EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000008158 (Gene tree)
Gene ID: 111227100
Gene Symbol: tbl3
Alias: cey|zgc:101778
Full Name: transducin beta like 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 16753 bases
Position: chrBDQW01000169.1:1780317-1797069
Accession: 111227100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000011207	Utp13	PF08625.11	1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000011416	-	4612	XM_022752499	ENSSDUP00000011207	938 (aa)	XP_022608220	UPI000BBE64BC

Gene Model

Click here to download ENSSDUG00000008158's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008158's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000008158	tbl3	56	30.469	ENSSDUG00000022083	prpf4	52	30.469
ENSSDUG00000008158	tbl3	61	32.143	ENSSDUG00000014276	wdr3	53	31.308
ENSSDUG00000008158	tbl3	65	32.317	ENSSDUG00000020022	wdr5	94	31.206
ENSSDUG00000008158	tbl3	66	33.058	ENSSDUG00000023475	wdr61	89	33.621
ENSSDUG00000008158	tbl3	65	33.929	ENSSDUG00000019036	-	90	33.929

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000008158	tbl3	86	62.239	ENSG00000183751	TBL3	98	62.116	Homo_sapiens
ENSSDUG00000008158	tbl3	96	85.762	ENSAPOG00000021308	tbl3	95	85.984	Acanthochromis_polyacanthus
ENSSDUG00000008158	tbl3	85	61.923	ENSAMEG00000017654	TBL3	98	61.510	Ailuropoda_melanoleuca
ENSSDUG00000008158	tbl3	86	89.219	ENSACIG00000007459	tbl3	99	89.219	Amphilophus_citrinellus
ENSSDUG00000008158	tbl3	99	84.665	ENSAOCG00000000453	tbl3	98	84.989	Amphiprion_ocellaris
ENSSDUG00000008158	tbl3	86	88.724	ENSAPEG00000010228	tbl3	99	88.724	Amphiprion_percula
ENSSDUG00000008158	tbl3	100	88.191	ENSATEG00000024571	tbl3	100	88.204	Anabas_testudineus
ENSSDUG00000008158	tbl3	81	61.008	ENSAPLG00000008515	TBL3	99	60.444	Anas_platyrhynchos
ENSSDUG00000008158	tbl3	86	62.608	ENSANAG00000030472	TBL3	99	62.608	Aotus_nancymaae
ENSSDUG00000008158	tbl3	100	86.688	ENSACLG00000027954	tbl3	100	85.760	Astatotilapia_calliptera
ENSSDUG00000008158	tbl3	95	74.140	ENSAMXG00000042589	tbl3	96	74.140	Astyanax_mexicanus
ENSSDUG00000008158	tbl3	86	61.899	ENSBTAG00000020366	TBL3	97	61.899	Bos_taurus
ENSSDUG00000008158	tbl3	84	31.579	WBGene00013143	Y53C12B.1	98	31.579	Caenorhabditis_elegans
ENSSDUG00000008158	tbl3	86	62.685	ENSCJAG00000015245	TBL3	98	62.685	Callithrix_jacchus
ENSSDUG00000008158	tbl3	87	60.317	ENSCAFG00000019430	TBL3	98	66.300	Canis_familiaris
ENSSDUG00000008158	tbl3	87	60.465	ENSCAFG00020026321	TBL3	99	60.465	Canis_lupus_dingo
ENSSDUG00000008158	tbl3	86	62.022	ENSCHIG00000007747	TBL3	97	62.022	Capra_hircus
ENSSDUG00000008158	tbl3	86	62.069	ENSTSYG00000036142	TBL3	98	61.946	Carlito_syrichta
