EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000008402 (Gene tree)
Gene ID: 111220881
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7404 bases
Position: chrBDQW01000078.1:196106-203509
Accession: 111220881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000011511	RRM_1	PF00076.22	5.3e-30	1	2
ENSSDUP00000011511	RRM_1	PF00076.22	5.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000011726	-	2460	XM_022744145	ENSSDUP00000011511	641 (aa)	XP_022599866	UPI000BBF0748

Gene Model

Click here to download ENSSDUG00000008402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000008402	sfpq	63	58.010	ENSSDUG00000021886	nono	92	55.765
ENSSDUG00000008402	sfpq	60	59.158	ENSSDUG00000010651	pspc1	74	59.804

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000008402	sfpq	65	78.291	ENSG00000116560	SFPQ	97	70.833	Homo_sapiens
ENSSDUG00000008402	sfpq	73	85.867	ENSAPOG00000024257	sfpq	100	79.740	Acanthochromis_polyacanthus
ENSSDUG00000008402	sfpq	65	78.291	ENSAMEG00000000815	SFPQ	98	76.389	Ailuropoda_melanoleuca
ENSSDUG00000008402	sfpq	100	79.507	ENSACIG00000000905	sfpq	100	79.012	Amphilophus_citrinellus
ENSSDUG00000008402	sfpq	74	85.263	ENSAOCG00000002889	sfpq	100	76.945	Amphiprion_ocellaris
ENSSDUG00000008402	sfpq	74	85.263	ENSAPEG00000016556	sfpq	100	76.945	Amphiprion_percula
ENSSDUG00000008402	sfpq	100	85.736	ENSATEG00000002981	sfpq	100	85.957	Anabas_testudineus
ENSSDUG00000008402	sfpq	52	59.143	ENSANAG00000037798	-	99	56.734	Aotus_nancymaae
ENSSDUG00000008402	sfpq	61	69.853	ENSANAG00000027438	-	70	59.562	Aotus_nancymaae
ENSSDUG00000008402	sfpq	52	56.056	ENSANAG00000021268	-	100	51.558	Aotus_nancymaae
ENSSDUG00000008402	sfpq	100	79.764	ENSACLG00000022332	sfpq	100	79.173	Astatotilapia_calliptera
ENSSDUG00000008402	sfpq	69	79.510	ENSAMXG00000011538	sfpq	68	79.955	Astyanax_mexicanus
ENSSDUG00000008402	sfpq	65	78.291	ENSBTAG00000016328	SFPQ	75	67.173	Bos_taurus
ENSSDUG00000008402	sfpq	65	73.380	ENSCAFG00000017608	-	63	71.759	Canis_familiaris
ENSSDUG00000008402	sfpq	65	78.291	ENSCAFG00000003595	-	66	76.389	Canis_familiaris
ENSSDUG00000008402	sfpq	66	74.545	ENSCAFG00000018271	-	82	62.681	Canis_familiaris
ENSSDUG00000008402	sfpq	52	70.000	ENSCAFG00020010702	-	100	70.286	Canis_lupus_dingo
ENSSDUG00000008402	sfpq	66	74.545	ENSCAFG00020004881	-	82	62.568	Canis_lupus_dingo
ENSSDUG00000008402	sfpq	65	78.291	ENSCHIG00000023097	SFPQ	74	67.173	Capra_hircus
ENSSDUG00000008402	sfpq	52	66.379	ENSTSYG00000035106	-	98	63.401	Carlito_syrichta
