EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000008360 (Gene tree)
Gene ID: 111229985
Gene Symbol: prpf31
Alias: zgc:66177
Full Name: pre-mRNA processing factor 31
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 6472 bases
Position: chrBDQW01000258.1:1138380-1144851
Accession: 111229985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000011531	Prp31_C	PF09785.9	5.3e-44	1	1
ENSSDUP00000011495	Prp31_C	PF09785.9	5.7e-44	1	1
ENSSDUP00000011495	Nop	PF01798.18	5.6e-83	1	1
ENSSDUP00000011531	Nop	PF01798.18	1.7e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000011710	-	2799	XM_022756511	ENSSDUP00000011495	508 (aa)	XP_022612232	UPI000BBECD24
ENSSDUT00000011746	-	1485	-	ENSSDUP00000011531	494 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000008360's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000008360	prpf31	93	84.017	ENSG00000105618	PRPF31	99	84.040	Homo_sapiens
ENSSDUG00000008360	prpf31	94	98.287	ENSAPOG00000020310	prpf31	100	97.694	Acanthochromis_polyacanthus
ENSSDUG00000008360	prpf31	93	83.369	ENSAMEG00000004502	PRPF31	99	84.040	Ailuropoda_melanoleuca
ENSSDUG00000008360	prpf31	100	97.441	ENSACIG00000006591	prpf31	100	97.441	Amphilophus_citrinellus
ENSSDUG00000008360	prpf31	100	96.386	ENSAOCG00000021333	prpf31	100	96.386	Amphiprion_ocellaris
ENSSDUG00000008360	prpf31	100	97.244	ENSAPEG00000008035	prpf31	100	97.244	Amphiprion_percula
ENSSDUG00000008360	prpf31	100	98.425	ENSATEG00000022705	prpf31	100	98.425	Anabas_testudineus
ENSSDUG00000008360	prpf31	94	85.106	ENSACAG00000016061	PRPF31	98	84.646	Anolis_carolinensis
ENSSDUG00000008360	prpf31	85	86.620	ENSANAG00000020822	PRPF31	98	89.781	Aotus_nancymaae
ENSSDUG00000008360	prpf31	100	97.244	ENSACLG00000021238	prpf31	100	97.244	Astatotilapia_calliptera
ENSSDUG00000008360	prpf31	99	92.292	ENSAMXG00000012329	prpf31	99	92.292	Astyanax_mexicanus
ENSSDUG00000008360	prpf31	93	84.233	ENSBTAG00000007757	PRPF31	99	84.242	Bos_taurus
ENSSDUG00000008360	prpf31	95	45.643	WBGene00022458	prp-31	99	44.862	Caenorhabditis_elegans
ENSSDUG00000008360	prpf31	93	84.017	ENSCJAG00000018525	PRPF31	99	84.040	Callithrix_jacchus
ENSSDUG00000008360	prpf31	93	84.233	ENSCAFG00000002700	PRPF31	99	84.242	Canis_familiaris
ENSSDUG00000008360	prpf31	93	84.233	ENSCAFG00020018376	PRPF31	99	84.242	Canis_lupus_dingo
ENSSDUG00000008360	prpf31	93	80.994	ENSCHIG00000021020	PRPF31	99	81.212	Capra_hircus
ENSSDUG00000008360	prpf31	93	85.313	ENSTSYG00000013569	PRPF31	99	84.242	Carlito_syrichta
ENSSDUG00000008360	prpf31	93	84.233	ENSCAPG00000013797	PRPF31	99	84.242	Cavia_aperea
ENSSDUG00000008360	prpf31	93	84.233	ENSCPOG00000011507	PRPF31	99	84.242	Cavia_porcellus
