EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000008416 (Gene tree)
Gene ID
111222065
Gene Symbol
si:ch1073-335m2.2
Alias
-
Full Name
msx2-interacting protein-like
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Minus strand
Length
21421 bases
Position
chrBDQW01000089.1:25812-47232
Accession
111222065
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000011600RRM_5PF13893.63e-0812
ENSSDUP00000011600RRM_5PF13893.63e-0822
ENSSDUP00000011574RRM_5PF13893.63.1e-0812
ENSSDUP00000011574RRM_5PF13893.63.1e-0822
ENSSDUP00000011600RRM_1PF00076.222.1e-4213
ENSSDUP00000011600RRM_1PF00076.222.1e-4223
ENSSDUP00000011600RRM_1PF00076.222.1e-4233
ENSSDUP00000011574RRM_1PF00076.222.1e-4213
ENSSDUP00000011574RRM_1PF00076.222.1e-4223
ENSSDUP00000011574RRM_1PF00076.222.1e-4233
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000011789-12844XM_022745623ENSSDUP000000115743267 (aa)XP_022601344UPI000BBE4EB9
ENSSDUT00000011816-9741-ENSSDUP000000116003246 (aa)--
Gene Model
Click here to download ENSSDUG00000008416's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008416's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000008416si:ch1073-335m2.29980.541ENSSDUG00000003476-9776.733
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000008416si:ch1073-335m2.27583.041ENSG00000065526SPEN8883.041Homo_sapiens
ENSSDUG00000008416si:ch1073-335m2.29979.459ENSAPOG00000009853-9875.743Acanthochromis_polyacanthus
ENSSDUG00000008416si:ch1073-335m2.210086.107ENSAPOG00000011411si:ch1073-335m2.210086.076Acanthochromis_polyacanthus
ENSSDUG00000008416si:ch1073-335m2.26483.626ENSAMEG00000011817SPEN7983.626Ailuropoda_melanoleuca
ENSSDUG00000008416si:ch1073-335m2.29979.459ENSAOCG00000014505-9875.743Amphiprion_ocellaris
ENSSDUG00000008416si:ch1073-335m2.28983.966ENSAOCG00000008077si:ch1073-335m2.29983.692Amphiprion_ocellaris
ENSSDUG00000008416si:ch1073-335m2.29979.459ENSAPEG00000010288-9875.743Amphiprion_percula
ENSSDUG00000008416si:ch1073-335m2.210085.648ENSAPEG00000013515si:ch1073-335m2.210085.618Amphiprion_percula
ENSSDUG00000008416si:ch1073-335m2.210084.543ENSATEG00000007674si:ch1073-335m2.210084.451Anabas_testudineus
ENSSDUG00000008416si:ch1073-335m2.29976.733ENSATEG00000005627-9776.733Anabas_testudineus
ENSSDUG00000008416si:ch1073-335m2.25264.822ENSAPLG00000012618SPEN9684.211Anas_platyrhynchos
ENSSDUG00000008416si:ch1073-335m2.28582.927ENSANAG00000034428SPEN7782.927Aotus_nancymaae
ENSSDUG00000008416si:ch1073-335m2.210079.511ENSACLG00000021433si:ch1073-335m2.210079.511Astatotilapia_calliptera
ENSSDUG00000008416si:ch1073-335m2.25469.683ENSACLG00000016922-5569.683Astatotilapia_calliptera
ENSSDUG00000008416si:ch1073-335m2.29977.540ENSAMXG00000012485spen9765.969Astyanax_mexicanus
ENSSDUG00000008416si:ch1073-335m2.28583.626ENSBTAG00000018729SPEN8483.626Bos_taurus
