EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000008142 (Gene tree)
Gene ID: 111237373
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4513 bases
Position: chrBDQW01000853.1:357623-362135
Accession: 111237373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000011144	MRP-S27	PF10037.9	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000011353	-	2757	XM_022766449	ENSSDUP00000011144	399 (aa)	XP_022622170	-

Gene Model

Click here to download ENSSDUG00000008142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008142's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000008142	ptcd2	90	47.397	ENSG00000049883	PTCD2	100	42.857	Homo_sapiens
ENSSDUG00000008142	ptcd2	95	76.640	ENSAPOG00000020682	ptcd2	100	76.640	Acanthochromis_polyacanthus
ENSSDUG00000008142	ptcd2	87	47.262	ENSAMEG00000007194	PTCD2	89	47.262	Ailuropoda_melanoleuca
ENSSDUG00000008142	ptcd2	86	70.115	ENSACIG00000002053	ptcd2	100	70.115	Amphilophus_citrinellus
ENSSDUG00000008142	ptcd2	97	76.546	ENSAOCG00000006616	ptcd2	100	76.546	Amphiprion_ocellaris
ENSSDUG00000008142	ptcd2	97	76.289	ENSAPEG00000022926	ptcd2	100	76.289	Amphiprion_percula
ENSSDUG00000008142	ptcd2	96	47.520	ENSACAG00000009747	PTCD2	98	47.520	Anolis_carolinensis
ENSSDUG00000008142	ptcd2	91	45.623	ENSANAG00000029353	PTCD2	97	45.623	Aotus_nancymaae
ENSSDUG00000008142	ptcd2	97	78.866	ENSACLG00000027742	ptcd2	100	78.866	Astatotilapia_calliptera
ENSSDUG00000008142	ptcd2	89	51.541	ENSAMXG00000029404	ptcd2	95	51.541	Astyanax_mexicanus
ENSSDUG00000008142	ptcd2	87	48.415	ENSBTAG00000014675	PTCD2	90	48.415	Bos_taurus
ENSSDUG00000008142	ptcd2	91	44.828	ENSCJAG00000016364	PTCD2	97	44.828	Callithrix_jacchus
ENSSDUG00000008142	ptcd2	90	47.541	ENSCAFG00000007982	PTCD2	86	47.541	Canis_familiaris
ENSSDUG00000008142	ptcd2	86	48.844	ENSCAFG00020019147	PTCD2	97	48.844	Canis_lupus_dingo
ENSSDUG00000008142	ptcd2	87	48.127	ENSCHIG00000017118	PTCD2	90	48.127	Capra_hircus
ENSSDUG00000008142	ptcd2	89	45.283	ENSCPOG00000040168	PTCD2	97	45.283	Cavia_porcellus
ENSSDUG00000008142	ptcd2	73	47.351	ENSCCAG00000021996	-	93	47.351	Cebus_capucinus
ENSSDUG00000008142	ptcd2	91	45.889	ENSCCAG00000029389	-	97	45.889	Cebus_capucinus
ENSSDUG00000008142	ptcd2	93	47.594	ENSCATG00000019069	PTCD2	98	47.594	Cercocebus_atys
ENSSDUG00000008142	ptcd2	87	48.127	ENSCLAG00000000072	PTCD2	91	48.127	Chinchilla_lanigera
ENSSDUG00000008142	ptcd2	87	48.991	ENSCSAG00000015623	PTCD2	98	47.733	Chlorocebus_sabaeus
ENSSDUG00000008142	ptcd2	64	53.529	ENSCHOG00000010634	PTCD2	73	53.529	Choloepus_hoffmanni
ENSSDUG00000008142	ptcd2	97	47.436	ENSCPBG00000000216	PTCD2	100	47.436	Chrysemys_picta_bellii
ENSSDUG00000008142	ptcd2	90	48.219	ENSCANG00000035636	PTCD2	94	48.219	Colobus_angolensis_palliatus
ENSSDUG00000008142	ptcd2	89	47.956	ENSCGRG00001015289	Ptcd2	80	47.956	Cricetulus_griseus_chok1gshd