ENSSDUG00000008360	prpf31	93	84.017	ENSCCAG00000020552	-	99	84.040	Cebus_capucinus
ENSSDUG00000008360	prpf31	89	78.492	ENSCCAG00000022236	-	96	78.492	Cebus_capucinus
ENSSDUG00000008360	prpf31	93	85.097	ENSCATG00000006020	PRPF31	99	84.040	Cercocebus_atys
ENSSDUG00000008360	prpf31	93	84.233	ENSCLAG00000001700	PRPF31	99	84.242	Chinchilla_lanigera
ENSSDUG00000008360	prpf31	93	84.017	ENSCSAG00000001903	PRPF31	99	84.040	Chlorocebus_sabaeus
ENSSDUG00000008360	prpf31	87	87.844	ENSCPBG00000011670	PRPF31	90	88.303	Chrysemys_picta_bellii
ENSSDUG00000008360	prpf31	99	62.598	ENSCSAVG00000010862	-	94	62.451	Ciona_savignyi
ENSSDUG00000008360	prpf31	93	84.233	ENSCANG00000029967	PRPF31	99	84.242	Colobus_angolensis_palliatus
ENSSDUG00000008360	prpf31	93	85.097	ENSCGRG00001004873	Prpf31	99	84.040	Cricetulus_griseus_chok1gshd
ENSSDUG00000008360	prpf31	93	85.033	ENSCGRG00000012910	Prpf31	99	85.466	Cricetulus_griseus_crigri
ENSSDUG00000008360	prpf31	100	95.669	ENSCSEG00000018961	prpf31	100	94.882	Cynoglossus_semilaevis
ENSSDUG00000008360	prpf31	100	96.850	ENSCVAG00000000226	prpf31	100	96.850	Cyprinodon_variegatus
ENSSDUG00000008360	prpf31	99	92.871	ENSDARG00000095904	prpf31	99	92.871	Danio_rerio
ENSSDUG00000008360	prpf31	93	84.017	ENSDNOG00000032884	PRPF31	98	84.040	Dasypus_novemcinctus
ENSSDUG00000008360	prpf31	93	84.416	ENSDORG00000008022	Prpf31	99	84.242	Dipodomys_ordii
ENSSDUG00000008360	prpf31	99	59.839	FBgn0036487	Prp31	99	59.839	Drosophila_melanogaster
ENSSDUG00000008360	prpf31	79	90.909	ENSETEG00000017891	PRPF31	85	90.909	Echinops_telfairi
ENSSDUG00000008360	prpf31	77	55.325	ENSEBUG00000004819	prpf31	91	54.805	Eptatretus_burgeri
ENSSDUG00000008360	prpf31	93	84.233	ENSEASG00005021593	PRPF31	99	84.242	Equus_asinus_asinus
ENSSDUG00000008360	prpf31	93	84.233	ENSECAG00000020667	PRPF31	99	84.242	Equus_caballus
ENSSDUG00000008360	prpf31	76	81.963	ENSEEUG00000006128	PRPF31	98	82.493	Erinaceus_europaeus
ENSSDUG00000008360	prpf31	99	91.650	ENSELUG00000014820	prpf31	99	91.618	Esox_lucius
ENSSDUG00000008360	prpf31	93	84.233	ENSFCAG00000014037	PRPF31	99	84.242	Felis_catus
ENSSDUG00000008360	prpf31	93	84.449	ENSFDAG00000011961	PRPF31	99	84.444	Fukomys_damarensis
ENSSDUG00000008360	prpf31	84	97.802	ENSFHEG00000003642	prpf31	74	96.154	Fundulus_heteroclitus
ENSSDUG00000008360	prpf31	99	89.901	ENSGMOG00000005345	prpf31	98	89.901	Gadus_morhua
ENSSDUG00000008360	prpf31	99	97.228	ENSGAFG00000013128	prpf31	100	97.228	Gambusia_affinis
ENSSDUG00000008360	prpf31	99	94.872	ENSGACG00000011464	prpf31	99	94.872	Gasterosteus_aculeatus
ENSSDUG00000008360	prpf31	94	85.075	ENSGAGG00000000670	PRPF31	98	84.242	Gopherus_agassizii