ENSSDUG00000008416si:ch1073-335m2.28679.429ENSCJAG00000008527SPEN8975.124Callithrix_jacchus
ENSSDUG00000008416si:ch1073-335m2.28057.657ENSCAFG00000016132-8660.355Canis_familiaris
ENSSDUG00000008416si:ch1073-335m2.26575.622ENSCHIG00000025070SPEN6675.500Capra_hircus
ENSSDUG00000008416si:ch1073-335m2.28183.626ENSTSYG00000036016SPEN8183.626Carlito_syrichta
ENSSDUG00000008416si:ch1073-335m2.29074.129ENSCAPG00000013803SPEN9274.129Cavia_aperea
ENSSDUG00000008416si:ch1073-335m2.29074.129ENSCPOG00000014036SPEN9074.129Cavia_porcellus
ENSSDUG00000008416si:ch1073-335m2.27675.124ENSCCAG00000020258SPEN7875.124Cebus_capucinus
ENSSDUG00000008416si:ch1073-335m2.28181.481ENSCATG00000015079SPEN7777.703Cercocebus_atys
ENSSDUG00000008416si:ch1073-335m2.29274.627ENSCLAG00000002018SPEN9574.627Chinchilla_lanigera
ENSSDUG00000008416si:ch1073-335m2.28675.124ENSCSAG00000000841SPEN7875.124Chlorocebus_sabaeus
ENSSDUG00000008416si:ch1073-335m2.210084.211ENSCPBG00000010477SPEN6984.211Chrysemys_picta_bellii
ENSSDUG00000008416si:ch1073-335m2.28675.124ENSCANG00000034547SPEN7875.124Colobus_angolensis_palliatus
ENSSDUG00000008416si:ch1073-335m2.28183.529ENSCGRG00001007725Spen7783.529Cricetulus_griseus_chok1gshd
ENSSDUG00000008416si:ch1073-335m2.27583.529ENSCGRG00000010581Spen7783.529Cricetulus_griseus_crigri
ENSSDUG00000008416si:ch1073-335m2.210069.196ENSCSEG00000003915-9569.196Cynoglossus_semilaevis
ENSSDUG00000008416si:ch1073-335m2.210083.432ENSCVAG00000016346-9783.432Cyprinodon_variegatus
ENSSDUG00000008416si:ch1073-335m2.210073.107ENSCVAG00000009075si:ch1073-335m2.210073.260Cyprinodon_variegatus
ENSSDUG00000008416si:ch1073-335m2.29858.931ENSDARG00000074332si:ch1073-335m2.210058.832Danio_rerio
ENSSDUG00000008416si:ch1073-335m2.29982.840ENSDARG00000074245spen10081.481Danio_rerio
ENSSDUG00000008416si:ch1073-335m2.29058.362ENSDNOG00000041948SPEN8658.362Dasypus_novemcinctus
ENSSDUG00000008416si:ch1073-335m2.28583.626ENSDORG00000023909Spen8574.038Dipodomys_ordii
ENSSDUG00000008416si:ch1073-335m2.29684.211ENSEASG00005015911SPEN9284.211Equus_asinus_asinus
ENSSDUG00000008416si:ch1073-335m2.29684.211ENSECAG00000008833SPEN9284.211Equus_caballus
ENSSDUG00000008416si:ch1073-335m2.25783.721ENSEEUG00000010255SPEN5983.721Erinaceus_europaeus
ENSSDUG00000008416si:ch1073-335m2.210065.324ENSELUG00000007726si:ch1073-335m2.210067.463Esox_lucius
ENSSDUG00000008416si:ch1073-335m2.25983.626ENSFALG00000003551SPEN9383.626Ficedula_albicollis
ENSSDUG00000008416si:ch1073-335m2.27383.432ENSFDAG00000010212SPEN7383.432Fukomys_damarensis
ENSSDUG00000008416si:ch1073-335m2.210071.729ENSFHEG00000004544si:ch1073-335m2.210071.699Fundulus_heteroclitus
ENSSDUG00000008416si:ch1073-335m2.210068.480ENSGMOG00000008156si:ch1073-335m2.210068.450Gadus_morhua
ENSSDUG00000008416si:ch1073-335m2.29268.161ENSGMOG00000008397-8979.769Gadus_morhua