ENSSDUG00000008158	tbl3	86	57.869	ENSCAPG00000016762	TBL3	96	57.673	Cavia_aperea
ENSSDUG00000008158	tbl3	86	62.022	ENSCPOG00000005998	TBL3	98	61.823	Cavia_porcellus
ENSSDUG00000008158	tbl3	86	62.977	ENSCCAG00000034486	TBL3	98	62.977	Cebus_capucinus
ENSSDUG00000008158	tbl3	85	62.484	ENSCATG00000031298	TBL3	99	61.632	Cercocebus_atys
ENSSDUG00000008158	tbl3	86	61.899	ENSCLAG00000013342	TBL3	98	61.899	Chinchilla_lanigera
ENSSDUG00000008158	tbl3	85	62.236	ENSCSAG00000011191	TBL3	97	62.236	Chlorocebus_sabaeus
ENSSDUG00000008158	tbl3	86	67.450	ENSCPBG00000000253	TBL3	97	67.079	Chrysemys_picta_bellii
ENSSDUG00000008158	tbl3	86	46.239	ENSCING00000009521	-	99	46.239	Ciona_intestinalis
ENSSDUG00000008158	tbl3	85	62.609	ENSCANG00000031169	TBL3	97	62.609	Colobus_angolensis_palliatus
ENSSDUG00000008158	tbl3	86	62.022	ENSCGRG00001021817	Tbl3	98	61.899	Cricetulus_griseus_chok1gshd
ENSSDUG00000008158	tbl3	86	62.022	ENSCGRG00000013364	Tbl3	98	61.899	Cricetulus_griseus_crigri
ENSSDUG00000008158	tbl3	100	83.701	ENSCSEG00000015634	tbl3	99	85.864	Cynoglossus_semilaevis
ENSSDUG00000008158	tbl3	99	81.517	ENSCVAG00000002720	tbl3	99	85.733	Cyprinodon_variegatus
ENSSDUG00000008158	tbl3	88	66.748	ENSDARG00000052344	tbl3	95	64.171	Danio_rerio
ENSSDUG00000008158	tbl3	77	43.228	ENSDNOG00000019996	TBL3	98	55.740	Dasypus_novemcinctus
ENSSDUG00000008158	tbl3	85	63.046	ENSDORG00000007377	Tbl3	97	62.825	Dipodomys_ordii
ENSSDUG00000008158	tbl3	84	33.293	FBgn0033454	CG1671	98	33.293	Drosophila_melanogaster
ENSSDUG00000008158	tbl3	73	65.640	ENSETEG00000019403	TBL3	85	65.640	Echinops_telfairi
ENSSDUG00000008158	tbl3	88	54.567	ENSEBUG00000003526	tbl3	94	54.207	Eptatretus_burgeri
ENSSDUG00000008158	tbl3	86	61.529	ENSEASG00005004649	TBL3	98	61.529	Equus_asinus_asinus
ENSSDUG00000008158	tbl3	86	61.652	ENSECAG00000019299	TBL3	98	61.652	Equus_caballus
ENSSDUG00000008158	tbl3	67	67.965	ENSEEUG00000000761	-	61	66.736	Erinaceus_europaeus
ENSSDUG00000008158	tbl3	86	60.596	ENSELUG00000007394	tbl3	99	60.596	Esox_lucius
ENSSDUG00000008158	tbl3	86	62.346	ENSFCAG00000011740	TBL3	98	62.099	Felis_catus
ENSSDUG00000008158	tbl3	86	63.780	ENSFALG00000003409	TBL3	98	63.715	Ficedula_albicollis
ENSSDUG00000008158	tbl3	86	62.762	ENSFDAG00000007751	TBL3	98	62.762	Fukomys_damarensis
ENSSDUG00000008158	tbl3	99	84.222	ENSFHEG00000002234	tbl3	100	83.262	Fundulus_heteroclitus
ENSSDUG00000008158	tbl3	87	69.662	ENSGMOG00000011562	tbl3	100	78.818	Gadus_morhua
ENSSDUG00000008158	tbl3	87	63.835	ENSGALG00000005558	TBL3	99	64.078	Gallus_gallus
