EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000007542 (Gene tree)
Gene ID: 111219906
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4794 bases
Position: chrBDQW01000068.1:15616984-15621777
Accession: 111219906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000010307	SAP	PF02037.27	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000010500	-	1850	XM_022742753	ENSSDUP00000010307	610 (aa)	XP_022598474	UPI000BBEBEF7

Gene Model

Click here to download ENSSDUG00000007542's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007542's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007542	xrcc6	99	56.373	ENSG00000196419	XRCC6	99	56.536	Homo_sapiens
ENSSDUG00000007542	xrcc6	99	88.506	ENSAPOG00000012704	xrcc6	100	88.506	Acanthochromis_polyacanthus
ENSSDUG00000007542	xrcc6	100	87.705	ENSACIG00000021277	xrcc6	100	87.705	Amphilophus_citrinellus
ENSSDUG00000007542	xrcc6	100	88.525	ENSAOCG00000021344	xrcc6	100	88.525	Amphiprion_ocellaris
ENSSDUG00000007542	xrcc6	100	88.689	ENSAPEG00000020712	xrcc6	100	88.689	Amphiprion_percula
ENSSDUG00000007542	xrcc6	100	90.328	ENSATEG00000007119	xrcc6	100	90.328	Anabas_testudineus
ENSSDUG00000007542	xrcc6	90	59.818	ENSAPLG00000004469	XRCC6	99	59.818	Anas_platyrhynchos
ENSSDUG00000007542	xrcc6	99	50.327	ENSANAG00000035230	-	99	50.163	Aotus_nancymaae
ENSSDUG00000007542	xrcc6	99	56.373	ENSANAG00000018684	XRCC6	98	57.482	Aotus_nancymaae
ENSSDUG00000007542	xrcc6	99	47.411	ENSANAG00000023445	-	99	47.411	Aotus_nancymaae
ENSSDUG00000007542	xrcc6	99	49.261	ENSANAG00000020017	-	99	49.261	Aotus_nancymaae
ENSSDUG00000007542	xrcc6	100	88.525	ENSACLG00000018608	xrcc6	100	88.525	Astatotilapia_calliptera
ENSSDUG00000007542	xrcc6	99	78.982	ENSAMXG00000007545	xrcc6	99	79.112	Astyanax_mexicanus
ENSSDUG00000007542	xrcc6	99	56.373	ENSCJAG00000045512	XRCC6	99	56.373	Callithrix_jacchus
ENSSDUG00000007542	xrcc6	99	55.556	ENSTSYG00000011348	XRCC6	99	55.882	Carlito_syrichta
ENSSDUG00000007542	xrcc6	99	47.291	ENSCCAG00000037663	-	97	47.126	Cebus_capucinus
ENSSDUG00000007542	xrcc6	99	53.105	ENSCCAG00000030041	-	95	52.941	Cebus_capucinus
ENSSDUG00000007542	xrcc6	99	53.681	ENSCCAG00000030468	-	99	53.681	Cebus_capucinus
ENSSDUG00000007542	xrcc6	99	46.154	ENSCCAG00000035711	-	99	46.154	Cebus_capucinus
ENSSDUG00000007542	xrcc6	99	56.373	ENSCATG00000042366	XRCC6	99	56.536	Cercocebus_atys
ENSSDUG00000007542	xrcc6	99	55.974	ENSCLAG00000016669	XRCC6	99	55.810	Chinchilla_lanigera
ENSSDUG00000007542	xrcc6	99	56.373	ENSCSAG00000005784	XRCC6	99	56.536	Chlorocebus_sabaeus
ENSSDUG00000007542	xrcc6	99	58.497	ENSCPBG00000020535	XRCC6	99	58.170	Chrysemys_picta_bellii
