EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000008181 (Gene tree)
Gene ID
111229971
Gene Symbol
cnot3a
Alias
fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name
CCR4-NOT transcription complex subunit 3
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Plus strand
Length
6940 bases
Position
chrBDQW01000258.1:1111334-1118273
Accession
111229971
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000011429Not3PF04065.151.8e-9711
ENSSDUP00000011401Not3PF04065.153.5e-9711
ENSSDUP00000011325Not3PF04065.153.9e-9311
ENSSDUP00000011429NOT2_3_5PF04153.186.1e-3911
ENSSDUP00000011401NOT2_3_5PF04153.182.6e-3811
ENSSDUP00000011325NOT2_3_5PF04153.184.2e-3711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000011538-2727XM_022756488ENSSDUP00000011325908 (aa)XP_022612209-
ENSSDUT00000011615-2553-ENSSDUP00000011401850 (aa)--
ENSSDUT00000011643-1773-ENSSDUP00000011429590 (aa)--
Gene Model
Click here to download ENSSDUG00000008181's gene model file
Pathways
Pathway IDPathway NameSource
sdu03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008181's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000008181cnot3a9394.444ENSSDUG00000003428cnot3b7494.444
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000008181cnot3a10085.551ENSG00000088038CNOT310094.330Homo_sapiens
ENSSDUG00000008181cnot3a8086.441ENSAPOG00000015002cnot3b7689.568Acanthochromis_polyacanthus
ENSSDUG00000008181cnot3a5999.578ENSAPOG00000015499CNOT38499.578Acanthochromis_polyacanthus
ENSSDUG00000008181cnot3a8985.932ENSAMEG00000004528CNOT37689.542Ailuropoda_melanoleuca
ENSSDUG00000008181cnot3a10099.573ENSACIG00000006635cnot3a10099.573Amphilophus_citrinellus
ENSSDUG00000008181cnot3a9971.865ENSACIG00000003652cnot3b8892.857Amphilophus_citrinellus
ENSSDUG00000008181cnot3a9672.881ENSAOCG00000018385-10068.257Amphiprion_ocellaris
ENSSDUG00000008181cnot3a9899.573ENSAOCG00000023769cnot3a9988.508Amphiprion_ocellaris
ENSSDUG00000008181cnot3a10095.547ENSAPEG00000006624cnot3a10090.690Amphiprion_percula
ENSSDUG00000008181cnot3a9686.498ENSAPEG00000002640cnot3b8692.558Amphiprion_percula
ENSSDUG00000008181cnot3a9294.872ENSATEG00000015777cnot3b7494.872Anabas_testudineus
ENSSDUG00000008181cnot3a10094.743ENSATEG00000022737cnot3a10093.209Anabas_testudineus
ENSSDUG00000008181cnot3a9385.171ENSACAG00000016085CNOT38889.542Anolis_carolinensis
ENSSDUG00000008181cnot3a10085.551ENSANAG00000025756CNOT37889.216Aotus_nancymaae
ENSSDUG00000008181cnot3a10095.547ENSACLG00000021136cnot3a10092.560Astatotilapia_calliptera
ENSSDUG00000008181cnot3a10088.550ENSACLG00000016702cnot3b6096.154Astatotilapia_calliptera
ENSSDUG00000008181cnot3a9895.089ENSAMXG00000009447cnot3b8194.872Astyanax_mexicanus
ENSSDUG00000008181cnot3a9897.436ENSAMXG00000012359cnot3a10073.019Astyanax_mexicanus
ENSSDUG00000008181cnot3a10085.551ENSBTAG00000014900CNOT37689.216Bos_taurus
ENSSDUG00000008181cnot3a7754.696WBGene00003826ntl-39652.332Caenorhabditis_elegans
ENSSDUG00000008181cnot3a10085.551ENSCJAG00000001094CNOT37589.216Callithrix_jacchus
ENSSDUG00000008181cnot3a8985.551ENSCAFG00000002699CNOT37589.216Canis_familiaris
ENSSDUG00000008181cnot3a8985.551ENSCAFG00020018359CNOT37589.216Canis_lupus_dingo