ENSSDUG00000008402	sfpq	52	76.705	ENSTSYG00000037120	-	100	74.359	Carlito_syrichta
ENSSDUG00000008402	sfpq	52	68.661	ENSCPOG00000015018	-	100	64.641	Cavia_porcellus
ENSSDUG00000008402	sfpq	56	81.285	ENSCATG00000036179	-	54	77.174	Cercocebus_atys
ENSSDUG00000008402	sfpq	65	52.955	ENSCATG00000032664	-	78	42.024	Cercocebus_atys
ENSSDUG00000008402	sfpq	52	76.705	ENSCLAG00000009583	-	100	74.359	Chinchilla_lanigera
ENSSDUG00000008402	sfpq	65	78.291	ENSCSAG00000001082	SFPQ	79	63.923	Chlorocebus_sabaeus
ENSSDUG00000008402	sfpq	57	76.378	ENSCHOG00000009131	SFPQ	100	74.211	Choloepus_hoffmanni
ENSSDUG00000008402	sfpq	66	76.351	ENSCPBG00000018674	SFPQ	76	68.155	Chrysemys_picta_bellii
ENSSDUG00000008402	sfpq	52	76.705	ENSCANG00000028087	-	100	74.359	Colobus_angolensis_palliatus
ENSSDUG00000008402	sfpq	65	78.291	ENSCGRG00001011698	Sfpq	61	76.620	Cricetulus_griseus_chok1gshd
ENSSDUG00000008402	sfpq	64	78.140	ENSCGRG00000010128	Sfpq	95	76.566	Cricetulus_griseus_crigri
ENSSDUG00000008402	sfpq	100	71.534	ENSCSEG00000007852	sfpq	100	70.839	Cynoglossus_semilaevis
ENSSDUG00000008402	sfpq	100	68.971	ENSCVAG00000019538	sfpq	93	76.740	Cyprinodon_variegatus
ENSSDUG00000008402	sfpq	95	64.537	ENSDARG00000011564	sfpq	100	87.826	Danio_rerio
ENSSDUG00000008402	sfpq	65	78.291	ENSDNOG00000049454	SFPQ	74	67.433	Dasypus_novemcinctus
ENSSDUG00000008402	sfpq	65	78.291	ENSDORG00000008109	Sfpq	87	59.774	Dipodomys_ordii
ENSSDUG00000008402	sfpq	65	71.759	ENSETEG00000001095	SFPQ	61	65.055	Echinops_telfairi
ENSSDUG00000008402	sfpq	65	78.291	ENSEASG00005012012	SFPQ	61	76.389	Equus_asinus_asinus
ENSSDUG00000008402	sfpq	65	78.291	ENSECAG00000000642	SFPQ	61	76.389	Equus_caballus
ENSSDUG00000008402	sfpq	69	81.250	ENSELUG00000023145	sfpq	96	68.153	Esox_lucius
ENSSDUG00000008402	sfpq	65	78.291	ENSFCAG00000042862	SFPQ	98	56.642	Felis_catus
ENSSDUG00000008402	sfpq	52	75.568	ENSFALG00000000731	SFPQ	100	74.074	Ficedula_albicollis
ENSSDUG00000008402	sfpq	52	67.705	ENSFDAG00000017723	-	100	65.909	Fukomys_damarensis
ENSSDUG00000008402	sfpq	77	72.070	ENSFHEG00000015200	sfpq	94	74.000	Fundulus_heteroclitus
ENSSDUG00000008402	sfpq	84	88.278	ENSGMOG00000011950	SFPQ	99	69.444	Gadus_morhua
ENSSDUG00000008402	sfpq	95	69.735	ENSGMOG00000011957	sfpq	99	70.489	Gadus_morhua
ENSSDUG00000008402	sfpq	66	76.244	ENSGALG00000002514	SFPQ	80	68.522	Gallus_gallus
ENSSDUG00000008402	sfpq	100	66.760	ENSGAFG00000014571	sfpq	100	67.373	Gambusia_affinis
ENSSDUG00000008402	sfpq	100	80.275	ENSGACG00000002034	sfpq	100	80.401	Gasterosteus_aculeatus