ENSSDUG00000008360	prpf31	93	84.017	ENSGGOG00000016516	PRPF31	99	84.040	Gorilla_gorilla
ENSSDUG00000008360	prpf31	100	97.441	ENSHBUG00000005311	prpf31	100	97.441	Haplochromis_burtoni
ENSSDUG00000008360	prpf31	93	84.233	ENSHGLG00000010504	PRPF31	99	84.040	Heterocephalus_glaber_female
ENSSDUG00000008360	prpf31	93	72.354	ENSHGLG00100005911	PRPF31	98	72.727	Heterocephalus_glaber_male
ENSSDUG00000008360	prpf31	99	95.661	ENSHCOG00000020890	prpf31	99	95.661	Hippocampus_comes
ENSSDUG00000008360	prpf31	99	90.693	ENSIPUG00000000171	prpf31	99	90.335	Ictalurus_punctatus
ENSSDUG00000008360	prpf31	93	84.017	ENSSTOG00000001287	PRPF31	99	84.040	Ictidomys_tridecemlineatus
ENSSDUG00000008360	prpf31	93	84.233	ENSJJAG00000015594	Prpf31	99	84.242	Jaculus_jaculus
ENSSDUG00000008360	prpf31	99	97.041	ENSKMAG00000004967	prpf31	100	97.041	Kryptolebias_marmoratus
ENSSDUG00000008360	prpf31	100	96.654	ENSLBEG00000017225	prpf31	100	96.654	Labrus_bergylta
ENSSDUG00000008360	prpf31	93	78.448	ENSLACG00000009449	PRPF31	99	77.688	Latimeria_chalumnae
ENSSDUG00000008360	prpf31	99	83.946	ENSLOCG00000000007	prpf31	99	84.139	Lepisosteus_oculatus
ENSSDUG00000008360	prpf31	93	84.233	ENSLAFG00000004559	PRPF31	99	84.242	Loxodonta_africana
ENSSDUG00000008360	prpf31	93	84.017	ENSMFAG00000001108	PRPF31	99	84.040	Macaca_fascicularis
ENSSDUG00000008360	prpf31	93	84.017	ENSMMUG00000022297	PRPF31	99	84.040	Macaca_mulatta
ENSSDUG00000008360	prpf31	93	84.017	ENSMNEG00000035943	PRPF31	99	84.040	Macaca_nemestrina
ENSSDUG00000008360	prpf31	93	84.017	ENSMLEG00000031953	PRPF31	99	84.040	Mandrillus_leucophaeus
ENSSDUG00000008360	prpf31	100	96.850	ENSMAMG00000019433	prpf31	100	96.850	Mastacembelus_armatus
ENSSDUG00000008360	prpf31	100	97.244	ENSMZEG00005016314	prpf31	100	97.244	Maylandia_zebra
ENSSDUG00000008360	prpf31	93	85.097	ENSMAUG00000011581	Prpf31	99	84.040	Mesocricetus_auratus
ENSSDUG00000008360	prpf31	93	84.449	ENSMICG00000002355	PRPF31	99	84.444	Microcebus_murinus
ENSSDUG00000008360	prpf31	93	85.097	ENSMOCG00000002128	Prpf31	99	84.040	Microtus_ochrogaster
ENSSDUG00000008360	prpf31	100	97.047	ENSMMOG00000016451	prpf31	100	97.047	Mola_mola
ENSSDUG00000008360	prpf31	93	84.416	ENSMODG00000004098	PRPF31	99	84.040	Monodelphis_domestica
ENSSDUG00000008360	prpf31	100	95.382	ENSMALG00000009251	prpf31	100	95.181	Monopterus_albus
ENSSDUG00000008360	prpf31	93	85.097	MGP_CAROLIEiJ_G0029094	Prpf31	99	84.040	Mus_caroli
ENSSDUG00000008360	prpf31	93	84.881	ENSMUSG00000008373	Prpf31	99	83.838	Mus_musculus
ENSSDUG00000008360	prpf31	93	84.881	MGP_PahariEiJ_G0020963	Prpf31	99	83.838	Mus_pahari
ENSSDUG00000008360	prpf31	93	85.097	MGP_SPRETEiJ_G0030147	Prpf31	99	84.040	Mus_spretus