ENSSDUG00000008416si:ch1073-335m2.25174.163ENSGALG00000036932SPEN9774.163Gallus_gallus
ENSSDUG00000008416si:ch1073-335m2.210073.218ENSGAFG00000021570si:ch1073-335m2.210073.209Gambusia_affinis
ENSSDUG00000008416si:ch1073-335m2.210079.120ENSGACG00000001176si:ch1073-335m2.210079.268Gasterosteus_aculeatus
ENSSDUG00000008416si:ch1073-335m2.29974.257ENSGACG00000005341-9768.445Gasterosteus_aculeatus
ENSSDUG00000008416si:ch1073-335m2.210084.211ENSGAGG00000020785SPEN9784.211Gopherus_agassizii
ENSSDUG00000008416si:ch1073-335m2.27674.627ENSGGOG00000012041SPEN8974.627Gorilla_gorilla
ENSSDUG00000008416si:ch1073-335m2.210079.725ENSHBUG00000023253si:ch1073-335m2.210082.070Haplochromis_burtoni
ENSSDUG00000008416si:ch1073-335m2.25470.136ENSHBUG00000020626-5570.136Haplochromis_burtoni
ENSSDUG00000008416si:ch1073-335m2.26374.627ENSHGLG00000019259SPEN6174.627Heterocephalus_glaber_female
ENSSDUG00000008416si:ch1073-335m2.26174.627ENSHGLG00100019294SPEN6274.627Heterocephalus_glaber_male
ENSSDUG00000008416si:ch1073-335m2.29773.619ENSHCOG00000006004si:ch1073-335m2.29973.581Hippocampus_comes
ENSSDUG00000008416si:ch1073-335m2.210072.727ENSIPUG00000021668spen9872.727Ictalurus_punctatus
ENSSDUG00000008416si:ch1073-335m2.29458.347ENSIPUG00000018212si:ch1073-335m2.29958.395Ictalurus_punctatus
ENSSDUG00000008416si:ch1073-335m2.26383.626ENSSTOG00000021428SPEN6483.626Ictidomys_tridecemlineatus
ENSSDUG00000008416si:ch1073-335m2.27963.745ENSJJAG00000010882Spen9463.745Jaculus_jaculus
ENSSDUG00000008416si:ch1073-335m2.210077.907ENSKMAG00000021725si:ch1073-335m2.210077.754Kryptolebias_marmoratus
ENSSDUG00000008416si:ch1073-335m2.29984.615ENSKMAG00000003882-9484.615Kryptolebias_marmoratus
ENSSDUG00000008416si:ch1073-335m2.28281.657ENSLBEG00000019129-9473.737Labrus_bergylta
ENSSDUG00000008416si:ch1073-335m2.210082.256ENSLBEG00000020855si:ch1073-335m2.210082.194Labrus_bergylta
ENSSDUG00000008416si:ch1073-335m2.29484.211ENSLACG00000003258SPEN9084.211Latimeria_chalumnae
ENSSDUG00000008416si:ch1073-335m2.210057.419ENSLOCG00000007896si:ch1073-335m2.29576.552Lepisosteus_oculatus
ENSSDUG00000008416si:ch1073-335m2.27884.615ENSLAFG00000004524SPEN8184.615Loxodonta_africana
ENSSDUG00000008416si:ch1073-335m2.28675.124ENSMFAG00000041974SPEN7875.124Macaca_fascicularis
ENSSDUG00000008416si:ch1073-335m2.28675.124ENSMMUG00000008026SPEN7875.124Macaca_mulatta
ENSSDUG00000008416si:ch1073-335m2.28675.124ENSMNEG00000042402SPEN7875.124Macaca_nemestrina
ENSSDUG00000008416si:ch1073-335m2.28675.124ENSMLEG00000039293SPEN7875.124Mandrillus_leucophaeus
ENSSDUG00000008416si:ch1073-335m2.210084.392ENSMAMG00000023870si:ch1073-335m2.210084.392Mastacembelus_armatus
ENSSDUG00000008416si:ch1073-335m2.210079.487ENSMZEG00005011762si:ch1073-335m2.210079.585Maylandia_zebra
ENSSDUG00000008416si:ch1073-335m2.25983.626ENSMAUG00000008318Spen8783.626Mesocricetus_auratus
