EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000008072 (Gene tree)
Gene ID: 111227668
Gene Symbol: ubr5
Alias: edd1|wu:fa16c12
Full Name: ubiquitin protein ligase E3 component n-recognin 5
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 24410 bases
Position: chrBDQW01000191.1:2268327-2292736
Accession: 111227668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000011143	PABP	PF00658.18	9.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000011352	-	7587	XM_022753272	ENSSDUP00000011143	2528 (aa)	XP_022608993	-

Gene Model

Click here to download ENSSDUG00000008072's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000008072	ubr5	100	89.277	ENSG00000104517	UBR5	100	88.636	Homo_sapiens
ENSSDUG00000008072	ubr5	100	97.487	ENSAPOG00000007770	ubr5	90	97.487	Acanthochromis_polyacanthus
ENSSDUG00000008072	ubr5	100	89.286	ENSAMEG00000014808	UBR5	91	89.089	Ailuropoda_melanoleuca
ENSSDUG00000008072	ubr5	100	97.486	ENSACIG00000003786	ubr5	100	97.486	Amphilophus_citrinellus
ENSSDUG00000008072	ubr5	100	97.711	ENSAPEG00000007895	ubr5	100	97.711	Amphiprion_percula
ENSSDUG00000008072	ubr5	100	98.421	ENSATEG00000024796	ubr5	100	98.421	Anabas_testudineus
ENSSDUG00000008072	ubr5	100	88.898	ENSAPLG00000004191	UBR5	92	88.976	Anas_platyrhynchos
ENSSDUG00000008072	ubr5	96	88.807	ENSACAG00000008995	UBR5	100	88.602	Anolis_carolinensis
ENSSDUG00000008072	ubr5	100	88.924	ENSANAG00000032305	UBR5	91	88.924	Aotus_nancymaae
ENSSDUG00000008072	ubr5	100	97.004	ENSACLG00000011122	ubr5	92	96.590	Astatotilapia_calliptera
ENSSDUG00000008072	ubr5	100	94.331	ENSAMXG00000020014	ubr5	100	94.370	Astyanax_mexicanus
ENSSDUG00000008072	ubr5	100	88.989	ENSBTAG00000021209	UBR5	91	88.989	Bos_taurus
ENSSDUG00000008072	ubr5	100	88.993	ENSCJAG00000015960	UBR5	91	88.993	Callithrix_jacchus
ENSSDUG00000008072	ubr5	100	89.146	ENSCAFG00000000619	UBR5	100	89.043	Canis_familiaris
ENSSDUG00000008072	ubr5	100	89.037	ENSCAFG00020000901	UBR5	91	88.802	Canis_lupus_dingo
ENSSDUG00000008072	ubr5	100	88.950	ENSCHIG00000020937	UBR5	91	88.950	Capra_hircus
ENSSDUG00000008072	ubr5	100	89.238	ENSTSYG00000011411	UBR5	91	89.395	Carlito_syrichta
ENSSDUG00000008072	ubr5	100	81.715	ENSCPOG00000009637	UBR5	92	81.715	Cavia_porcellus
ENSSDUG00000008072	ubr5	100	89.067	ENSCCAG00000037120	UBR5	91	89.067	Cebus_capucinus
ENSSDUG00000008072	ubr5	100	89.002	ENSCATG00000035969	UBR5	91	89.002	Cercocebus_atys
ENSSDUG00000008072	ubr5	100	89.356	ENSCLAG00000005604	UBR5	92	89.146	Chinchilla_lanigera