ENSSDUG00000008360	prpf31	93	84.233	ENSMPUG00000010341	PRPF31	99	84.242	Mustela_putorius_furo
ENSSDUG00000008360	prpf31	99	81.542	ENSMLUG00000016862	PRPF31	98	82.759	Myotis_lucifugus
ENSSDUG00000008360	prpf31	93	85.065	ENSNGAG00000024131	Prpf31	99	83.838	Nannospalax_galili
ENSSDUG00000008360	prpf31	100	97.047	ENSNBRG00000002354	prpf31	100	97.047	Neolamprologus_brichardi
ENSSDUG00000008360	prpf31	83	80.387	ENSNLEG00000006261	-	98	72.929	Nomascus_leucogenys
ENSSDUG00000008360	prpf31	78	78.030	ENSMEUG00000002943	PRPF31	100	76.636	Notamacropus_eugenii
ENSSDUG00000008360	prpf31	57	88.927	ENSOPRG00000000055	PRPF31	100	88.927	Ochotona_princeps
ENSSDUG00000008360	prpf31	93	84.233	ENSODEG00000000855	PRPF31	99	84.242	Octodon_degus
ENSSDUG00000008360	prpf31	100	97.047	ENSONIG00000006574	prpf31	100	97.047	Oreochromis_niloticus
ENSSDUG00000008360	prpf31	81	62.319	ENSOANG00000009386	-	95	64.778	Ornithorhynchus_anatinus
ENSSDUG00000008360	prpf31	93	77.706	ENSOCUG00000002027	PRPF31	98	77.328	Oryctolagus_cuniculus
ENSSDUG00000008360	prpf31	99	96.252	ENSORLG00000011189	prpf31	99	96.252	Oryzias_latipes
ENSSDUG00000008360	prpf31	99	96.252	ENSORLG00020007965	prpf31	99	96.252	Oryzias_latipes_hni
ENSSDUG00000008360	prpf31	99	96.252	ENSORLG00015013676	prpf31	99	96.252	Oryzias_latipes_hsok
ENSSDUG00000008360	prpf31	99	96.647	ENSOMEG00000010384	prpf31	99	96.647	Oryzias_melastigma
ENSSDUG00000008360	prpf31	61	91.000	ENSOGAG00000006936	PRPF31	98	91.000	Otolemur_garnettii
ENSSDUG00000008360	prpf31	93	72.786	ENSOARG00000003033	PRPF31	97	70.303	Ovis_aries
ENSSDUG00000008360	prpf31	93	84.017	ENSPPAG00000032209	PRPF31	99	84.040	Pan_paniscus
ENSSDUG00000008360	prpf31	93	84.233	ENSPPRG00000011686	PRPF31	99	84.242	Panthera_pardus
ENSSDUG00000008360	prpf31	93	84.233	ENSPTIG00000008467	PRPF31	99	84.242	Panthera_tigris_altaica
ENSSDUG00000008360	prpf31	93	84.017	ENSPTRG00000045480	-	99	84.040	Pan_troglodytes
ENSSDUG00000008360	prpf31	93	84.017	ENSPTRG00000011443	PRPF31	99	84.040	Pan_troglodytes
ENSSDUG00000008360	prpf31	93	84.017	ENSPANG00000025402	PRPF31	99	84.040	Papio_anubis
ENSSDUG00000008360	prpf31	99	90.748	ENSPKIG00000011812	prpf31	99	90.945	Paramormyrops_kingsleyae
ENSSDUG00000008360	prpf31	61	92.409	ENSPSIG00000003405	PRPF31	96	91.083	Pelodiscus_sinensis
ENSSDUG00000008360	prpf31	93	80.603	ENSPEMG00000011678	Prpf31	99	79.839	Peromyscus_maniculatus_bairdii
ENSSDUG00000008360	prpf31	93	84.416	ENSPCIG00000014820	PRPF31	99	84.040	Phascolarctos_cinereus
ENSSDUG00000008360	prpf31	100	96.260	ENSPFOG00000008822	prpf31	100	96.260	Poecilia_formosa
ENSSDUG00000008360	prpf31	100	96.063	ENSPLAG00000013314	prpf31	100	96.063	Poecilia_latipinna
