EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000007513 (Gene tree)
Gene ID: 111230127
Gene Symbol: setdb1b
Alias: im:7143091|wu:fa04a12|wu:fj80h02|zgc:152899
Full Name: SET domain bifurcated 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 12920 bases
Position: chrBDQW01000258.1:859883-872802
Accession: 111230127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000010261	MBD	PF01429.19	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000010455	-	4192	XM_022756722	ENSSDUP00000010261	1246 (aa)	XP_022612443	UPI000BBECC68

Gene Model

Click here to download ENSSDUG00000007513's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007513	setdb1b	99	68.750	ENSG00000143379	SETDB1	92	64.929	Homo_sapiens
ENSSDUG00000007513	setdb1b	100	87.330	ENSAPOG00000016228	setdb1b	100	86.758	Acanthochromis_polyacanthus
ENSSDUG00000007513	setdb1b	99	69.792	ENSAMEG00000001160	SETDB1	92	63.636	Ailuropoda_melanoleuca
ENSSDUG00000007513	setdb1b	99	84.690	ENSACIG00000007359	setdb1b	99	84.529	Amphilophus_citrinellus
ENSSDUG00000007513	setdb1b	92	88.406	ENSAOCG00000005586	setdb1b	98	86.610	Amphiprion_ocellaris
ENSSDUG00000007513	setdb1b	92	88.596	ENSAPEG00000007774	setdb1b	99	79.919	Amphiprion_percula
ENSSDUG00000007513	setdb1b	100	88.287	ENSATEG00000023520	setdb1b	100	88.287	Anabas_testudineus
ENSSDUG00000007513	setdb1b	98	68.306	ENSAPLG00000013908	SETDB1	90	67.568	Anas_platyrhynchos
ENSSDUG00000007513	setdb1b	99	68.750	ENSANAG00000001819	SETDB1	92	64.929	Aotus_nancymaae
ENSSDUG00000007513	setdb1b	100	85.886	ENSACLG00000020489	setdb1b	100	85.886	Astatotilapia_calliptera
ENSSDUG00000007513	setdb1b	80	47.727	ENSAMXG00000010030	setdb1a	54	58.025	Astyanax_mexicanus
ENSSDUG00000007513	setdb1b	93	73.780	ENSAMXG00000016168	setdb1b	99	74.633	Astyanax_mexicanus
ENSSDUG00000007513	setdb1b	99	68.229	ENSBTAG00000000098	SETDB1	92	64.455	Bos_taurus
ENSSDUG00000007513	setdb1b	99	68.750	ENSCJAG00000006972	SETDB1	92	64.929	Callithrix_jacchus
ENSSDUG00000007513	setdb1b	99	69.792	ENSCAFG00000023501	SETDB1	93	63.636	Canis_familiaris
ENSSDUG00000007513	setdb1b	100	69.792	ENSCAFG00020013596	SETDB1	93	63.636	Canis_lupus_dingo
ENSSDUG00000007513	setdb1b	99	68.750	ENSCHIG00000010698	SETDB1	92	64.929	Capra_hircus
ENSSDUG00000007513	setdb1b	85	57.247	ENSTSYG00000012646	SETDB1	95	56.569	Carlito_syrichta
ENSSDUG00000007513	setdb1b	78	66.176	ENSCAPG00000013619	SETDB1	99	66.176	Cavia_aperea
ENSSDUG00000007513	setdb1b	99	69.271	ENSCPOG00000001632	SETDB1	99	53.488	Cavia_porcellus
ENSSDUG00000007513	setdb1b	99	68.750	ENSCCAG00000024882	SETDB1	92	64.929	Cebus_capucinus