ENSSDUG00000008072	ubr5	100	89.282	ENSCSAG00000011959	UBR5	91	89.282	Chlorocebus_sabaeus
ENSSDUG00000008072	ubr5	86	95.455	ENSCHOG00000013701	UBR5	79	95.455	Choloepus_hoffmanni
ENSSDUG00000008072	ubr5	100	88.911	ENSCPBG00000026166	UBR5	92	88.889	Chrysemys_picta_bellii
ENSSDUG00000008072	ubr5	51	40.882	ENSCING00000008630	-	91	40.759	Ciona_intestinalis
ENSSDUG00000008072	ubr5	100	89.072	ENSCANG00000041171	UBR5	100	87.187	Colobus_angolensis_palliatus
ENSSDUG00000008072	ubr5	97	100.000	ENSCGRG00001002960	Ubr5	91	83.327	Cricetulus_griseus_chok1gshd
ENSSDUG00000008072	ubr5	100	86.127	ENSCGRG00000005867	Ubr5	93	86.088	Cricetulus_griseus_crigri
ENSSDUG00000008072	ubr5	100	96.919	ENSCSEG00000008448	ubr5	89	96.505	Cynoglossus_semilaevis
ENSSDUG00000008072	ubr5	100	96.607	ENSCVAG00000021987	ubr5	100	96.607	Cyprinodon_variegatus
ENSSDUG00000008072	ubr5	100	94.584	ENSDARG00000018192	ubr5	91	94.623	Danio_rerio
ENSSDUG00000008072	ubr5	100	86.753	ENSDNOG00000007897	UBR5	91	86.557	Dasypus_novemcinctus
ENSSDUG00000008072	ubr5	100	88.719	ENSDORG00000007058	Ubr5	92	88.876	Dipodomys_ordii
ENSSDUG00000008072	ubr5	80	96.875	ENSETEG00000020339	UBR5	72	96.875	Echinops_telfairi
ENSSDUG00000008072	ubr5	100	88.958	ENSEASG00005001629	UBR5	91	89.076	Equus_asinus_asinus
ENSSDUG00000008072	ubr5	100	89.067	ENSECAG00000015755	UBR5	100	89.185	Equus_caballus
ENSSDUG00000008072	ubr5	100	96.258	ENSELUG00000005362	ubr5	100	96.258	Esox_lucius
ENSSDUG00000008072	ubr5	100	89.067	ENSFCAG00000011214	UBR5	91	89.067	Felis_catus
ENSSDUG00000008072	ubr5	100	89.474	ENSFALG00000005901	UBR5	91	89.592	Ficedula_albicollis
ENSSDUG00000008072	ubr5	100	88.911	ENSFDAG00000014793	UBR5	92	88.911	Fukomys_damarensis
ENSSDUG00000008072	ubr5	100	96.923	ENSFHEG00000019770	ubr5	100	96.923	Fundulus_heteroclitus
ENSSDUG00000008072	ubr5	100	96.304	ENSGMOG00000018440	ubr5	92	96.304	Gadus_morhua
ENSSDUG00000008072	ubr5	100	87.187	ENSGALG00000031282	UBR5	92	87.500	Gallus_gallus
ENSSDUG00000008072	ubr5	100	97.247	ENSGACG00000004642	ubr5	100	97.549	Gasterosteus_aculeatus
ENSSDUG00000008072	ubr5	100	88.806	ENSGGOG00000003058	UBR5	91	88.806	Gorilla_gorilla
ENSSDUG00000008072	ubr5	96	98.145	ENSHBUG00000021803	ubr5	100	98.145	Haplochromis_burtoni
ENSSDUG00000008072	ubr5	100	89.067	ENSHGLG00000010405	UBR5	91	89.067	Heterocephalus_glaber_female
ENSSDUG00000008072	ubr5	100	87.382	ENSHGLG00100004167	UBR5	91	87.226	Heterocephalus_glaber_male
