EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000007587 (Gene tree)
Gene ID: 111224336
Gene Symbol: -
Alias: -
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 54371 bases
Position: chrBDQW01000129.1:777500-831870
Accession: 111224336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000010396	RRM_1	PF00076.22	1.2e-10	1	1
ENSSDUP00000010385	RRM_1	PF00076.22	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000010579	-	4791	XM_022748782	ENSSDUP00000010385	292 (aa)	XP_022604503	UPI000BBE7D8C
ENSSDUT00000010591	-	4743	-	ENSSDUP00000010396	276 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000007587's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000007587's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000007587	-	75	56.444	ENSSDUG00000001723	-	67	57.991
ENSSDUG00000007587	-	73	57.273	ENSSDUG00000006730	-	86	51.724
ENSSDUG00000007587	-	100	73.649	ENSSDUG00000012473	-	100	73.649
ENSSDUG00000007587	-	79	57.391	ENSSDUG00000002411	raly	96	51.712

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000007587	-	100	72.973	ENSAPOG00000008744	-	100	72.973	Acanthochromis_polyacanthus
ENSSDUG00000007587	-	97	67.010	ENSACIG00000007143	-	97	67.010	Amphilophus_citrinellus
ENSSDUG00000007587	-	100	97.260	ENSAOCG00000001605	-	100	97.260	Amphiprion_ocellaris
ENSSDUG00000007587	-	100	73.649	ENSAOCG00000023599	-	100	73.649	Amphiprion_ocellaris
ENSSDUG00000007587	-	97	66.443	ENSATEG00000022219	-	93	70.470	Anabas_testudineus
ENSSDUG00000007587	-	77	96.889	ENSATEG00000023356	-	87	96.889	Anabas_testudineus
ENSSDUG00000007587	-	100	73.898	ENSACLG00000011720	-	100	73.898	Astatotilapia_calliptera
ENSSDUG00000007587	-	100	96.246	ENSACLG00000006949	-	100	95.222	Astatotilapia_calliptera
ENSSDUG00000007587	-	100	65.657	ENSAMXG00000032617	-	100	65.657	Astyanax_mexicanus
ENSSDUG00000007587	-	100	90.253	ENSAMXG00000019031	-	100	89.892	Astyanax_mexicanus
ENSSDUG00000007587	-	100	67.568	ENSCSEG00000014237	-	100	67.230	Cynoglossus_semilaevis
ENSSDUG00000007587	-	100	72.635	ENSCVAG00000013624	-	100	72.635	Cyprinodon_variegatus
ENSSDUG00000007587	-	100	96.928	ENSCVAG00000018104	-	100	96.928	Cyprinodon_variegatus
ENSSDUG00000007587	-	59	76.608	ENSDARG00000090292	ralyl	81	78.395	Danio_rerio
ENSSDUG00000007587	-	94	75.627	ENSELUG00000001702	-	97	77.419	Esox_lucius
ENSSDUG00000007587	-	57	78.182	ENSGMOG00000005914	-	100	78.182	Gadus_morhua
ENSSDUG00000007587	-	59	94.220	ENSGACG00000004991	-	91	96.386	Gasterosteus_aculeatus
ENSSDUG00000007587	-	100	73.649	ENSHBUG00000010040	-	100	73.649	Haplochromis_burtoni
ENSSDUG00000007587	-	100	96.246	ENSHBUG00000015412	-	100	95.222	Haplochromis_burtoni
ENSSDUG00000007587	-	100	89.726	ENSIPUG00000000507	ralyl	100	89.726	Ictalurus_punctatus
ENSSDUG00000007587	-	100	70.270	ENSKMAG00000022093	-	100	71.959	Kryptolebias_marmoratus
ENSSDUG00000007587	-	100	95.890	ENSKMAG00000018155	-	100	95.890	Kryptolebias_marmoratus
ENSSDUG00000007587	-	100	73.311	ENSLBEG00000012873	-	100	72.973	Labrus_bergylta
ENSSDUG00000007587	-	100	93.857	ENSLBEG00000011011	-	100	94.198	Labrus_bergylta
ENSSDUG00000007587	-	100	83.219	ENSLOCG00000012787	ralyl	99	82.877	Lepisosteus_oculatus
ENSSDUG00000007587	-	99	70.000	ENSMAMG00000001723	-	97	70.000	Mastacembelus_armatus
ENSSDUG00000007587	-	98	92.096	ENSMZEG00005018748	-	99	91.065	Maylandia_zebra
ENSSDUG00000007587	-	100	73.898	ENSMZEG00005024447	-	100	73.898	Maylandia_zebra