ENSSDUG00000007513	setdb1b	99	68.750	ENSCATG00000044888	SETDB1	92	64.929	Cercocebus_atys
ENSSDUG00000007513	setdb1b	99	68.750	ENSCLAG00000000242	SETDB1	95	64.929	Chinchilla_lanigera
ENSSDUG00000007513	setdb1b	88	68.750	ENSCSAG00000018034	SETDB1	92	64.929	Chlorocebus_sabaeus
ENSSDUG00000007513	setdb1b	97	73.684	ENSCHOG00000004013	SETDB1	87	73.377	Choloepus_hoffmanni
ENSSDUG00000007513	setdb1b	99	66.154	ENSCPBG00000008716	SETDB1	90	65.128	Chrysemys_picta_bellii
ENSSDUG00000007513	setdb1b	84	68.750	ENSCANG00000036388	SETDB1	86	64.929	Colobus_angolensis_palliatus
ENSSDUG00000007513	setdb1b	99	68.750	ENSCGRG00001010822	Setdb1	94	64.929	Cricetulus_griseus_chok1gshd
ENSSDUG00000007513	setdb1b	99	68.750	ENSCGRG00000005953	Setdb1	94	64.929	Cricetulus_griseus_crigri
ENSSDUG00000007513	setdb1b	99	78.981	ENSCSEG00000002988	setdb1b	100	79.308	Cynoglossus_semilaevis
ENSSDUG00000007513	setdb1b	100	82.695	ENSCVAG00000008877	setdb1b	100	82.695	Cyprinodon_variegatus
ENSSDUG00000007513	setdb1b	62	86.869	ENSDARG00000041243	setdb1a	70	86.869	Danio_rerio
ENSSDUG00000007513	setdb1b	98	69.687	ENSDARG00000099021	setdb1b	99	69.603	Danio_rerio
ENSSDUG00000007513	setdb1b	99	69.271	ENSDNOG00000007754	SETDB1	92	65.403	Dasypus_novemcinctus
ENSSDUG00000007513	setdb1b	100	67.708	ENSDORG00000006830	Setdb1	96	63.981	Dipodomys_ordii
ENSSDUG00000007513	setdb1b	68	46.331	ENSEBUG00000005735	setdb1b	74	62.234	Eptatretus_burgeri
ENSSDUG00000007513	setdb1b	100	68.750	ENSEASG00005002061	SETDB1	92	64.929	Equus_asinus_asinus
ENSSDUG00000007513	setdb1b	99	68.750	ENSECAG00000023954	SETDB1	92	64.929	Equus_caballus
ENSSDUG00000007513	setdb1b	78	69.271	ENSEEUG00000015825	SETDB1	74	65.243	Erinaceus_europaeus
ENSSDUG00000007513	setdb1b	87	48.956	ENSELUG00000006204	-	85	58.255	Esox_lucius
ENSSDUG00000007513	setdb1b	93	78.144	ENSELUG00000013948	setdb1b	100	69.736	Esox_lucius
ENSSDUG00000007513	setdb1b	99	69.792	ENSFCAG00000009655	SETDB1	92	63.636	Felis_catus
ENSSDUG00000007513	setdb1b	99	68.750	ENSFDAG00000021515	SETDB1	91	64.929	Fukomys_damarensis
ENSSDUG00000007513	setdb1b	100	82.019	ENSFHEG00000022195	setdb1b	100	82.019	Fundulus_heteroclitus
ENSSDUG00000007513	setdb1b	99	69.022	ENSGMOG00000005993	setdb1b	100	69.177	Gadus_morhua
ENSSDUG00000007513	setdb1b	99	54.021	ENSGALG00000024051	SETDB1	82	67.568	Gallus_gallus
ENSSDUG00000007513	setdb1b	97	81.382	ENSGAFG00000012805	setdb1b	100	81.545	Gambusia_affinis
ENSSDUG00000007513	setdb1b	99	73.077	ENSGACG00000011675	setdb1b	95	83.163	Gasterosteus_aculeatus