ENSSDUG00000008402	sfpq	65	78.241	ENSGGOG00000026354	SFPQ	100	74.359	Gorilla_gorilla
ENSSDUG00000008402	sfpq	100	79.764	ENSHBUG00000016818	sfpq	100	79.173	Haplochromis_burtoni
ENSSDUG00000008402	sfpq	52	76.705	ENSHGLG00100004136	-	100	74.359	Heterocephalus_glaber_male
ENSSDUG00000008402	sfpq	100	65.679	ENSHCOG00000008612	sfpq	100	67.134	Hippocampus_comes
ENSSDUG00000008402	sfpq	66	80.841	ENSIPUG00000013076	SFPQ	79	75.914	Ictalurus_punctatus
ENSSDUG00000008402	sfpq	52	76.705	ENSSTOG00000014004	-	100	74.359	Ictidomys_tridecemlineatus
ENSSDUG00000008402	sfpq	65	78.291	ENSJJAG00000015633	Sfpq	61	76.389	Jaculus_jaculus
ENSSDUG00000008402	sfpq	100	77.980	ENSKMAG00000000238	sfpq	90	77.980	Kryptolebias_marmoratus
ENSSDUG00000008402	sfpq	100	71.861	ENSLBEG00000003163	sfpq	98	74.143	Labrus_bergylta
ENSSDUG00000008402	sfpq	68	74.393	ENSLACG00000014728	SFPQ	84	68.786	Latimeria_chalumnae
ENSSDUG00000008402	sfpq	95	61.111	ENSLOCG00000001067	sfpq	93	65.983	Lepisosteus_oculatus
ENSSDUG00000008402	sfpq	65	78.060	ENSLAFG00000015951	SFPQ	86	63.879	Loxodonta_africana
ENSSDUG00000008402	sfpq	65	78.291	ENSMFAG00000000797	SFPQ	79	64.098	Macaca_fascicularis
ENSSDUG00000008402	sfpq	65	78.291	ENSMMUG00000019154	SFPQ	79	64.098	Macaca_mulatta
ENSSDUG00000008402	sfpq	65	78.291	ENSMNEG00000038895	SFPQ	79	63.923	Macaca_nemestrina
ENSSDUG00000008402	sfpq	52	73.864	ENSMLEG00000010643	-	100	71.510	Mandrillus_leucophaeus
ENSSDUG00000008402	sfpq	100	88.099	ENSMAMG00000007875	sfpq	100	87.944	Mastacembelus_armatus
ENSSDUG00000008402	sfpq	100	80.568	ENSMZEG00005026091	sfpq	100	79.970	Maylandia_zebra
ENSSDUG00000008402	sfpq	57	74.490	ENSMGAG00000004237	SFPQ	100	71.355	Meleagris_gallopavo
ENSSDUG00000008402	sfpq	65	78.291	ENSMAUG00000006402	Sfpq	80	63.700	Mesocricetus_auratus
ENSSDUG00000008402	sfpq	65	78.291	ENSMICG00000027265	SFPQ	61	76.389	Microcebus_murinus
ENSSDUG00000008402	sfpq	65	75.520	ENSMOCG00000019075	Sfpq	89	73.843	Microtus_ochrogaster
ENSSDUG00000008402	sfpq	100	82.435	ENSMMOG00000001074	sfpq	100	81.790	Mola_mola
ENSSDUG00000008402	sfpq	65	78.009	ENSMODG00000017937	SFPQ	98	57.599	Monodelphis_domestica
ENSSDUG00000008402	sfpq	100	82.870	ENSMALG00000010381	sfpq	100	82.870	Monopterus_albus
ENSSDUG00000008402	sfpq	65	78.291	MGP_CAROLIEiJ_G0026487	Sfpq	62	76.620	Mus_caroli
ENSSDUG00000008402	sfpq	65	78.291	ENSMUSG00000028820	Sfpq	62	76.620	Mus_musculus
ENSSDUG00000008402	sfpq	65	78.291	MGP_PahariEiJ_G0028818	Sfpq	92	58.540	Mus_pahari
