0012816	Gpatch1	98	77.083	Mus_pahari
ENSSDUG00000007444	gpatch1	93	49.523	MGP_SPRETEiJ_G0030681	Gpatch1	98	77.083	Mus_spretus
ENSSDUG00000007444	gpatch1	90	51.381	ENSMPUG00000007658	GPATCH1	81	52.351	Mustela_putorius_furo
ENSSDUG00000007444	gpatch1	90	49.057	ENSMLUG00000012161	GPATCH1	82	51.995	Myotis_lucifugus
ENSSDUG00000007444	gpatch1	90	50.280	ENSNGAG00000012455	Gpatch1	82	51.815	Nannospalax_galili
ENSSDUG00000007444	gpatch1	80	52.185	ENSNLEG00000007659	GPATCH1	98	61.029	Nomascus_leucogenys
ENSSDUG00000007444	gpatch1	74	47.368	ENSMEUG00000015174	GPATCH1	76	46.829	Notamacropus_eugenii
ENSSDUG00000007444	gpatch1	89	48.322	ENSODEG00000007103	GPATCH1	81	50.811	Octodon_degus
ENSSDUG00000007444	gpatch1	91	76.301	ENSONIG00000003302	gpatch1	100	72.636	Oreochromis_niloticus
ENSSDUG00000007444	gpatch1	90	51.233	ENSOANG00000012732	GPATCH1	82	52.698	Ornithorhynchus_anatinus
ENSSDUG00000007444	gpatch1	90	51.101	ENSOCUG00000015905	GPATCH1	81	53.117	Oryctolagus_cuniculus
ENSSDUG00000007444	gpatch1	91	68.950	ENSORLG00000018706	gpatch1	91	67.956	Oryzias_latipes
ENSSDUG00000007444	gpatch1	91	68.444	ENSOMEG00000022688	gpatch1	93	67.802	Oryzias_melastigma
ENSSDUG00000007444	gpatch1	83	53.390	ENSOGAG00000004016	GPATCH1	96	52.244	Otolemur_garnettii
ENSSDUG00000007444	gpatch1	79	53.817	ENSOARG00000004365	GPATCH1	81	52.764	Ovis_aries
ENSSDUG00000007444	gpatch1	90	48.391	ENSPPAG00000020990	GPATCH1	98	60.584	Pan_paniscus
ENSSDUG00000007444	gpatch1	90	48.835	ENSPPRG00000017245	GPATCH1	81	51.681	Panthera_pardus
ENSSDUG00000007444	gpatch1	90	49.501	ENSPTIG00000019649	GPATCH1	81	52.428	Panthera_tigris_altaica
ENSSDUG00000007444	gpatch1	90	48.280	ENSPTRG00000010803	GPATCH1	98	61.029	Pan_troglodytes
ENSSDUG00000007444	gpatch1	90	48.724	ENSPANG00000012374	GPATCH1	98	61.765	Papio_anubis
ENSSDUG00000007444	gpatch1	80	59.727	ENSPKIG00000020745	gpatch1	77	58.458	Paramormyrops_kingsleyae
ENSSDUG00000007444	gpatch1	89	50.616	ENSPSIG00000013433	GPATCH1	81	52.321	Pelodiscus_sinensis
ENSSDUG00000007444	gpatch1	90	50.885	ENSPEMG00000000636	Gpatch1	81	52.671	Peromyscus_maniculatus_bairdii
ENSSDUG00000007444	gpatch1	90	51.114	ENSPCIG00000021003	GPATCH1	85	52.304	Phascolarctos_cinereus
ENSSDUG00000007444	gpatch1	83	63.885	ENSPREG00000008264	gpatch1	80	63.256	Poecilia_reticulata
ENSSDUG00000007444	gpatch1	90	48.222	ENSPPYG00000009824	GPATCH1	81	50.435	Pongo_abelii
ENSSDUG00000007444	gpatch1	81	46.779	ENSPCAG00000005931	GPATCH1	73	47.790	Procavia_capensis
ENSSDUG00000007444	gpatch1	93	46.818	ENSPCOG00000009674	GPATCH1	87	50.501	Propithecus_coquereli
ENSSDUG00000007444	gpatch1	74	52.933	ENSPVAG00000017767	GPATCH1	76	52.374	Pteropus_vampyrus
ENSSDUG00000007444	gpatch1	84	80.676	ENSPNYG00000018189	gpatch1	89	81.576	Pundamilia_nyererei
ENSSDUG00000007444	gpatch1	92	57.295	ENSPNAG00000013187	gpatch1	81	59.611	Pygocentrus_nattereri
ENSSDUG00000007444	gpatch1	80	52.795	ENSRNOG00000011584	Gpatch1	81	52.179	Rattus_norvegicus
ENSSDUG00000007444	gpatch1	89	43.512	ENSRBIG00000034723	GPATCH1	82	46.077	Rhinopithecus_bieti
ENSSDUG00000007444	gpatch1	90	48.391	ENSRROG00000024428	GPATCH1	98	61.029	Rhinopithecus_roxellana
ENSSDUG00000007444	gpatch1	90	49.385	ENSSBOG00000034650	GPATCH1	81	52.070	Saimiri_boliviensis_boliviensis
ENSSDUG00000007444	gpatch1	90	51.724	ENSSHAG00000016016	GPATCH1	81	52.292	Sarcophilus_harrisii
ENSSDUG00000007444	gpatch1	99	67.278	ENSSMAG00000002883	gpatch1	100	63.678	Scophthalmus_maximus
ENSSDUG00000007444	gpatch1	87	96.977	ENSSLDG00000002856	gpatch1	97	96.977	Seriola_lalandi_dorsalis
ENSSDUG00000007444	gpatch1	69	56.701	ENSSARG00000004108	GPATCH1	70	56.406	Sorex_araneus
ENSSDUG00000007444	gpatch1	90	50.166	ENSSSCG00000002865	GPATCH1	84	52.553	Sus_scrofa
ENSSDUG00000007444	gpatch1	89	50.224	ENSTGUG00000009401	GPATCH1	82	50.249	Taeniopygia_guttata
ENSSDUG00000007444	gpatch1	80	70.191	ENSTRUG00000025081	gpatch1	92	65.072	Takifugu_rubripes
ENSSDUG00000007444	gpatch1	80	70.064	ENSTRUG00000005785	-	92	64.961	Takifugu_rubripes
ENSSDUG00000007444	gpatch1	80	67.372	ENSTNIG00000002554	gpatch1	97	66.955	Tetraodon_nigroviridis
ENSSDUG00000007444	gpatch1	59	52.198	ENSTBEG00000007750	-	79	51.412	Tupaia_belangeri
ENSSDUG00000007444	gpatch1	84	62.587	ENSTTRG00000012221	GPATCH1	75	61.189	Tursiops_truncatus
ENSSDUG00000007444	gpatch1	89	49.556	ENSUMAG00000014645	GPATCH1	85	72.381	Ursus_maritimus
ENSSDUG00000007444	gpatch1	78	68.786	ENSVPAG00000010313	GPATCH1	75	69.061	Vicugna_pacos
ENSSDUG00000007444	gpatch1	90	49.558	ENSVVUG00000016572	GPATCH1	81	52.256	Vulpes_vulpes
ENSSDUG00000007444	gpatch1	89	44.160	ENSXETG00000018276	gpatch1	84	48.924	Xenopus_tropicalis