ENSSDUG00000007513	setdb1b	99	66.497	ENSGAGG00000005348	SETDB1	90	65.990	Gopherus_agassizii
ENSSDUG00000007513	setdb1b	99	68.750	ENSGGOG00000016308	SETDB1	92	64.929	Gorilla_gorilla
ENSSDUG00000007513	setdb1b	100	85.886	ENSHBUG00000004618	setdb1b	100	85.886	Haplochromis_burtoni
ENSSDUG00000007513	setdb1b	99	68.750	ENSHGLG00000011098	SETDB1	96	64.929	Heterocephalus_glaber_female
ENSSDUG00000007513	setdb1b	99	68.750	ENSHGLG00100009789	SETDB1	95	64.929	Heterocephalus_glaber_male
ENSSDUG00000007513	setdb1b	100	78.000	ENSHCOG00000014567	setdb1b	100	77.804	Hippocampus_comes
ENSSDUG00000007513	setdb1b	59	62.346	ENSIPUG00000007923	setdb1a	69	60.606	Ictalurus_punctatus
ENSSDUG00000007513	setdb1b	98	69.451	ENSIPUG00000004536	setdb1	98	71.792	Ictalurus_punctatus
ENSSDUG00000007513	setdb1b	99	69.271	ENSSTOG00000006770	SETDB1	91	65.403	Ictidomys_tridecemlineatus
ENSSDUG00000007513	setdb1b	99	80.472	ENSLBEG00000025862	setdb1b	96	88.843	Labrus_bergylta
ENSSDUG00000007513	setdb1b	99	68.750	ENSLAFG00000004006	SETDB1	93	62.727	Loxodonta_africana
ENSSDUG00000007513	setdb1b	99	68.750	ENSMFAG00000042328	SETDB1	92	64.929	Macaca_fascicularis
ENSSDUG00000007513	setdb1b	99	68.750	ENSMMUG00000023235	SETDB1	96	64.929	Macaca_mulatta
ENSSDUG00000007513	setdb1b	99	68.750	ENSMNEG00000017223	SETDB1	92	64.929	Macaca_nemestrina
ENSSDUG00000007513	setdb1b	99	68.750	ENSMLEG00000033050	SETDB1	92	64.929	Mandrillus_leucophaeus
ENSSDUG00000007513	setdb1b	99	88.169	ENSMAMG00000015176	setdb1b	87	88.569	Mastacembelus_armatus
ENSSDUG00000007513	setdb1b	100	85.886	ENSMZEG00005016099	setdb1b	100	85.886	Maylandia_zebra
ENSSDUG00000007513	setdb1b	87	54.330	ENSMGAG00000001018	SETDB1	87	53.771	Meleagris_gallopavo
ENSSDUG00000007513	setdb1b	85	69.792	ENSMAUG00000021391	Setdb1	94	65.877	Mesocricetus_auratus
ENSSDUG00000007513	setdb1b	99	68.750	ENSMICG00000000425	SETDB1	96	64.929	Microcebus_murinus
ENSSDUG00000007513	setdb1b	99	69.271	ENSMOCG00000017407	Setdb1	94	65.403	Microtus_ochrogaster
ENSSDUG00000007513	setdb1b	93	89.826	ENSMMOG00000016162	setdb1b	98	90.276	Mola_mola
ENSSDUG00000007513	setdb1b	99	67.213	ENSMODG00000018821	SETDB1	83	59.813	Monodelphis_domestica
ENSSDUG00000007513	setdb1b	54	83.876	ENSMALG00000007801	setdb1b	55	85.207	Monopterus_albus
ENSSDUG00000007513	setdb1b	99	68.750	MGP_CAROLIEiJ_G0025342	Setdb1	92	64.929	Mus_caroli
ENSSDUG00000007513	setdb1b	99	70.718	ENSMUSG00000015697	Setdb1	91	66.502	Mus_musculus
ENSSDUG00000007513	setdb1b	99	69.792	ENSMPUG00000004298	SETDB1	56	63.636	Mustela_putorius_furo
ENSSDUG00000007513	setdb1b	99	68.750	ENSMLUG00000010486	SETDB1	92	64.455	Myotis_lucifugus