ENSSDUG00000008158	tbl3	99	82.303	ENSGAFG00000020165	tbl3	99	82.409	Gambusia_affinis
ENSSDUG00000008158	tbl3	100	83.706	ENSGACG00000011960	tbl3	99	88.561	Gasterosteus_aculeatus
ENSSDUG00000008158	tbl3	86	67.327	ENSGAGG00000024028	TBL3	97	67.079	Gopherus_agassizii
ENSSDUG00000008158	tbl3	86	62.239	ENSGGOG00000009378	TBL3	98	62.239	Gorilla_gorilla
ENSSDUG00000008158	tbl3	100	86.688	ENSHBUG00000011872	tbl3	100	85.760	Haplochromis_burtoni
ENSSDUG00000008158	tbl3	86	63.086	ENSHGLG00000002431	TBL3	98	62.963	Heterocephalus_glaber_female
ENSSDUG00000008158	tbl3	86	62.099	ENSHGLG00100012878	TBL3	98	61.975	Heterocephalus_glaber_male
ENSSDUG00000008158	tbl3	100	80.741	ENSHCOG00000016689	tbl3	100	80.952	Hippocampus_comes
ENSSDUG00000008158	tbl3	94	73.333	ENSIPUG00000003568	TBL3	93	74.194	Ictalurus_punctatus
ENSSDUG00000008158	tbl3	86	63.400	ENSSTOG00000012964	TBL3	98	63.275	Ictidomys_tridecemlineatus
ENSSDUG00000008158	tbl3	86	62.159	ENSJJAG00000004124	Tbl3	98	62.159	Jaculus_jaculus
ENSSDUG00000008158	tbl3	96	84.650	ENSKMAG00000020117	tbl3	99	85.917	Kryptolebias_marmoratus
ENSSDUG00000008158	tbl3	100	86.581	ENSLBEG00000026742	tbl3	100	87.114	Labrus_bergylta
ENSSDUG00000008158	tbl3	86	67.239	ENSLACG00000000615	TBL3	99	67.239	Latimeria_chalumnae
ENSSDUG00000008158	tbl3	94	71.510	ENSLOCG00000008853	tbl3	92	71.871	Lepisosteus_oculatus
ENSSDUG00000008158	tbl3	86	60.666	ENSLAFG00000004699	TBL3	98	60.666	Loxodonta_africana
ENSSDUG00000008158	tbl3	85	62.609	ENSMFAG00000030302	TBL3	97	62.609	Macaca_fascicularis
ENSSDUG00000008158	tbl3	85	62.484	ENSMMUG00000007943	TBL3	98	62.391	Macaca_mulatta
ENSSDUG00000008158	tbl3	85	62.484	ENSMNEG00000032603	TBL3	97	62.484	Macaca_nemestrina
ENSSDUG00000008158	tbl3	85	62.625	ENSMLEG00000043359	TBL3	98	62.625	Mandrillus_leucophaeus
ENSSDUG00000008158	tbl3	100	90.021	ENSMAMG00000023507	tbl3	100	89.809	Mastacembelus_armatus
ENSSDUG00000008158	tbl3	100	86.688	ENSMZEG00005000630	tbl3	100	85.760	Maylandia_zebra
ENSSDUG00000008158	tbl3	86	64.084	ENSMGAG00000005694	TBL3	98	64.286	Meleagris_gallopavo
ENSSDUG00000008158	tbl3	86	62.069	ENSMAUG00000008718	Tbl3	98	61.899	Mesocricetus_auratus
ENSSDUG00000008158	tbl3	86	62.269	ENSMICG00000012787	TBL3	87	62.010	Microcebus_murinus
ENSSDUG00000008158	tbl3	86	62.469	ENSMOCG00000019634	Tbl3	98	62.346	Microtus_ochrogaster
ENSSDUG00000008158	tbl3	99	83.067	ENSMMOG00000007551	tbl3	99	83.990	Mola_mola
ENSSDUG00000008158	tbl3	86	61.805	ENSMODG00000016091	TBL3	98	61.681	Monodelphis_domestica
ENSSDUG00000008158	tbl3	100	89.255	ENSMALG00000007013	tbl3	100	89.468	Monopterus_albus
ENSSDUG00000008158	tbl3	86	62.454	MGP_CAROLIEiJ_G0021199	Tbl3	98	62.022	Mus_caroli