ENSSDUG00000008181cnot3a9483.206ENSCHIG00000015302CNOT37787.748Capra_hircus
ENSSDUG00000008181cnot3a10085.551ENSTSYG00000008058CNOT37689.216Carlito_syrichta
ENSSDUG00000008181cnot3a10085.551ENSCAPG00000009533CNOT37589.216Cavia_aperea
ENSSDUG00000008181cnot3a10085.551ENSCPOG00000020741CNOT37589.216Cavia_porcellus
ENSSDUG00000008181cnot3a10085.551ENSCCAG00000036290CNOT37889.216Cebus_capucinus
ENSSDUG00000008181cnot3a10085.551ENSCATG00000030324CNOT37589.216Cercocebus_atys
ENSSDUG00000008181cnot3a10085.551ENSCLAG00000003302CNOT310085.366Chinchilla_lanigera
ENSSDUG00000008181cnot3a10085.551ENSCSAG00000001900CNOT37589.216Chlorocebus_sabaeus
ENSSDUG00000008181cnot3a9785.932ENSCPBG00000011655CNOT37589.216Chrysemys_picta_bellii
ENSSDUG00000008181cnot3a10067.078ENSCING00000000293-7267.886Ciona_intestinalis
ENSSDUG00000008181cnot3a10085.551ENSCANG00000013408CNOT37589.216Colobus_angolensis_palliatus
ENSSDUG00000008181cnot3a8585.932ENSCGRG00001000855Cnot37589.542Cricetulus_griseus_chok1gshd
ENSSDUG00000008181cnot3a9349.650ENSCGRG00000012929Cnot37469.767Cricetulus_griseus_crigri
ENSSDUG00000008181cnot3a10094.332ENSCSEG00000003574cnot3a10092.549Cynoglossus_semilaevis
ENSSDUG00000008181cnot3a10083.969ENSCSEG00000016892cnot3b6389.831Cynoglossus_semilaevis
ENSSDUG00000008181cnot3a8393.694ENSCVAG00000022122cnot3b7691.453Cyprinodon_variegatus
ENSSDUG00000008181cnot3a10098.291ENSCVAG00000008168cnot3a10087.090Cyprinodon_variegatus
ENSSDUG00000008181cnot3a9394.872ENSDARG00000019842cnot3b7794.872Danio_rerio
ENSSDUG00000008181cnot3a10096.203ENSDARG00000007135cnot3a8597.009Danio_rerio
ENSSDUG00000008181cnot3a8985.551ENSDNOG00000045972CNOT37589.216Dasypus_novemcinctus
ENSSDUG00000008181cnot3a9385.551ENSDORG00000008021Cnot310080.460Dipodomys_ordii
ENSSDUG00000008181cnot3a6968.016FBgn0033029Not35066.667Drosophila_melanogaster
ENSSDUG00000008181cnot3a74100.000ENSETEG00000006305CNOT363100.000Echinops_telfairi
ENSSDUG00000008181cnot3a9773.764ENSEBUG00000010437cnot3a6279.149Eptatretus_burgeri
ENSSDUG00000008181cnot3a10085.551ENSEASG00005021591CNOT37589.216Equus_asinus_asinus
ENSSDUG00000008181cnot3a10085.551ENSECAG00000023181CNOT37589.216Equus_caballus
ENSSDUG00000008181cnot3a9995.726ENSELUG00000014743cnot3a10081.450Esox_lucius
ENSSDUG00000008181cnot3a9593.162ENSELUG00000000953cnot3b7593.162Esox_lucius
ENSSDUG00000008181cnot3a10085.551ENSFCAG00000014042CNOT37689.216Felis_catus
ENSSDUG00000008181cnot3a10097.890ENSFHEG00000023166cnot3a9799.153Fundulus_heteroclitus
ENSSDUG00000008181cnot3a8393.694ENSFHEG00000001696cnot3b5491.453Fundulus_heteroclitus
ENSSDUG00000008181cnot3a9089.474ENSGMOG00000005365cnot3a9879.075Gadus_morhua
ENSSDUG00000008181cnot3a7891.892ENSGAFG00000003459cnot3b5589.744Gambusia_affinis
ENSSDUG00000008181cnot3a10098.718ENSGAFG00000013094cnot3a10088.293Gambusia_affinis
ENSSDUG00000008181cnot3a9484.070ENSGACG00000011489cnot3a9883.837Gasterosteus_aculeatus
ENSSDUG00000008181cnot3a9962.639ENSGAGG00000012677CNOT38189.069Gopherus_agassizii
ENSSDUG00000008181cnot3a10085.551ENSGGOG00000012996CNOT37889.216Gorilla_gorilla
ENSSDUG00000008181cnot3a10095.547ENSHBUG00000005275cnot3a10092.670Haplochromis_burtoni