ENSSDUG00000008142	ptcd2	89	47.956	ENSCGRG00000006193	Ptcd2	80	47.956	Cricetulus_griseus_crigri
ENSSDUG00000008142	ptcd2	97	72.564	ENSCVAG00000001285	ptcd2	100	72.564	Cyprinodon_variegatus
ENSSDUG00000008142	ptcd2	91	54.545	ENSDARG00000035391	ptcd2	95	54.545	Danio_rerio
ENSSDUG00000008142	ptcd2	97	44.615	ENSDNOG00000008719	PTCD2	96	44.615	Dasypus_novemcinctus
ENSSDUG00000008142	ptcd2	87	50.144	ENSDORG00000004921	Ptcd2	90	50.144	Dipodomys_ordii
ENSSDUG00000008142	ptcd2	87	45.402	ENSETEG00000016542	PTCD2	89	45.402	Echinops_telfairi
ENSSDUG00000008142	ptcd2	92	46.032	ENSEASG00005018038	PTCD2	99	46.032	Equus_asinus_asinus
ENSSDUG00000008142	ptcd2	87	48.415	ENSECAG00000007022	PTCD2	89	48.415	Equus_caballus
ENSSDUG00000008142	ptcd2	91	46.575	ENSEEUG00000014031	PTCD2	94	46.575	Erinaceus_europaeus
ENSSDUG00000008142	ptcd2	95	63.446	ENSELUG00000003584	ptcd2	100	63.446	Esox_lucius
ENSSDUG00000008142	ptcd2	77	49.191	ENSFCAG00000045432	PTCD2	72	49.191	Felis_catus
ENSSDUG00000008142	ptcd2	82	45.566	ENSFALG00000010299	PTCD2	99	45.566	Ficedula_albicollis
ENSSDUG00000008142	ptcd2	91	45.676	ENSFDAG00000018461	PTCD2	97	45.676	Fukomys_damarensis
ENSSDUG00000008142	ptcd2	95	65.274	ENSGMOG00000003637	ptcd2	99	65.274	Gadus_morhua
ENSSDUG00000008142	ptcd2	87	45.402	ENSGALG00000038260	PTCD2	91	45.402	Gallus_gallus
ENSSDUG00000008142	ptcd2	97	49.487	ENSGAGG00000021952	PTCD2	100	49.487	Gopherus_agassizii
ENSSDUG00000008142	ptcd2	90	47.397	ENSGGOG00000010695	PTCD2	94	47.397	Gorilla_gorilla
ENSSDUG00000008142	ptcd2	97	78.351	ENSHBUG00000009191	ptcd2	100	78.351	Haplochromis_burtoni
ENSSDUG00000008142	ptcd2	87	48.415	ENSHGLG00000001234	PTCD2	91	48.415	Heterocephalus_glaber_female
ENSSDUG00000008142	ptcd2	87	48.415	ENSHGLG00100015419	PTCD2	91	48.415	Heterocephalus_glaber_male
ENSSDUG00000008142	ptcd2	93	68.883	ENSHCOG00000001703	ptcd2	98	68.883	Hippocampus_comes
ENSSDUG00000008142	ptcd2	82	61.774	ENSIPUG00000006080	ptcd2	90	61.808	Ictalurus_punctatus
ENSSDUG00000008142	ptcd2	87	48.000	ENSSTOG00000006596	PTCD2	91	48.000	Ictidomys_tridecemlineatus
ENSSDUG00000008142	ptcd2	87	48.703	ENSJJAG00000024388	Ptcd2	91	48.703	Jaculus_jaculus
ENSSDUG00000008142	ptcd2	95	63.351	ENSKMAG00000009329	ptcd2	99	63.351	Kryptolebias_marmoratus
ENSSDUG00000008142	ptcd2	97	71.392	ENSLBEG00000024871	ptcd2	99	71.392	Labrus_bergylta
ENSSDUG00000008142	ptcd2	95	54.427	ENSLOCG00000011122	ptcd2	100	54.427	Lepisosteus_oculatus
ENSSDUG00000008142	ptcd2	69	52.364	ENSLAFG00000004115	PTCD2	93	51.034	Loxodonta_africana
ENSSDUG00000008142	ptcd2	93	48.267	ENSMFAG00000031516	PTCD2	96	48.267	Macaca_fascicularis
ENSSDUG00000008142	ptcd2	93	48.000	ENSMNEG00000007537	PTCD2	98	48.000	Macaca_nemestrina
ENSSDUG00000008142	ptcd2	93	47.733	ENSMLEG00000031093	PTCD2	96	47.733	Mandrillus_leucophaeus
ENSSDUG00000008142	ptcd2	95	79.003	ENSMAMG00000018529	ptcd2	100	79.003	Mastacembelus_armatus