ENSSDUG00000008072	ubr5	100	96.616	ENSHCOG00000014022	ubr5	100	96.616	Hippocampus_comes
ENSSDUG00000008072	ubr5	96	93.243	ENSIPUG00000023090	ubr5	100	93.284	Ictalurus_punctatus
ENSSDUG00000008072	ubr5	100	89.199	ENSSTOG00000005328	UBR5	91	89.199	Ictidomys_tridecemlineatus
ENSSDUG00000008072	ubr5	100	88.911	ENSJJAG00000013619	Ubr5	91	88.911	Jaculus_jaculus
ENSSDUG00000008072	ubr5	98	97.508	ENSKMAG00000001452	ubr5	91	97.508	Kryptolebias_marmoratus
ENSSDUG00000008072	ubr5	100	95.866	ENSLBEG00000024613	ubr5	91	95.866	Labrus_bergylta
ENSSDUG00000008072	ubr5	100	89.189	ENSLACG00000012137	UBR5	92	89.146	Latimeria_chalumnae
ENSSDUG00000008072	ubr5	100	92.703	ENSLOCG00000009882	ubr5	91	92.703	Lepisosteus_oculatus
ENSSDUG00000008072	ubr5	100	89.072	ENSMFAG00000044216	UBR5	91	89.072	Macaca_fascicularis
ENSSDUG00000008072	ubr5	100	89.356	ENSMMUG00000020766	UBR5	91	89.356	Macaca_mulatta
ENSSDUG00000008072	ubr5	100	89.033	ENSMNEG00000028834	UBR5	91	89.033	Macaca_nemestrina
ENSSDUG00000008072	ubr5	100	89.072	ENSMLEG00000039922	UBR5	100	87.716	Mandrillus_leucophaeus
ENSSDUG00000008072	ubr5	100	98.226	ENSMZEG00005025460	ubr5	100	98.226	Maylandia_zebra
ENSSDUG00000008072	ubr5	87	88.462	ENSMGAG00000012296	-	99	88.733	Meleagris_gallopavo
ENSSDUG00000008072	ubr5	100	88.401	ENSMAUG00000018902	Ubr5	91	88.401	Mesocricetus_auratus
ENSSDUG00000008072	ubr5	100	88.954	ENSMICG00000014824	UBR5	91	88.954	Microcebus_murinus
ENSSDUG00000008072	ubr5	100	88.597	ENSMOCG00000019809	Ubr5	92	88.597	Microtus_ochrogaster
ENSSDUG00000008072	ubr5	100	95.625	ENSMMOG00000018266	ubr5	100	95.625	Mola_mola
ENSSDUG00000008072	ubr5	100	88.680	ENSMODG00000005976	UBR5	92	88.758	Monodelphis_domestica
ENSSDUG00000008072	ubr5	100	97.165	ENSMALG00000008018	ubr5	100	97.165	Monopterus_albus
ENSSDUG00000008072	ubr5	100	88.440	MGP_CAROLIEiJ_G0019748	Ubr5	91	88.401	Mus_caroli
ENSSDUG00000008072	ubr5	100	88.767	ENSMUSG00000037487	Ubr5	91	88.727	Mus_musculus
ENSSDUG00000008072	ubr5	100	88.841	MGP_PahariEiJ_G0019757	Ubr5	91	88.841	Mus_pahari
ENSSDUG00000008072	ubr5	100	88.636	MGP_SPRETEiJ_G0020645	Ubr5	91	88.597	Mus_spretus
ENSSDUG00000008072	ubr5	100	89.277	ENSMPUG00000015136	UBR5	100	89.277	Mustela_putorius_furo
ENSSDUG00000008072	ubr5	100	88.915	ENSMLUG00000008052	UBR5	92	88.719	Myotis_lucifugus
ENSSDUG00000008072	ubr5	100	89.028	ENSNGAG00000001915	Ubr5	92	88.954	Nannospalax_galili
ENSSDUG00000008072	ubr5	96	97.451	ENSNBRG00000001982	ubr5	100	97.451	Neolamprologus_brichardi