ENSSDUG00000007542	xrcc6	98	34.942	ENSCING00000000633	-	95	34.708	Ciona_intestinalis
ENSSDUG00000007542	xrcc6	99	56.373	ENSCANG00000031032	XRCC6	99	56.536	Colobus_angolensis_palliatus
ENSSDUG00000007542	xrcc6	99	51.803	ENSCGRG00001019029	Xrcc6	99	51.803	Cricetulus_griseus_chok1gshd
ENSSDUG00000007542	xrcc6	99	55.902	ENSCGRG00000001528	Xrcc6	99	55.902	Cricetulus_griseus_crigri
ENSSDUG00000007542	xrcc6	100	83.115	ENSCSEG00000020434	xrcc6	100	83.115	Cynoglossus_semilaevis
ENSSDUG00000007542	xrcc6	100	84.754	ENSCVAG00000002189	xrcc6	100	84.754	Cyprinodon_variegatus
ENSSDUG00000007542	xrcc6	99	75.698	ENSDARG00000071551	xrcc6	99	75.369	Danio_rerio
ENSSDUG00000007542	xrcc6	78	53.140	ENSETEG00000015333	-	67	53.140	Echinops_telfairi
ENSSDUG00000007542	xrcc6	99	55.392	ENSEASG00005001514	XRCC6	99	55.392	Equus_asinus_asinus
ENSSDUG00000007542	xrcc6	99	55.719	ENSECAG00000017563	XRCC6	99	56.007	Equus_caballus
ENSSDUG00000007542	xrcc6	100	75.574	ENSELUG00000020301	xrcc6	100	75.574	Esox_lucius
ENSSDUG00000007542	xrcc6	99	57.561	ENSFALG00000011908	XRCC6	97	57.561	Ficedula_albicollis
ENSSDUG00000007542	xrcc6	100	86.721	ENSFHEG00000016833	xrcc6	100	86.721	Fundulus_heteroclitus
ENSSDUG00000007542	xrcc6	99	68.404	ENSGMOG00000013524	xrcc6	100	68.241	Gadus_morhua
ENSSDUG00000007542	xrcc6	99	57.861	ENSGALG00000011932	XRCC6	99	58.023	Gallus_gallus
ENSSDUG00000007542	xrcc6	100	83.279	ENSGAFG00000008130	xrcc6	100	83.279	Gambusia_affinis
ENSSDUG00000007542	xrcc6	99	86.319	ENSGACG00000004868	xrcc6	99	85.179	Gasterosteus_aculeatus
ENSSDUG00000007542	xrcc6	99	58.333	ENSGAGG00000017518	XRCC6	99	58.007	Gopherus_agassizii
ENSSDUG00000007542	xrcc6	99	56.373	ENSGGOG00000015885	XRCC6	96	60.526	Gorilla_gorilla
ENSSDUG00000007542	xrcc6	93	88.339	ENSHBUG00000023281	xrcc6	100	88.339	Haplochromis_burtoni
ENSSDUG00000007542	xrcc6	99	56.066	ENSHGLG00000018078	XRCC6	99	55.902	Heterocephalus_glaber_female
ENSSDUG00000007542	xrcc6	99	56.066	ENSHGLG00100011264	XRCC6	99	55.902	Heterocephalus_glaber_male
ENSSDUG00000007542	xrcc6	100	80.820	ENSHCOG00000009821	xrcc6	100	80.820	Hippocampus_comes
ENSSDUG00000007542	xrcc6	99	76.683	ENSIPUG00000000767	xrcc6	99	76.809	Ictalurus_punctatus
ENSSDUG00000007542	xrcc6	99	55.974	ENSSTOG00000009490	XRCC6	99	55.646	Ictidomys_tridecemlineatus
ENSSDUG00000007542	xrcc6	99	52.124	ENSJJAG00000017136	Xrcc6	99	52.941	Jaculus_jaculus
ENSSDUG00000007542	xrcc6	99	87.192	ENSKMAG00000002141	xrcc6	99	87.192	Kryptolebias_marmoratus
ENSSDUG00000007542	xrcc6	99	86.513	ENSLBEG00000002691	xrcc6	99	86.513	Labrus_bergylta
ENSSDUG00000007542	xrcc6	87	63.366	ENSLOCG00000011533	xrcc6	99	63.366	Lepisosteus_oculatus