ENSSDUG00000008142	ptcd2	97	78.866	ENSMZEG00005003625	ptcd2	100	78.866	Maylandia_zebra
ENSSDUG00000008142	ptcd2	87	45.533	ENSMGAG00000005033	PTCD2	99	45.533	Meleagris_gallopavo
ENSSDUG00000008142	ptcd2	87	48.402	ENSMAUG00000020253	Ptcd2	90	38.920	Mesocricetus_auratus
ENSSDUG00000008142	ptcd2	87	47.564	ENSMICG00000004535	PTCD2	90	47.564	Microcebus_murinus
ENSSDUG00000008142	ptcd2	89	48.626	ENSMOCG00000019985	Ptcd2	96	48.626	Microtus_ochrogaster
ENSSDUG00000008142	ptcd2	89	46.779	ENSMODG00000001695	PTCD2	93	46.779	Monodelphis_domestica
ENSSDUG00000008142	ptcd2	95	80.315	ENSMALG00000022372	ptcd2	100	80.315	Monopterus_albus
ENSSDUG00000008142	ptcd2	89	47.527	MGP_CAROLIEiJ_G0018829	Ptcd2	96	47.527	Mus_caroli
ENSSDUG00000008142	ptcd2	89	46.429	ENSMUSG00000021650	Ptcd2	96	46.429	Mus_musculus
ENSSDUG00000008142	ptcd2	87	49.280	MGP_PahariEiJ_G0015904	Ptcd2	91	49.280	Mus_pahari
ENSSDUG00000008142	ptcd2	89	47.253	MGP_SPRETEiJ_G0019711	Ptcd2	96	47.253	Mus_spretus
ENSSDUG00000008142	ptcd2	87	47.839	ENSMPUG00000014401	PTCD2	91	47.839	Mustela_putorius_furo
ENSSDUG00000008142	ptcd2	87	46.974	ENSMLUG00000007374	PTCD2	99	44.703	Myotis_lucifugus
ENSSDUG00000008142	ptcd2	91	44.932	ENSNGAG00000005027	Ptcd2	95	44.932	Nannospalax_galili
ENSSDUG00000008142	ptcd2	82	75.988	ENSNBRG00000000092	-	100	75.988	Neolamprologus_brichardi
ENSSDUG00000008142	ptcd2	95	79.003	ENSNBRG00000008174	ptcd2	100	79.003	Neolamprologus_brichardi
ENSSDUG00000008142	ptcd2	90	47.397	ENSNLEG00000004516	PTCD2	94	47.397	Nomascus_leucogenys
ENSSDUG00000008142	ptcd2	54	61.350	ENSMEUG00000014012	-	58	59.302	Notamacropus_eugenii
ENSSDUG00000008142	ptcd2	87	47.262	ENSOPRG00000007290	PTCD2	89	47.262	Ochotona_princeps
ENSSDUG00000008142	ptcd2	90	47.283	ENSODEG00000016417	PTCD2	96	47.283	Octodon_degus
ENSSDUG00000008142	ptcd2	84	79.341	ENSONIG00000011269	ptcd2	98	79.341	Oreochromis_niloticus
ENSSDUG00000008142	ptcd2	87	48.991	ENSOCUG00000007970	PTCD2	91	48.991	Oryctolagus_cuniculus
ENSSDUG00000008142	ptcd2	97	69.744	ENSORLG00000003851	ptcd2	100	69.744	Oryzias_latipes
ENSSDUG00000008142	ptcd2	95	69.191	ENSORLG00020009823	ptcd2	100	69.191	Oryzias_latipes_hni
ENSSDUG00000008142	ptcd2	86	68.986	ENSORLG00015016777	ptcd2	99	68.986	Oryzias_latipes_hsok
ENSSDUG00000008142	ptcd2	99	68.593	ENSOMEG00000012396	ptcd2	97	68.593	Oryzias_melastigma
ENSSDUG00000008142	ptcd2	87	49.856	ENSOGAG00000008390	PTCD2	89	49.856	Otolemur_garnettii
ENSSDUG00000008142	ptcd2	87	48.127	ENSOARG00000005087	PTCD2	89	48.127	Ovis_aries
ENSSDUG00000008142	ptcd2	90	47.397	ENSPPAG00000028480	PTCD2	94	47.397	Pan_paniscus
ENSSDUG00000008142	ptcd2	92	45.910	ENSPTRG00000016968	PTCD2	98	45.910	Pan_troglodytes
ENSSDUG00000008142	ptcd2	86	49.275	ENSPANG00000006611	PTCD2	89	49.275	Papio_anubis
ENSSDUG00000008142	ptcd2	87	57.759	ENSPKIG00000019896	ptcd2	91	57.759	Paramormyrops_kingsleyae