ENSSDUG00000008072	ubr5	100	88.954	ENSNLEG00000003404	UBR5	92	88.954	Nomascus_leucogenys
ENSSDUG00000008072	ubr5	71	93.249	ENSMEUG00000004964	-	67	86.104	Notamacropus_eugenii
ENSSDUG00000008072	ubr5	81	98.639	ENSOPRG00000004459	UBR5	74	98.639	Ochotona_princeps
ENSSDUG00000008072	ubr5	100	89.028	ENSODEG00000001200	UBR5	91	89.028	Octodon_degus
ENSSDUG00000008072	ubr5	100	98.073	ENSONIG00000016431	ubr5	91	98.073	Oreochromis_niloticus
ENSSDUG00000008072	ubr5	100	89.356	ENSOANG00000013340	-	100	89.474	Ornithorhynchus_anatinus
ENSSDUG00000008072	ubr5	100	87.642	ENSOCUG00000008549	UBR5	90	87.642	Oryctolagus_cuniculus
ENSSDUG00000008072	ubr5	100	95.914	ENSORLG00000003009	ubr5	92	95.914	Oryzias_latipes
ENSSDUG00000008072	ubr5	100	97.009	ENSORLG00020022466	ubr5	100	97.009	Oryzias_latipes_hni
ENSSDUG00000008072	ubr5	100	96.973	ENSORLG00015012347	ubr5	90	96.973	Oryzias_latipes_hsok
ENSSDUG00000008072	ubr5	90	96.296	ENSOMEG00000014794	ubr5	90	96.296	Oryzias_melastigma
ENSSDUG00000008072	ubr5	100	88.797	ENSOGAG00000004491	UBR5	91	88.797	Otolemur_garnettii
ENSSDUG00000008072	ubr5	100	89.159	ENSOARG00000017554	UBR5	90	89.159	Ovis_aries
ENSSDUG00000008072	ubr5	100	87.299	ENSPPAG00000040534	UBR5	91	87.770	Pan_paniscus
ENSSDUG00000008072	ubr5	100	89.277	ENSPPRG00000001290	UBR5	92	89.277	Panthera_pardus
ENSSDUG00000008072	ubr5	100	88.440	ENSPTIG00000016223	UBR5	91	88.440	Panthera_tigris_altaica
ENSSDUG00000008072	ubr5	100	89.028	ENSPTRG00000020482	UBR5	91	89.028	Pan_troglodytes
ENSSDUG00000008072	ubr5	100	89.282	ENSPANG00000017236	UBR5	100	87.321	Papio_anubis
ENSSDUG00000008072	ubr5	100	86.260	ENSPKIG00000016015	UBR5	100	85.264	Paramormyrops_kingsleyae
ENSSDUG00000008072	ubr5	94	90.246	ENSPKIG00000005940	ubr5	99	89.895	Paramormyrops_kingsleyae
ENSSDUG00000008072	ubr5	100	88.854	ENSPSIG00000013244	UBR5	100	88.848	Pelodiscus_sinensis
ENSSDUG00000008072	ubr5	100	93.735	ENSPMGG00000022205	ubr5	91	93.735	Periophthalmus_magnuspinnatus
ENSSDUG00000008072	ubr5	100	88.793	ENSPEMG00000020823	Ubr5	91	88.793	Peromyscus_maniculatus_bairdii
ENSSDUG00000008072	ubr5	100	95.969	ENSPFOG00000012957	ubr5	100	95.969	Poecilia_formosa
ENSSDUG00000008072	ubr5	96	96.408	ENSPLAG00000008530	ubr5	100	96.408	Poecilia_latipinna
ENSSDUG00000008072	ubr5	96	95.413	ENSPMEG00000019322	ubr5	100	95.052	Poecilia_mexicana
ENSSDUG00000008072	ubr5	100	95.930	ENSPREG00000016584	ubr5	91	95.930	Poecilia_reticulata