ENSSDUG00000008158	tbl3	86	62.330	ENSMUSG00000040688	Tbl3	99	70.100	Mus_musculus
ENSSDUG00000008158	tbl3	86	62.454	MGP_PahariEiJ_G0023516	Tbl3	98	62.022	Mus_pahari
ENSSDUG00000008158	tbl3	86	62.206	MGP_SPRETEiJ_G0022110	Tbl3	100	70.100	Mus_spretus
ENSSDUG00000008158	tbl3	86	61.899	ENSMPUG00000015545	TBL3	98	61.652	Mustela_putorius_furo
ENSSDUG00000008158	tbl3	86	62.222	ENSMLUG00000011684	TBL3	98	62.222	Myotis_lucifugus
ENSSDUG00000008158	tbl3	86	60.961	ENSNGAG00000002428	Tbl3	98	60.789	Nannospalax_galili
ENSSDUG00000008158	tbl3	86	85.626	ENSNBRG00000003173	tbl3	98	85.626	Neolamprologus_brichardi
ENSSDUG00000008158	tbl3	86	61.870	ENSNLEG00000008889	TBL3	98	61.747	Nomascus_leucogenys
ENSSDUG00000008158	tbl3	80	47.494	ENSMEUG00000004011	TBL3	99	48.496	Notamacropus_eugenii
ENSSDUG00000008158	tbl3	83	60.411	ENSOPRG00000002527	-	95	60.411	Ochotona_princeps
ENSSDUG00000008158	tbl3	87	60.780	ENSODEG00000013930	TBL3	98	61.290	Octodon_degus
ENSSDUG00000008158	tbl3	100	86.489	ENSONIG00000002319	tbl3	98	89.441	Oreochromis_niloticus
ENSSDUG00000008158	tbl3	85	61.577	ENSOANG00000009819	TBL3	99	61.327	Ornithorhynchus_anatinus
ENSSDUG00000008158	tbl3	99	81.896	ENSORLG00000009312	tbl3	95	87.685	Oryzias_latipes
ENSSDUG00000008158	tbl3	99	81.789	ENSORLG00020017711	tbl3	95	87.562	Oryzias_latipes_hni
ENSSDUG00000008158	tbl3	99	81.789	ENSORLG00015007004	tbl3	95	83.946	Oryzias_latipes_hsok
ENSSDUG00000008158	tbl3	99	82.428	ENSOMEG00000012684	tbl3	97	85.714	Oryzias_melastigma
ENSSDUG00000008158	tbl3	86	60.666	ENSOGAG00000010104	TBL3	98	60.666	Otolemur_garnettii
ENSSDUG00000008158	tbl3	80	56.380	ENSOARG00000017059	TBL3	99	57.100	Ovis_aries
ENSSDUG00000008158	tbl3	86	61.993	ENSPPAG00000041939	TBL3	98	61.993	Pan_paniscus
ENSSDUG00000008158	tbl3	86	61.975	ENSPPRG00000000893	TBL3	98	61.728	Panthera_pardus
ENSSDUG00000008158	tbl3	85	65.180	ENSPTIG00000010377	TBL3	98	65.180	Panthera_tigris_altaica
ENSSDUG00000008158	tbl3	86	62.116	ENSPTRG00000007621	TBL3	98	62.116	Pan_troglodytes
ENSSDUG00000008158	tbl3	85	62.360	ENSPANG00000007024	TBL3	97	62.360	Papio_anubis
ENSSDUG00000008158	tbl3	90	71.953	ENSPKIG00000000136	tbl3	94	70.915	Paramormyrops_kingsleyae
ENSSDUG00000008158	tbl3	86	66.626	ENSPSIG00000013024	TBL3	98	66.626	Pelodiscus_sinensis
ENSSDUG00000008158	tbl3	85	85.375	ENSPMGG00000020660	tbl3	96	85.375	Periophthalmus_magnuspinnatus
ENSSDUG00000008158	tbl3	86	62.407	ENSPEMG00000009768	Tbl3	98	62.422	Peromyscus_maniculatus_bairdii
ENSSDUG00000008158	tbl3	78	55.571	ENSPMAG00000004860	tbl3	99	53.333	Petromyzon_marinus
ENSSDUG00000008158	tbl3	86	60.569	ENSPCIG00000021811	TBL3	98	60.123	Phascolarctos_cinereus