ENSSDUG00000008402	sfpq	65	78.291	MGP_SPRETEiJ_G0027466	Sfpq	62	76.620	Mus_spretus
ENSSDUG00000008402	sfpq	65	77.880	ENSMLUG00000027090	SFPQ	97	75.982	Myotis_lucifugus
ENSSDUG00000008402	sfpq	65	78.522	ENSNGAG00000000888	Sfpq	83	60.434	Nannospalax_galili
ENSSDUG00000008402	sfpq	100	80.120	ENSNBRG00000017479	sfpq	100	80.120	Neolamprologus_brichardi
ENSSDUG00000008402	sfpq	52	76.705	ENSNLEG00000035521	-	100	74.359	Nomascus_leucogenys
ENSSDUG00000008402	sfpq	65	78.422	ENSMEUG00000014082	SFPQ	62	76.977	Notamacropus_eugenii
ENSSDUG00000008402	sfpq	66	77.500	ENSOPRG00000013696	SFPQ	62	75.626	Ochotona_princeps
ENSSDUG00000008402	sfpq	63	68.345	ENSODEG00000005485	SFPQ	76	66.826	Octodon_degus
ENSSDUG00000008402	sfpq	100	79.613	ENSONIG00000017737	sfpq	99	80.060	Oreochromis_niloticus
ENSSDUG00000008402	sfpq	52	76.638	ENSOANG00000008789	-	100	74.286	Ornithorhynchus_anatinus
ENSSDUG00000008402	sfpq	65	78.291	ENSOCUG00000001877	SFPQ	85	76.389	Oryctolagus_cuniculus
ENSSDUG00000008402	sfpq	100	67.862	ENSORLG00000007459	sfpq	100	69.114	Oryzias_latipes
ENSSDUG00000008402	sfpq	100	68.501	ENSORLG00020011818	sfpq	100	68.638	Oryzias_latipes_hni
ENSSDUG00000008402	sfpq	100	66.621	ENSORLG00015002131	sfpq	99	78.125	Oryzias_latipes_hsok
ENSSDUG00000008402	sfpq	100	66.756	ENSOMEG00000018020	sfpq	98	78.926	Oryzias_melastigma
ENSSDUG00000008402	sfpq	65	78.522	ENSOGAG00000027710	SFPQ	82	76.157	Otolemur_garnettii
ENSSDUG00000008402	sfpq	65	78.060	ENSOARG00000019439	SFPQ	66	75.000	Ovis_aries
ENSSDUG00000008402	sfpq	65	78.291	ENSPPAG00000030078	SFPQ	61	76.389	Pan_paniscus
ENSSDUG00000008402	sfpq	52	76.487	ENSPPRG00000015478	-	100	74.148	Panthera_pardus
ENSSDUG00000008402	sfpq	52	76.705	ENSPTIG00000007710	-	100	74.359	Panthera_tigris_altaica
ENSSDUG00000008402	sfpq	65	72.517	ENSPTRG00000000518	SFPQ	59	70.602	Pan_troglodytes
ENSSDUG00000008402	sfpq	65	78.291	ENSPANG00000005380	SFPQ	64	76.389	Papio_anubis
ENSSDUG00000008402	sfpq	95	66.505	ENSPKIG00000023035	sfpq	96	66.667	Paramormyrops_kingsleyae
ENSSDUG00000008402	sfpq	65	78.241	ENSPSIG00000011494	SFPQ	100	75.174	Pelodiscus_sinensis
ENSSDUG00000008402	sfpq	100	66.667	ENSPMGG00000023883	sfpq	100	67.643	Periophthalmus_magnuspinnatus
ENSSDUG00000008402	sfpq	65	78.291	ENSPEMG00000009794	Sfpq	89	76.620	Peromyscus_maniculatus_bairdii
ENSSDUG00000008402	sfpq	50	74.214	ENSPMAG00000005583	sfpq	92	61.751	Petromyzon_marinus
ENSSDUG00000008402	sfpq	65	78.241	ENSPCIG00000000923	SFPQ	62	76.798	Phascolarctos_cinereus