ENSSDUG00000008072	ubr5	97	89.562	ENSPPYG00000018797	UBR5	92	89.616	Pongo_abelii
ENSSDUG00000008072	ubr5	79	89.868	ENSPCAG00000001160	UBR5	72	89.868	Procavia_capensis
ENSSDUG00000008072	ubr5	100	87.745	ENSPCOG00000014399	UBR5	91	87.745	Propithecus_coquereli
ENSSDUG00000008072	ubr5	89	98.639	ENSPVAG00000012646	UBR5	81	98.639	Pteropus_vampyrus
ENSSDUG00000008072	ubr5	96	97.822	ENSPNYG00000004164	ubr5	100	97.822	Pundamilia_nyererei
ENSSDUG00000008072	ubr5	100	93.031	ENSPNAG00000001318	ubr5	100	93.071	Pygocentrus_nattereri
ENSSDUG00000008072	ubr5	96	86.940	ENSRNOG00000006816	Ubr5	100	86.940	Rattus_norvegicus
ENSSDUG00000008072	ubr5	100	85.959	ENSRBIG00000038821	UBR5	100	86.289	Rhinopithecus_bieti
ENSSDUG00000008072	ubr5	100	88.056	ENSRROG00000040919	UBR5	92	88.017	Rhinopithecus_roxellana
ENSSDUG00000008072	ubr5	100	88.993	ENSSBOG00000025123	UBR5	91	88.993	Saimiri_boliviensis_boliviensis
ENSSDUG00000008072	ubr5	100	88.811	ENSSHAG00000017701	UBR5	91	88.693	Sarcophilus_harrisii
ENSSDUG00000008072	ubr5	100	91.913	ENSSFOG00015003412	ubr5	100	91.834	Scleropages_formosus
ENSSDUG00000008072	ubr5	100	96.686	ENSSMAG00000010194	ubr5	100	96.686	Scophthalmus_maximus
ENSSDUG00000008072	ubr5	100	99.960	ENSSLDG00000013014	ubr5	100	99.960	Seriola_lalandi_dorsalis
ENSSDUG00000008072	ubr5	91	95.455	ENSSARG00000000171	UBR5	83	95.455	Sorex_araneus
ENSSDUG00000008072	ubr5	100	97.718	ENSSPAG00000015131	ubr5	100	97.718	Stegastes_partitus
ENSSDUG00000008072	ubr5	100	89.277	ENSSSCG00000022479	UBR5	100	89.277	Sus_scrofa
ENSSDUG00000008072	ubr5	100	89.207	ENSTGUG00000012099	UBR5	92	89.325	Taeniopygia_guttata
ENSSDUG00000008072	ubr5	100	95.788	ENSTRUG00000010399	ubr5	100	95.788	Takifugu_rubripes
ENSSDUG00000008072	ubr5	100	92.009	ENSTNIG00000013292	ubr5	92	92.009	Tetraodon_nigroviridis
ENSSDUG00000008072	ubr5	88	100.000	ENSTBEG00000015656	UBR5	81	100.000	Tupaia_belangeri
ENSSDUG00000008072	ubr5	85	91.270	ENSTTRG00000000492	UBR5	78	91.270	Tursiops_truncatus
ENSSDUG00000008072	ubr5	100	88.740	ENSUMAG00000017960	UBR5	93	88.780	Ursus_maritimus
ENSSDUG00000008072	ubr5	90	100.000	ENSVPAG00000008376	UBR5	86	100.000	Vicugna_pacos
ENSSDUG00000008072	ubr5	100	89.037	ENSVVUG00000013461	UBR5	100	86.401	Vulpes_vulpes
ENSSDUG00000008072	ubr5	100	87.785	ENSXETG00000031995	UBR5	91	87.628	Xenopus_tropicalis
ENSSDUG00000008072	ubr5	83	100.000	ENSXCOG00000017034	ubr5	99	93.020	Xiphophorus_couchianus
ENSSDUG00000008072	ubr5	96	96.289	ENSXMAG00000002429	ubr5	100	96.289	Xiphophorus_maculatus