ENSSDUG00000008181cnot3a9690.566ENSHBUG00000019699cnot3b5090.566Haplochromis_burtoni
ENSSDUG00000008181cnot3a10085.551ENSHGLG00000008821CNOT310080.460Heterocephalus_glaber_female
ENSSDUG00000008181cnot3a8484.231ENSHGLG00100006181CNOT310080.460Heterocephalus_glaber_male
ENSSDUG00000008181cnot3a10099.573ENSHCOG00000020968cnot3a10087.595Hippocampus_comes
ENSSDUG00000008181cnot3a9995.299ENSIPUG00000009046cnot3b7295.299Ictalurus_punctatus
ENSSDUG00000008181cnot3a10092.593ENSIPUG00000000167cnot37195.299Ictalurus_punctatus
ENSSDUG00000008181cnot3a10085.551ENSSTOG00000028248CNOT37589.216Ictidomys_tridecemlineatus
ENSSDUG00000008181cnot3a8785.932ENSJJAG00000014594Cnot310080.460Jaculus_jaculus
ENSSDUG00000008181cnot3a10099.573ENSKMAG00000004863cnot3a10088.889Kryptolebias_marmoratus
ENSSDUG00000008181cnot3a10063.903ENSKMAG00000018723cnot3b6794.872Kryptolebias_marmoratus
ENSSDUG00000008181cnot3a7899.541ENSLBEG00000017296cnot3a6898.182Labrus_bergylta
ENSSDUG00000008181cnot3a9594.017ENSLBEG00000018278cnot3b7694.017Labrus_bergylta
ENSSDUG00000008181cnot3a9785.115ENSLACG00000009742CNOT38887.582Latimeria_chalumnae
ENSSDUG00000008181cnot3a7395.210ENSLOCG00000000005cnot3b7992.308Lepisosteus_oculatus
ENSSDUG00000008181cnot3a10084.470ENSLAFG00000022133CNOT36892.766Loxodonta_africana
ENSSDUG00000008181cnot3a10085.551ENSMFAG00000040073CNOT37589.216Macaca_fascicularis
ENSSDUG00000008181cnot3a9993.590ENSMMUG00000009698CNOT310095.098Macaca_mulatta
ENSSDUG00000008181cnot3a10085.551ENSMNEG00000036750CNOT37589.216Macaca_nemestrina
ENSSDUG00000008181cnot3a10085.551ENSMLEG00000036579CNOT37589.216Mandrillus_leucophaeus
ENSSDUG00000008181cnot3a9294.444ENSMAMG00000019357cnot3b7494.444Mastacembelus_armatus
ENSSDUG00000008181cnot3a10095.142ENSMAMG00000019397cnot3a10092.451Mastacembelus_armatus
ENSSDUG00000008181cnot3a10088.550ENSMZEG00005002466cnot3b6096.154Maylandia_zebra
ENSSDUG00000008181cnot3a10095.547ENSMZEG00005016304cnot3a10092.560Maylandia_zebra
ENSSDUG00000008181cnot3a10085.932ENSMAUG00000014996Cnot37589.542Mesocricetus_auratus
ENSSDUG00000008181cnot3a8985.551ENSMICG00000002370CNOT37589.216Microcebus_murinus
ENSSDUG00000008181cnot3a50100.000ENSMOCG00000013249Cnot363100.000Microtus_ochrogaster
ENSSDUG00000008181cnot3a10094.444ENSMMOG00000016446cnot3a10092.519Mola_mola
ENSSDUG00000008181cnot3a10070.588ENSMMOG00000013086cnot3b10071.154Mola_mola
ENSSDUG00000008181cnot3a8585.878ENSMODG00000004066CNOT36993.590Monodelphis_domestica
ENSSDUG00000008181cnot3a10094.332ENSMALG00000009204cnot3a10089.814Monopterus_albus
ENSSDUG00000008181cnot3a8383.137ENSMALG00000004936cnot3b7687.162Monopterus_albus
ENSSDUG00000008181cnot3a10085.932MGP_CAROLIEiJ_G0029095Cnot310098.000Mus_caroli
ENSSDUG00000008181cnot3a10085.932ENSMUSG00000035632Cnot310098.000Mus_musculus
ENSSDUG00000008181cnot3a10085.932MGP_PahariEiJ_G0020964Cnot310098.000Mus_pahari
ENSSDUG00000008181cnot3a10085.932MGP_SPRETEiJ_G0030148Cnot310098.000Mus_spretus
ENSSDUG00000008181cnot3a8985.551ENSMPUG00000010352CNOT37589.216Mustela_putorius_furo
ENSSDUG00000008181cnot3a8585.551ENSNGAG00000013266Cnot37289.216Nannospalax_galili