ENSSDUG00000008142	ptcd2	78	52.733	ENSPSIG00000014559	PTCD2	96	52.733	Pelodiscus_sinensis
ENSSDUG00000008142	ptcd2	89	49.727	ENSPEMG00000000884	Ptcd2	96	49.727	Peromyscus_maniculatus_bairdii
ENSSDUG00000008142	ptcd2	90	48.485	ENSPCIG00000029047	PTCD2	94	48.485	Phascolarctos_cinereus
ENSSDUG00000008142	ptcd2	94	71.618	ENSPLAG00000010456	ptcd2	98	71.618	Poecilia_latipinna
ENSSDUG00000008142	ptcd2	94	72.533	ENSPREG00000021797	ptcd2	96	72.533	Poecilia_reticulata
ENSSDUG00000008142	ptcd2	90	41.644	ENSPPYG00000015543	PTCD2	93	41.644	Pongo_abelii
ENSSDUG00000008142	ptcd2	68	44.322	ENSPCAG00000006806	PTCD2	87	44.322	Procavia_capensis
ENSSDUG00000008142	ptcd2	87	48.415	ENSPVAG00000010935	PTCD2	89	48.415	Pteropus_vampyrus
ENSSDUG00000008142	ptcd2	97	78.608	ENSPNYG00000003122	ptcd2	100	78.608	Pundamilia_nyererei
ENSSDUG00000008142	ptcd2	95	64.062	ENSPNAG00000021490	ptcd2	100	64.062	Pygocentrus_nattereri
ENSSDUG00000008142	ptcd2	89	48.352	ENSRNOG00000028403	Ptcd2	96	48.352	Rattus_norvegicus
ENSSDUG00000008142	ptcd2	91	43.716	ENSRBIG00000032929	PTCD2	94	43.716	Rhinopithecus_bieti
ENSSDUG00000008142	ptcd2	91	48.361	ENSRROG00000000080	PTCD2	95	48.361	Rhinopithecus_roxellana
ENSSDUG00000008142	ptcd2	91	45.623	ENSSBOG00000018911	PTCD2	98	45.623	Saimiri_boliviensis_boliviensis
ENSSDUG00000008142	ptcd2	91	44.628	ENSSHAG00000003833	PTCD2	94	44.628	Sarcophilus_harrisii
ENSSDUG00000008142	ptcd2	95	52.727	ENSSFOG00015015415	ptcd2	100	52.727	Scleropages_formosus
ENSSDUG00000008142	ptcd2	95	69.531	ENSSMAG00000010350	ptcd2	100	69.531	Scophthalmus_maximus
ENSSDUG00000008142	ptcd2	95	98.688	ENSSLDG00000015284	ptcd2	100	98.688	Seriola_lalandi_dorsalis
ENSSDUG00000008142	ptcd2	68	43.956	ENSSARG00000004983	PTCD2	87	43.956	Sorex_araneus
ENSSDUG00000008142	ptcd2	88	48.169	ENSSPUG00000000176	PTCD2	88	48.169	Sphenodon_punctatus
ENSSDUG00000008142	ptcd2	97	69.072	ENSSPAG00000008591	ptcd2	100	69.072	Stegastes_partitus
ENSSDUG00000008142	ptcd2	90	48.087	ENSSSCG00000016975	PTCD2	86	48.087	Sus_scrofa
ENSSDUG00000008142	ptcd2	86	46.957	ENSTGUG00000005705	PTCD2	99	46.957	Taeniopygia_guttata
ENSSDUG00000008142	ptcd2	87	46.398	ENSTBEG00000016559	PTCD2	89	46.398	Tupaia_belangeri
ENSSDUG00000008142	ptcd2	87	48.844	ENSTTRG00000011851	PTCD2	89	48.844	Tursiops_truncatus
ENSSDUG00000008142	ptcd2	87	47.262	ENSUAMG00000007583	PTCD2	81	47.262	Ursus_americanus
ENSSDUG00000008142	ptcd2	91	46.301	ENSUMAG00000007666	PTCD2	95	46.301	Ursus_maritimus
ENSSDUG00000008142	ptcd2	87	47.262	ENSVPAG00000009597	PTCD2	89	47.262	Vicugna_pacos
ENSSDUG00000008142	ptcd2	87	48.703	ENSVVUG00000007299	-	91	48.703	Vulpes_vulpes
ENSSDUG00000008142	ptcd2	86	50.000	ENSXETG00000031652	PTCD2	91	50.000	Xenopus_tropicalis
ENSSDUG00000008142	ptcd2	99	69.095	ENSXMAG00000005940	ptcd2	95	69.250	Xiphophorus_maculatus