ENSSDUG00000007542	xrcc6	99	56.373	ENSMFAG00000003352	XRCC6	99	56.536	Macaca_fascicularis
ENSSDUG00000007542	xrcc6	99	56.373	ENSMMUG00000001856	XRCC6	99	56.536	Macaca_mulatta
ENSSDUG00000007542	xrcc6	99	56.373	ENSMNEG00000035076	XRCC6	99	56.536	Macaca_nemestrina
ENSSDUG00000007542	xrcc6	99	56.373	ENSMLEG00000019869	XRCC6	99	56.536	Mandrillus_leucophaeus
ENSSDUG00000007542	xrcc6	100	86.088	ENSMAMG00000003368	xrcc6	100	86.088	Mastacembelus_armatus
ENSSDUG00000007542	xrcc6	96	85.860	ENSMAMG00000003405	xrcc6	97	85.836	Mastacembelus_armatus
ENSSDUG00000007542	xrcc6	100	88.361	ENSMZEG00005028080	xrcc6	100	88.361	Maylandia_zebra
ENSSDUG00000007542	xrcc6	99	57.767	ENSMGAG00000012146	XRCC6	99	57.929	Meleagris_gallopavo
ENSSDUG00000007542	xrcc6	99	55.902	ENSMAUG00000017340	Xrcc6	99	55.902	Mesocricetus_auratus
ENSSDUG00000007542	xrcc6	99	54.918	ENSMOCG00000015717	Xrcc6	99	55.082	Microtus_ochrogaster
ENSSDUG00000007542	xrcc6	99	85.265	ENSMMOG00000003536	xrcc6	99	85.265	Mola_mola
ENSSDUG00000007542	xrcc6	100	87.869	ENSMALG00000013912	xrcc6	95	87.869	Monopterus_albus
ENSSDUG00000007542	xrcc6	99	53.443	MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.443	Mus_caroli
ENSSDUG00000007542	xrcc6	99	57.049	ENSMUSG00000022471	Xrcc6	99	59.696	Mus_musculus
ENSSDUG00000007542	xrcc6	99	56.721	MGP_PahariEiJ_G0020069	Xrcc6	99	56.721	Mus_pahari
ENSSDUG00000007542	xrcc6	96	57.363	MGP_SPRETEiJ_G0020967	Xrcc6	99	57.363	Mus_spretus
ENSSDUG00000007542	xrcc6	99	55.246	ENSNGAG00000013750	Xrcc6	99	55.246	Nannospalax_galili
ENSSDUG00000007542	xrcc6	100	88.525	ENSNBRG00000004125	xrcc6	100	88.525	Neolamprologus_brichardi
ENSSDUG00000007542	xrcc6	96	56.849	ENSOPRG00000002386	XRCC6	99	56.849	Ochotona_princeps
ENSSDUG00000007542	xrcc6	99	55.646	ENSODEG00000015847	XRCC6	99	55.810	Octodon_degus
ENSSDUG00000007542	xrcc6	100	87.705	ENSONIG00000019715	xrcc6	100	87.705	Oreochromis_niloticus
ENSSDUG00000007542	xrcc6	68	59.518	ENSOANG00000011328	XRCC6	99	59.518	Ornithorhynchus_anatinus
ENSSDUG00000007542	xrcc6	99	55.483	ENSOCUG00000006948	XRCC6	99	55.483	Oryctolagus_cuniculus
ENSSDUG00000007542	xrcc6	100	83.797	ENSORLG00020007820	xrcc6	100	83.797	Oryzias_latipes_hni
ENSSDUG00000007542	xrcc6	100	83.470	ENSORLG00015006406	xrcc6	100	83.470	Oryzias_latipes_hsok
ENSSDUG00000007542	xrcc6	100	85.106	ENSOMEG00000008998	xrcc6	100	85.106	Oryzias_melastigma
ENSSDUG00000007542	xrcc6	99	55.974	ENSOGAG00000008821	XRCC6	99	55.646	Otolemur_garnettii
ENSSDUG00000007542	xrcc6	92	57.027	ENSPPAG00000037167	XRCC6	99	57.027	Pan_paniscus
ENSSDUG00000007542	xrcc6	99	56.373	ENSPTRG00000045824	XRCC6	99	57.192	Pan_troglodytes