ENSSDUG00000008181cnot3a10095.547ENSNBRG00000002401cnot3a10090.591Neolamprologus_brichardi
ENSSDUG00000008181cnot3a9983.399ENSNBRG00000003336cnot3b8690.265Neolamprologus_brichardi
ENSSDUG00000008181cnot3a10085.551ENSNLEG00000006272CNOT36493.590Nomascus_leucogenys
ENSSDUG00000008181cnot3a53100.000ENSMEUG00000002952CNOT366100.000Notamacropus_eugenii
ENSSDUG00000008181cnot3a68100.000ENSOPRG00000001605-63100.000Ochotona_princeps
ENSSDUG00000008181cnot3a10085.551ENSODEG00000000705CNOT310088.608Octodon_degus
ENSSDUG00000008181cnot3a10095.547ENSONIG00000006568cnot3a10092.459Oreochromis_niloticus
ENSSDUG00000008181cnot3a10067.053ENSONIG00000007047cnot3b8195.726Oreochromis_niloticus
ENSSDUG00000008181cnot3a8985.551ENSOCUG00000007691CNOT37689.216Oryctolagus_cuniculus
ENSSDUG00000008181cnot3a6058.140ENSORLG00000005982cnot3b8494.068Oryzias_latipes
ENSSDUG00000008181cnot3a10095.142ENSORLG00000011174cnot3a10086.543Oryzias_latipes
ENSSDUG00000008181cnot3a10066.524ENSORLG00020005779cnot3b8494.068Oryzias_latipes_hni
ENSSDUG00000008181cnot3a10095.142ENSORLG00020008009cnot3a10087.322Oryzias_latipes_hni
ENSSDUG00000008181cnot3a10095.142ENSORLG00015013729cnot3a10086.980Oryzias_latipes_hsok
ENSSDUG00000008181cnot3a6058.961ENSORLG00015019021cnot3b8394.068Oryzias_latipes_hsok
ENSSDUG00000008181cnot3a10087.786ENSOMEG00000015557cnot3b8293.913Oryzias_melastigma
ENSSDUG00000008181cnot3a10095.142ENSOMEG00000010309cnot3a9296.887Oryzias_melastigma
ENSSDUG00000008181cnot3a10085.551ENSOGAG00000006945CNOT37589.216Otolemur_garnettii
ENSSDUG00000008181cnot3a7691.979ENSOARG00000002981CNOT36691.979Ovis_aries
ENSSDUG00000008181cnot3a10085.551ENSPPAG00000002748CNOT37889.216Pan_paniscus
ENSSDUG00000008181cnot3a10085.551ENSPPRG00000011705CNOT37689.216Panthera_pardus
ENSSDUG00000008181cnot3a10072.344ENSPTIG00000008781CNOT39689.333Panthera_tigris_altaica
ENSSDUG00000008181cnot3a10085.551ENSPTRG00000046717-7889.216Pan_troglodytes
ENSSDUG00000008181cnot3a10085.551ENSPTRG00000011444CNOT37889.216Pan_troglodytes
ENSSDUG00000008181cnot3a10085.551ENSPANG00000009375CNOT37589.216Papio_anubis
ENSSDUG00000008181cnot3a10088.123ENSPKIG00000011733CNOT38595.726Paramormyrops_kingsleyae
ENSSDUG00000008181cnot3a9395.299ENSPKIG00000015967-9895.319Paramormyrops_kingsleyae
ENSSDUG00000008181cnot3a50100.000ENSPMGG00000012037cnot3a59100.000Periophthalmus_magnuspinnatus
ENSSDUG00000008181cnot3a9785.950ENSPMGG00000022539cnot3b5993.925Periophthalmus_magnuspinnatus
ENSSDUG00000008181cnot3a10085.932ENSPEMG00000024185Cnot37589.542Peromyscus_maniculatus_bairdii
ENSSDUG00000008181cnot3a9985.171ENSPCIG00000023018CNOT39388.672Phascolarctos_cinereus
ENSSDUG00000008181cnot3a10098.718ENSPFOG00000008693cnot3a9295.395Poecilia_formosa
ENSSDUG00000008181cnot3a9691.892ENSPFOG00000007168cnot3b8190.129Poecilia_formosa
ENSSDUG00000008181cnot3a10098.718ENSPLAG00000013324cnot3a10088.293Poecilia_latipinna
ENSSDUG00000008181cnot3a9691.892ENSPLAG00000013457cnot3b8190.129Poecilia_latipinna
ENSSDUG00000008181cnot3a9691.892ENSPMEG00000010184cnot3b8190.129Poecilia_mexicana
ENSSDUG00000008181cnot3a10098.718ENSPMEG00000017718cnot3a10089.387Poecilia_mexicana