ENSSDUG00000007587	-	97	66.333	ENSMMOG00000020441	-	86	68.000	Mola_mola
ENSSDUG00000007587	-	100	73.986	ENSMALG00000019019	-	78	73.986	Monopterus_albus
ENSSDUG00000007587	-	100	96.575	ENSMALG00000012952	-	100	96.575	Monopterus_albus
ENSSDUG00000007587	-	97	67.698	ENSNBRG00000011206	-	97	67.698	Neolamprologus_brichardi
ENSSDUG00000007587	-	98	93.127	ENSNBRG00000011376	-	99	93.127	Neolamprologus_brichardi
ENSSDUG00000007587	-	100	96.575	ENSORLG00000012719	-	100	96.575	Oryzias_latipes
ENSSDUG00000007587	-	100	71.622	ENSORLG00000017934	-	100	70.946	Oryzias_latipes
ENSSDUG00000007587	-	100	96.575	ENSORLG00020004438	-	100	96.575	Oryzias_latipes_hni
ENSSDUG00000007587	-	100	70.946	ENSORLG00020000082	-	100	70.270	Oryzias_latipes_hni
ENSSDUG00000007587	-	100	96.575	ENSORLG00015004727	-	100	96.575	Oryzias_latipes_hsok
ENSSDUG00000007587	-	100	71.622	ENSORLG00015004280	-	100	70.946	Oryzias_latipes_hsok
ENSSDUG00000007587	-	100	71.622	ENSOMEG00000011821	-	100	70.946	Oryzias_melastigma
ENSSDUG00000007587	-	100	97.464	ENSOMEG00000001170	-	100	97.464	Oryzias_melastigma
ENSSDUG00000007587	-	100	80.205	ENSPKIG00000015926	-	100	80.205	Paramormyrops_kingsleyae
ENSSDUG00000007587	-	99	67.230	ENSPMGG00000009532	-	99	67.230	Periophthalmus_magnuspinnatus
ENSSDUG00000007587	-	80	83.122	ENSPMGG00000014481	-	98	81.857	Periophthalmus_magnuspinnatus
ENSSDUG00000007587	-	97	70.134	ENSPFOG00000006120	-	99	69.667	Poecilia_formosa
ENSSDUG00000007587	-	97	96.503	ENSPLAG00000011323	ralyl	100	96.503	Poecilia_latipinna
ENSSDUG00000007587	-	97	70.221	ENSPLAG00000009877	-	76	69.708	Poecilia_latipinna
ENSSDUG00000007587	-	97	96.503	ENSPMEG00000023847	ralyl	100	96.503	Poecilia_mexicana
ENSSDUG00000007587	-	97	70.221	ENSPMEG00000013624	-	80	69.708	Poecilia_mexicana
ENSSDUG00000007587	-	97	72.822	ENSPREG00000013805	-	100	67.722	Poecilia_reticulata
ENSSDUG00000007587	-	97	92.657	ENSPREG00000001956	ralyl	100	94.406	Poecilia_reticulata
ENSSDUG00000007587	-	97	67.698	ENSPNYG00000008772	-	97	67.698	Pundamilia_nyererei
ENSSDUG00000007587	-	98	92.096	ENSPNYG00000003548	-	99	91.065	Pundamilia_nyererei
ENSSDUG00000007587	-	100	68.601	ENSPNAG00000026098	-	100	67.808	Pygocentrus_nattereri
ENSSDUG00000007587	-	100	90.217	ENSPNAG00000000498	-	88	89.855	Pygocentrus_nattereri
ENSSDUG00000007587	-	100	89.796	ENSSFOG00015009401	-	100	88.095	Scleropages_formosus
ENSSDUG00000007587	-	100	72.662	ENSSFOG00015004575	-	96	80.150	Scleropages_formosus
ENSSDUG00000007587	-	100	94.539	ENSSMAG00000005608	-	100	93.515	Scophthalmus_maximus
ENSSDUG00000007587	-	97	70.526	ENSSMAG00000015907	-	93	70.526	Scophthalmus_maximus
ENSSDUG00000007587	-	100	99.317	ENSSLDG00000020603	-	100	99.317	Seriola_lalandi_dorsalis
ENSSDUG00000007587	-	100	73.311	ENSSLDG00000011534	-	100	73.311	Seriola_lalandi_dorsalis
ENSSDUG00000007587	-	97	65.328	ENSSPAG00000013858	-	96	63.604	Stegastes_partitus
ENSSDUG00000007587	-	82	75.732	ENSTRUG00000003829	-	95	71.025	Takifugu_rubripes
ENSSDUG00000007587	-	97	67.687	ENSTNIG00000005594	-	99	67.687	Tetraodon_nigroviridis
ENSSDUG00000007587	-	100	69.728	ENSXETG00000017729	ralyl	99	70.748	Xenopus_tropicalis
ENSSDUG00000007587	-	97	93.537	ENSXCOG00000015156	-	93	93.537	Xiphophorus_couchianus
ENSSDUG00000007587	-	100	73.649	ENSXMAG00000007614	-	100	73.649	Xiphophorus_maculatus
ENSSDUG00000007587	-	100	97.603	ENSXMAG00000008396	-	100	97.603	Xiphophorus_maculatus