ENSSDUG00000007542	xrcc6	99	56.373	ENSPTRG00000022548	XRCC6	99	57.192	Pan_troglodytes
ENSSDUG00000007542	xrcc6	99	56.209	ENSPANG00000001252	XRCC6	99	60.776	Papio_anubis
ENSSDUG00000007542	xrcc6	99	71.382	ENSPKIG00000003974	xrcc6	99	71.382	Paramormyrops_kingsleyae
ENSSDUG00000007542	xrcc6	99	82.226	ENSPMGG00000014220	xrcc6	100	82.392	Periophthalmus_magnuspinnatus
ENSSDUG00000007542	xrcc6	99	55.246	ENSPEMG00000023446	Xrcc6	99	55.246	Peromyscus_maniculatus_bairdii
ENSSDUG00000007542	xrcc6	99	57.610	ENSPCIG00000026409	XRCC6	99	57.447	Phascolarctos_cinereus
ENSSDUG00000007542	xrcc6	100	85.902	ENSPFOG00000017173	xrcc6	100	85.902	Poecilia_formosa
ENSSDUG00000007542	xrcc6	100	85.574	ENSPLAG00000000562	xrcc6	100	85.574	Poecilia_latipinna
ENSSDUG00000007542	xrcc6	100	85.738	ENSPMEG00000018478	xrcc6	100	85.738	Poecilia_mexicana
ENSSDUG00000007542	xrcc6	100	85.621	ENSPREG00000020957	xrcc6	93	85.621	Poecilia_reticulata
ENSSDUG00000007542	xrcc6	99	49.020	ENSPPYG00000011876	XRCC6	99	49.183	Pongo_abelii
ENSSDUG00000007542	xrcc6	99	55.574	ENSPVAG00000001168	XRCC6	99	55.082	Pteropus_vampyrus
ENSSDUG00000007542	xrcc6	100	88.525	ENSPNYG00000003815	xrcc6	100	84.243	Pundamilia_nyererei
ENSSDUG00000007542	xrcc6	99	55.902	ENSRNOG00000006392	Xrcc6	99	56.066	Rattus_norvegicus
ENSSDUG00000007542	xrcc6	99	52.288	ENSRBIG00000039794	XRCC6	99	53.516	Rhinopithecus_bieti
ENSSDUG00000007542	xrcc6	99	56.373	ENSRROG00000030297	XRCC6	97	59.375	Rhinopithecus_roxellana
ENSSDUG00000007542	xrcc6	67	52.567	ENSSBOG00000024724	-	99	52.567	Saimiri_boliviensis_boliviensis
ENSSDUG00000007542	xrcc6	99	56.699	ENSSHAG00000010790	XRCC6	99	56.536	Sarcophilus_harrisii
ENSSDUG00000007542	xrcc6	99	73.727	ENSSFOG00015014409	xrcc6	99	73.849	Scleropages_formosus
ENSSDUG00000007542	xrcc6	100	91.311	ENSSMAG00000006496	xrcc6	100	91.311	Scophthalmus_maximus
ENSSDUG00000007542	xrcc6	100	98.689	ENSSLDG00000009974	xrcc6	100	98.689	Seriola_lalandi_dorsalis
ENSSDUG00000007542	xrcc6	99	58.497	ENSSPUG00000012086	XRCC6	99	58.660	Sphenodon_punctatus
ENSSDUG00000007542	xrcc6	100	88.689	ENSSPAG00000015199	xrcc6	100	88.689	Stegastes_partitus
ENSSDUG00000007542	xrcc6	96	58.603	ENSTGUG00000009852	-	95	58.532	Taeniopygia_guttata
ENSSDUG00000007542	xrcc6	99	79.639	ENSTRUG00000017070	xrcc6	99	80.131	Takifugu_rubripes
ENSSDUG00000007542	xrcc6	96	78.173	ENSTNIG00000012947	xrcc6	99	78.173	Tetraodon_nigroviridis
ENSSDUG00000007542	xrcc6	96	52.055	ENSTBEG00000011736	XRCC6	99	52.055	Tupaia_belangeri
ENSSDUG00000007542	xrcc6	99	46.952	ENSTTRG00000006749	XRCC6	99	47.117	Tursiops_truncatus
ENSSDUG00000007542	xrcc6	100	85.410	ENSXMAG00000009691	xrcc6	100	85.410	Xiphophorus_maculatus