ENSSDUG00000007513	setdb1b	99	68.750	ENSNGAG00000020151	Setdb1	95	64.929	Nannospalax_galili
ENSSDUG00000007513	setdb1b	99	85.465	ENSNBRG00000003147	setdb1b	99	86.170	Neolamprologus_brichardi
ENSSDUG00000007513	setdb1b	100	63.902	ENSNLEG00000009996	SETDB1	92	60.714	Nomascus_leucogenys
ENSSDUG00000007513	setdb1b	85	67.708	ENSMEUG00000006544	-	80	63.710	Notamacropus_eugenii
ENSSDUG00000007513	setdb1b	97	69.663	ENSMEUG00000000555	-	88	68.889	Notamacropus_eugenii
ENSSDUG00000007513	setdb1b	96	56.742	ENSOPRG00000015349	SETDB1	96	55.684	Ochotona_princeps
ENSSDUG00000007513	setdb1b	99	68.750	ENSODEG00000012471	SETDB1	91	64.929	Octodon_degus
ENSSDUG00000007513	setdb1b	100	85.817	ENSONIG00000006454	setdb1b	100	85.817	Oreochromis_niloticus
ENSSDUG00000007513	setdb1b	98	69.271	ENSOCUG00000003642	SETDB1	92	65.072	Oryctolagus_cuniculus
ENSSDUG00000007513	setdb1b	100	83.333	ENSORLG00000010602	setdb1b	100	83.574	Oryzias_latipes
ENSSDUG00000007513	setdb1b	100	82.602	ENSORLG00015014543	setdb1b	100	83.240	Oryzias_latipes_hsok
ENSSDUG00000007513	setdb1b	100	83.962	ENSOMEG00000009457	setdb1b	99	84.406	Oryzias_melastigma
ENSSDUG00000007513	setdb1b	99	68.750	ENSOGAG00000010320	SETDB1	92	64.929	Otolemur_garnettii
ENSSDUG00000007513	setdb1b	99	68.750	ENSOARG00000020880	SETDB1	92	64.929	Ovis_aries
ENSSDUG00000007513	setdb1b	99	68.750	ENSPPAG00000041015	SETDB1	92	64.929	Pan_paniscus
ENSSDUG00000007513	setdb1b	99	69.271	ENSPPRG00000005462	SETDB1	92	63.182	Panthera_pardus
ENSSDUG00000007513	setdb1b	99	69.271	ENSPTIG00000014233	SETDB1	92	63.182	Panthera_tigris_altaica
ENSSDUG00000007513	setdb1b	99	68.750	ENSPTRG00000001267	SETDB1	92	64.929	Pan_troglodytes
ENSSDUG00000007513	setdb1b	99	68.750	ENSPANG00000020214	SETDB1	92	64.929	Papio_anubis
ENSSDUG00000007513	setdb1b	99	66.641	ENSPKIG00000010963	setdb1b	100	67.203	Paramormyrops_kingsleyae
ENSSDUG00000007513	setdb1b	94	68.783	ENSPEMG00000010553	Setdb1	97	62.389	Peromyscus_maniculatus_bairdii
ENSSDUG00000007513	setdb1b	99	62.437	ENSPMAG00000001573	setdb1b	84	61.809	Petromyzon_marinus
ENSSDUG00000007513	setdb1b	99	74.660	ENSPFOG00000004623	-	94	73.981	Poecilia_formosa
ENSSDUG00000007513	setdb1b	99	81.571	ENSPFOG00000004429	setdb1b	99	81.330	Poecilia_formosa
ENSSDUG00000007513	setdb1b	97	81.306	ENSPLAG00000017117	setdb1b	100	82.257	Poecilia_latipinna
ENSSDUG00000007513	setdb1b	99	81.862	ENSPLAG00000019076	-	100	82.789	Poecilia_latipinna
ENSSDUG00000007513	setdb1b	100	82.437	ENSPMEG00000006468	setdb1b	100	82.437	Poecilia_mexicana
ENSSDUG00000007513	setdb1b	100	82.478	ENSPREG00000017459	setdb1b	100	82.399	Poecilia_reticulata