ENSSDUG00000008181cnot3a9284.444ENSPREG00000000662cnot3b7473.756Poecilia_reticulata
ENSSDUG00000008181cnot3a10098.291ENSPREG00000007592cnot3a9998.291Poecilia_reticulata
ENSSDUG00000008181cnot3a10085.171ENSPPYG00000010372CNOT37588.889Pongo_abelii
ENSSDUG00000008181cnot3a6491.525ENSPCAG00000011999CNOT35691.525Procavia_capensis
ENSSDUG00000008181cnot3a9485.878ENSPCOG00000017673CNOT37789.216Propithecus_coquereli
ENSSDUG00000008181cnot3a10085.115ENSPVAG00000015564CNOT37088.562Pteropus_vampyrus
ENSSDUG00000008181cnot3a9294.828ENSPNYG00000003358cnot3b5094.828Pundamilia_nyererei
ENSSDUG00000008181cnot3a10095.547ENSPNYG00000002282cnot3a10092.560Pundamilia_nyererei
ENSSDUG00000008181cnot3a10094.444ENSPNAG00000027459cnot3b8194.444Pygocentrus_nattereri
ENSSDUG00000008181cnot3a9997.009ENSPNAG00000017679cnot3a10074.545Pygocentrus_nattereri
ENSSDUG00000008181cnot3a10085.932ENSRNOG00000053234Cnot37589.542Rattus_norvegicus
ENSSDUG00000008181cnot3a10085.551ENSRBIG00000031025CNOT37589.216Rhinopithecus_bieti
ENSSDUG00000008181cnot3a10085.551ENSRROG00000003872CNOT37589.216Rhinopithecus_roxellana
ENSSDUG00000008181cnot3a10085.551ENSSBOG00000030268CNOT37889.216Saimiri_boliviensis_boliviensis
ENSSDUG00000008181cnot3a10087.356ENSSFOG00015000248cnot38294.872Scleropages_formosus
ENSSDUG00000008181cnot3a10095.726ENSSFOG00015019203-8195.726Scleropages_formosus
ENSSDUG00000008181cnot3a8093.590ENSSMAG00000016031cnot3b7593.590Scophthalmus_maximus
ENSSDUG00000008181cnot3a10094.737ENSSMAG00000013235cnot3a10092.935Scophthalmus_maximus
ENSSDUG00000008181cnot3a9394.444ENSSLDG00000014376cnot3b7494.444Seriola_lalandi_dorsalis
ENSSDUG00000008181cnot3a9698.639ENSSLDG00000014733cnot3a9998.639Seriola_lalandi_dorsalis
ENSSDUG00000008181cnot3a10085.551ENSSPUG00000008510CNOT38889.216Sphenodon_punctatus
ENSSDUG00000008181cnot3a9795.547ENSSPAG00000003858cnot3a9896.481Stegastes_partitus
ENSSDUG00000008181cnot3a10066.805ENSSPAG00000001429cnot3b7593.724Stegastes_partitus
ENSSDUG00000008181cnot3a10085.551ENSSSCG00000003264CNOT37589.216Sus_scrofa
ENSSDUG00000008181cnot3a9988.710ENSTRUG00000007248cnot3b7391.880Takifugu_rubripes
ENSSDUG00000008181cnot3a10093.927ENSTRUG00000015732cnot3a10090.153Takifugu_rubripes
ENSSDUG00000008181cnot3a8898.291ENSTNIG00000008082cnot3a10084.028Tetraodon_nigroviridis
ENSSDUG00000008181cnot3a7685.115ENSTNIG00000005663cnot3b5486.328Tetraodon_nigroviridis
ENSSDUG00000008181cnot3a5793.233ENSTBEG00000009620-5492.481Tupaia_belangeri
ENSSDUG00000008181cnot3a8985.932ENSUAMG00000005234CNOT37589.542Ursus_americanus
ENSSDUG00000008181cnot3a8494.017ENSUMAG00000010934CNOT39686.090Ursus_maritimus
ENSSDUG00000008181cnot3a9585.551ENSVVUG00000008239CNOT37489.216Vulpes_vulpes
ENSSDUG00000008181cnot3a8783.712ENSXETG00000003166cnot38888.424Xenopus_tropicalis
ENSSDUG00000008181cnot3a10098.718ENSXCOG00000019460cnot3a9798.305Xiphophorus_couchianus
ENSSDUG00000008181cnot3a7991.892ENSXCOG00000018976cnot3b6189.744Xiphophorus_couchianus
ENSSDUG00000008181cnot3a10098.718ENSXMAG00000012273cnot3a10085.886Xiphophorus_maculatus
ENSSDUG00000008181cnot3a8591.892ENSXMAG00000014176cnot3b8189.744Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us