ENSSDUG00000008158	tbl3	99	81.983	ENSPFOG00000009834	tbl3	100	81.663	Poecilia_formosa
ENSSDUG00000008158	tbl3	99	82.090	ENSPLAG00000016437	tbl3	100	81.770	Poecilia_latipinna
ENSSDUG00000008158	tbl3	99	81.983	ENSPMEG00000019513	tbl3	100	81.663	Poecilia_mexicana
ENSSDUG00000008158	tbl3	86	61.993	ENSPPYG00000006977	TBL3	98	61.993	Pongo_abelii
ENSSDUG00000008158	tbl3	86	62.639	ENSPCOG00000019749	TBL3	97	62.639	Propithecus_coquereli
ENSSDUG00000008158	tbl3	85	62.562	ENSPVAG00000016710	TBL3	98	62.687	Pteropus_vampyrus
ENSSDUG00000008158	tbl3	85	80.730	ENSPNYG00000017137	tbl3	98	80.730	Pundamilia_nyererei
ENSSDUG00000008158	tbl3	89	76.969	ENSPNAG00000017527	tbl3	98	76.531	Pygocentrus_nattereri
ENSSDUG00000008158	tbl3	86	61.899	ENSRNOG00000013429	Tbl3	98	61.899	Rattus_norvegicus
ENSSDUG00000008158	tbl3	85	58.313	ENSRBIG00000032982	TBL3	97	58.313	Rhinopithecus_bieti
ENSSDUG00000008158	tbl3	85	62.236	ENSRROG00000026697	TBL3	97	62.236	Rhinopithecus_roxellana
ENSSDUG00000008158	tbl3	86	62.977	ENSSBOG00000013923	TBL3	98	62.977	Saimiri_boliviensis_boliviensis
ENSSDUG00000008158	tbl3	86	61.887	ENSSHAG00000015266	TBL3	98	61.840	Sarcophilus_harrisii
ENSSDUG00000008158	tbl3	95	70.267	ENSSFOG00015023537	tbl3	91	71.709	Scleropages_formosus
ENSSDUG00000008158	tbl3	100	89.765	ENSSMAG00000014338	tbl3	100	90.085	Scophthalmus_maximus
ENSSDUG00000008158	tbl3	100	98.827	ENSSLDG00000023733	tbl3	100	98.827	Seriola_lalandi_dorsalis
ENSSDUG00000008158	tbl3	85	67.718	ENSSPUG00000012939	TBL3	99	67.718	Sphenodon_punctatus
ENSSDUG00000008158	tbl3	100	86.688	ENSSPAG00000010659	tbl3	100	86.155	Stegastes_partitus
ENSSDUG00000008158	tbl3	86	65.042	ENSSSCG00000037686	TBL3	98	60.666	Sus_scrofa
ENSSDUG00000008158	tbl3	85	62.159	ENSTGUG00000006592	-	100	62.035	Taeniopygia_guttata
ENSSDUG00000008158	tbl3	96	81.707	ENSTRUG00000007010	tbl3	100	80.277	Takifugu_rubripes
ENSSDUG00000008158	tbl3	89	82.697	ENSTNIG00000018011	tbl3	99	83.128	Tetraodon_nigroviridis
ENSSDUG00000008158	tbl3	86	60.419	ENSTTRG00000011395	TBL3	98	60.419	Tursiops_truncatus
ENSSDUG00000008158	tbl3	85	62.065	ENSUAMG00000019276	TBL3	98	61.652	Ursus_americanus
ENSSDUG00000008158	tbl3	85	60.745	ENSUMAG00000022149	TBL3	96	60.345	Ursus_maritimus
ENSSDUG00000008158	tbl3	86	61.529	ENSVVUG00000009589	TBL3	98	61.282	Vulpes_vulpes
ENSSDUG00000008158	tbl3	86	61.077	ENSXETG00000007217	tbl3	97	60.832	Xenopus_tropicalis
ENSSDUG00000008158	tbl3	87	87.562	ENSXCOG00000010277	tbl3	99	87.562	Xiphophorus_couchianus
ENSSDUG00000008158	tbl3	99	82.253	ENSXMAG00000014866	tbl3	100	82.040	Xiphophorus_maculatus