ENSSDUG00000007513	setdb1b	99	68.750	ENSPPYG00000000887	SETDB1	92	64.929	Pongo_abelii
ENSSDUG00000007513	setdb1b	85	56.879	ENSPCAG00000002527	SETDB1	90	56.578	Procavia_capensis
ENSSDUG00000007513	setdb1b	99	68.750	ENSPCOG00000027869	SETDB1	96	64.929	Propithecus_coquereli
ENSSDUG00000007513	setdb1b	99	56.505	ENSPVAG00000004355	SETDB1	87	56.398	Pteropus_vampyrus
ENSSDUG00000007513	setdb1b	99	79.936	ENSPNYG00000003997	setdb1b	98	86.192	Pundamilia_nyererei
ENSSDUG00000007513	setdb1b	98	70.016	ENSPNAG00000021617	setdb1b	99	69.146	Pygocentrus_nattereri
ENSSDUG00000007513	setdb1b	99	69.271	ENSRNOG00000021143	Setdb1	95	65.403	Rattus_norvegicus
ENSSDUG00000007513	setdb1b	99	68.750	ENSRBIG00000042359	SETDB1	92	64.929	Rhinopithecus_bieti
ENSSDUG00000007513	setdb1b	99	68.750	ENSRROG00000032628	SETDB1	92	64.929	Rhinopithecus_roxellana
ENSSDUG00000007513	setdb1b	98	68.750	ENSSBOG00000028608	SETDB1	90	64.929	Saimiri_boliviensis_boliviensis
ENSSDUG00000007513	setdb1b	99	67.708	ENSSHAG00000012701	SETDB1	96	60.987	Sarcophilus_harrisii
ENSSDUG00000007513	setdb1b	99	67.609	ENSSFOG00015022183	setdb1	100	67.945	Scleropages_formosus
ENSSDUG00000007513	setdb1b	100	99.121	ENSSLDG00000015209	setdb1b	100	99.121	Seriola_lalandi_dorsalis
ENSSDUG00000007513	setdb1b	100	57.495	ENSSPUG00000002969	SETDB1	94	57.521	Sphenodon_punctatus
ENSSDUG00000007513	setdb1b	99	68.750	ENSSSCG00000006645	SETDB1	92	64.929	Sus_scrofa
ENSSDUG00000007513	setdb1b	94	66.304	ENSTGUG00000004684	SETDB1	90	65.761	Taeniopygia_guttata
ENSSDUG00000007513	setdb1b	99	76.954	ENSTRUG00000014641	setdb1b	99	77.269	Takifugu_rubripes
ENSSDUG00000007513	setdb1b	99	70.628	ENSTNIG00000008065	setdb1b	99	70.424	Tetraodon_nigroviridis
ENSSDUG00000007513	setdb1b	93	68.750	ENSTBEG00000009306	SETDB1	89	62.727	Tupaia_belangeri
ENSSDUG00000007513	setdb1b	85	68.750	ENSTTRG00000006966	SETDB1	79	64.929	Tursiops_truncatus
ENSSDUG00000007513	setdb1b	99	69.792	ENSUAMG00000026724	SETDB1	55	65.877	Ursus_americanus
ENSSDUG00000007513	setdb1b	99	69.792	ENSUMAG00000003141	SETDB1	92	65.877	Ursus_maritimus
ENSSDUG00000007513	setdb1b	79	60.345	ENSVPAG00000005440	SETDB1	77	59.727	Vicugna_pacos
ENSSDUG00000007513	setdb1b	99	69.792	ENSVVUG00000011637	SETDB1	92	63.636	Vulpes_vulpes
ENSSDUG00000007513	setdb1b	99	73.077	ENSXETG00000008936	setdb1	89	73.077	Xenopus_tropicalis
ENSSDUG00000007513	setdb1b	99	79.104	ENSXCOG00000019497	setdb1b	91	78.109	Xiphophorus_couchianus
ENSSDUG00000007513	setdb1b	100	82.171	ENSXMAG00000016600	setdb1b	100	82.884	Xiphophorus_maculatus