ENSSDUG00000008360	prpf31	100	96.457	ENSPMEG00000017707	prpf31	100	96.457	Poecilia_mexicana
ENSSDUG00000008360	prpf31	100	97.047	ENSPREG00000007764	prpf31	100	97.047	Poecilia_reticulata
ENSSDUG00000008360	prpf31	93	84.017	ENSPPYG00000010371	PRPF31	99	84.040	Pongo_abelii
ENSSDUG00000008360	prpf31	91	61.555	ENSPCAG00000011872	PRPF31	99	61.616	Procavia_capensis
ENSSDUG00000008360	prpf31	93	84.017	ENSPCOG00000020393	PRPF31	99	84.040	Propithecus_coquereli
ENSSDUG00000008360	prpf31	93	83.801	ENSPVAG00000015562	PRPF31	99	83.838	Pteropus_vampyrus
ENSSDUG00000008360	prpf31	100	97.244	ENSPNYG00000002232	prpf31	100	97.244	Pundamilia_nyererei
ENSSDUG00000008360	prpf31	99	90.909	ENSPNAG00000003485	prpf31	99	90.909	Pygocentrus_nattereri
ENSSDUG00000008360	prpf31	93	85.097	ENSRNOG00000061039	Prpf31	99	84.040	Rattus_norvegicus
ENSSDUG00000008360	prpf31	93	84.233	ENSRBIG00000034963	PRPF31	99	84.242	Rhinopithecus_bieti
ENSSDUG00000008360	prpf31	93	84.233	ENSRROG00000038740	PRPF31	99	84.242	Rhinopithecus_roxellana
ENSSDUG00000008360	prpf31	67	30.919	YGR091W	-	73	30.919	Saccharomyces_cerevisiae
ENSSDUG00000008360	prpf31	93	84.017	ENSSBOG00000028915	PRPF31	99	84.040	Saimiri_boliviensis_boliviensis
ENSSDUG00000008360	prpf31	93	84.416	ENSSHAG00000009065	PRPF31	99	84.040	Sarcophilus_harrisii
ENSSDUG00000008360	prpf31	99	91.159	ENSSFOG00015000288	prpf31	99	91.552	Scleropages_formosus
ENSSDUG00000008360	prpf31	99	97.633	ENSSMAG00000013211	prpf31	99	97.633	Scophthalmus_maximus
ENSSDUG00000008360	prpf31	100	90.551	ENSSLDG00000002851	prpf31	100	90.945	Seriola_lalandi_dorsalis
ENSSDUG00000008360	prpf31	94	84.255	ENSSPUG00000008622	PRPF31	98	83.636	Sphenodon_punctatus
ENSSDUG00000008360	prpf31	100	92.523	ENSSPAG00000022547	prpf31	100	92.523	Stegastes_partitus
ENSSDUG00000008360	prpf31	93	84.449	ENSSSCG00000003263	PRPF31	99	83.434	Sus_scrofa
ENSSDUG00000008360	prpf31	100	95.472	ENSTRUG00000015769	prpf31	100	95.472	Takifugu_rubripes
ENSSDUG00000008360	prpf31	99	96.450	ENSTNIG00000008083	prpf31	99	96.450	Tetraodon_nigroviridis
ENSSDUG00000008360	prpf31	93	73.913	ENSTTRG00000006566	PRPF31	99	73.780	Tursiops_truncatus
ENSSDUG00000008360	prpf31	93	84.233	ENSUAMG00000005241	PRPF31	99	84.242	Ursus_americanus
ENSSDUG00000008360	prpf31	93	84.233	ENSUMAG00000011212	PRPF31	99	84.242	Ursus_maritimus
ENSSDUG00000008360	prpf31	93	84.233	ENSVVUG00000008257	PRPF31	99	84.242	Vulpes_vulpes
ENSSDUG00000008360	prpf31	93	86.797	ENSXETG00000010916	prpf31	99	84.646	Xenopus_tropicalis
ENSSDUG00000008360	prpf31	99	96.364	ENSXCOG00000019456	prpf31	100	96.364	Xiphophorus_couchianus
ENSSDUG00000008360	prpf31	99	96.832	ENSXMAG00000012272	prpf31	100	96.832	Xiphophorus_maculatus