ENSSDUG00000008402	sfpq	100	68.634	ENSPFOG00000003127	sfpq	94	75.150	Poecilia_formosa
ENSSDUG00000008402	sfpq	100	65.097	ENSPREG00000008060	sfpq	98	74.067	Poecilia_reticulata
ENSSDUG00000008402	sfpq	65	78.291	ENSPPYG00000001560	SFPQ	79	63.923	Pongo_abelii
ENSSDUG00000008402	sfpq	64	77.907	ENSPCAG00000006164	SFPQ	60	75.991	Procavia_capensis
ENSSDUG00000008402	sfpq	65	78.291	ENSPCOG00000027127	SFPQ	84	61.824	Propithecus_coquereli
ENSSDUG00000008402	sfpq	100	78.832	ENSPNYG00000007494	sfpq	100	78.102	Pundamilia_nyererei
ENSSDUG00000008402	sfpq	83	69.908	ENSPNAG00000002128	sfpq	95	66.236	Pygocentrus_nattereri
ENSSDUG00000008402	sfpq	65	78.291	ENSRNOG00000058461	Sfpq	62	76.620	Rattus_norvegicus
ENSSDUG00000008402	sfpq	64	72.326	ENSRBIG00000035286	SFPQ	100	74.359	Rhinopithecus_bieti
ENSSDUG00000008402	sfpq	65	78.291	ENSRROG00000040992	SFPQ	100	74.359	Rhinopithecus_roxellana
ENSSDUG00000008402	sfpq	51	57.018	ENSSBOG00000033925	-	99	53.061	Saimiri_boliviensis_boliviensis
ENSSDUG00000008402	sfpq	52	76.705	ENSSBOG00000024972	-	100	74.359	Saimiri_boliviensis_boliviensis
ENSSDUG00000008402	sfpq	52	74.571	ENSSHAG00000012312	-	100	71.347	Sarcophilus_harrisii
ENSSDUG00000008402	sfpq	66	73.696	ENSSHAG00000016107	-	99	70.806	Sarcophilus_harrisii
ENSSDUG00000008402	sfpq	83	72.862	ENSSFOG00015009289	sfpq	96	73.396	Scleropages_formosus
ENSSDUG00000008402	sfpq	100	82.219	ENSSMAG00000018201	sfpq	100	81.392	Scophthalmus_maximus
ENSSDUG00000008402	sfpq	100	99.378	ENSSLDG00000018917	sfpq	100	99.378	Seriola_lalandi_dorsalis
ENSSDUG00000008402	sfpq	55	77.778	ENSSARG00000006409	SFPQ	100	75.543	Sorex_araneus
ENSSDUG00000008402	sfpq	100	82.414	ENSSPAG00000016550	sfpq	100	85.097	Stegastes_partitus
ENSSDUG00000008402	sfpq	65	78.291	ENSSSCG00000035690	SFPQ	74	67.433	Sus_scrofa
ENSSDUG00000008402	sfpq	65	77.315	ENSTGUG00000001722	SFPQ	100	74.942	Taeniopygia_guttata
ENSSDUG00000008402	sfpq	100	77.367	ENSTRUG00000003783	sfpq	100	77.071	Takifugu_rubripes
ENSSDUG00000008402	sfpq	86	79.058	ENSTNIG00000011331	sfpq	99	77.629	Tetraodon_nigroviridis
ENSSDUG00000008402	sfpq	65	75.463	ENSTTRG00000013930	SFPQ	96	57.355	Tursiops_truncatus
ENSSDUG00000008402	sfpq	52	74.432	ENSUMAG00000008056	-	100	72.080	Ursus_maritimus
ENSSDUG00000008402	sfpq	52	69.714	ENSVVUG00000000874	-	100	67.335	Vulpes_vulpes
ENSSDUG00000008402	sfpq	66	73.363	ENSXETG00000009682	sfpq	100	78.882	Xenopus_tropicalis
ENSSDUG00000008402	sfpq	94	66.032	ENSXMAG00000016391	sfpq	99	74.788	Xiphophorus_maculatus