ENSSDUG00000008416si:ch1073-335m2.29175.124ENSMICG00000030994SPEN9475.124Microcebus_murinus
ENSSDUG00000008416si:ch1073-335m2.27783.626ENSMOCG00000016083Spen8183.626Microtus_ochrogaster
ENSSDUG00000008416si:ch1073-335m2.210081.760ENSMMOG00000021742si:ch1073-335m2.210081.729Mola_mola
ENSSDUG00000008416si:ch1073-335m2.27480.702ENSMODG00000003411SPEN6780.702Monodelphis_domestica
ENSSDUG00000008416si:ch1073-335m2.29978.919ENSMALG00000008625-9875.248Monopterus_albus
ENSSDUG00000008416si:ch1073-335m2.28766.529MGP_CAROLIEiJ_G0026745Spen7866.529Mus_caroli
ENSSDUG00000008416si:ch1073-335m2.27765.447ENSMUSG00000040761Spen8067.292Mus_musculus
ENSSDUG00000008416si:ch1073-335m2.28583.626MGP_PahariEiJ_G0029076Spen8083.626Mus_pahari
ENSSDUG00000008416si:ch1073-335m2.27765.447MGP_SPRETEiJ_G0027724Spen8067.175Mus_spretus
ENSSDUG00000008416si:ch1073-335m2.26483.626ENSMPUG00000016317SPEN6283.626Mustela_putorius_furo
ENSSDUG00000008416si:ch1073-335m2.28881.250ENSMLUG00000010144SPEN9969.088Myotis_lucifugus
ENSSDUG00000008416si:ch1073-335m2.29280.447ENSNGAG00000000641Spen8080.447Nannospalax_galili
ENSSDUG00000008416si:ch1073-335m2.210078.857ENSNBRG00000005733si:ch1073-335m2.210078.857Neolamprologus_brichardi
ENSSDUG00000008416si:ch1073-335m2.27674.627ENSNLEG00000007652SPEN7874.500Nomascus_leucogenys
ENSSDUG00000008416si:ch1073-335m2.26981.053ENSMEUG00000002422SPEN7681.053Notamacropus_eugenii
ENSSDUG00000008416si:ch1073-335m2.25875.124ENSOPRG00000015800SPEN7675.000Ochotona_princeps
ENSSDUG00000008416si:ch1073-335m2.27374.627ENSODEG00000016644SPEN9374.627Octodon_degus
ENSSDUG00000008416si:ch1073-335m2.210070.136ENSONIG00000006573-9974.007Oreochromis_niloticus
ENSSDUG00000008416si:ch1073-335m2.26283.626ENSOCUG00000010840SPEN7374.038Oryctolagus_cuniculus
ENSSDUG00000008416si:ch1073-335m2.210073.191ENSORLG00000018414si:ch1073-335m2.210073.168Oryzias_latipes
ENSSDUG00000008416si:ch1073-335m2.27845.868ENSORLG00000028894-9068.539Oryzias_latipes
ENSSDUG00000008416si:ch1073-335m2.210073.205ENSORLG00020009351si:ch1073-335m2.210073.152Oryzias_latipes_hni
ENSSDUG00000008416si:ch1073-335m2.27846.414ENSORLG00020007735-9068.315Oryzias_latipes_hni
ENSSDUG00000008416si:ch1073-335m2.210073.099ENSORLG00015005537si:ch1073-335m2.210073.046Oryzias_latipes_hsok
ENSSDUG00000008416si:ch1073-335m2.28582.840ENSORLG00015022085-6636.269Oryzias_latipes_hsok
ENSSDUG00000008416si:ch1073-335m2.29249.602ENSOMEG00000007639-6535.906Oryzias_melastigma
ENSSDUG00000008416si:ch1073-335m2.210074.519ENSOMEG00000004509si:ch1073-335m2.210074.527Oryzias_melastigma
ENSSDUG00000008416si:ch1073-335m2.27581.006ENSOGAG00000025110SPEN8376.119Otolemur_garnettii
ENSSDUG00000008416si:ch1073-335m2.26575.622ENSOARG00000008477SPEN6775.500Ovis_aries
ENSSDUG00000008416si:ch1073-335m2.27574.627ENSPPAG00000035690SPEN7874.627Pan_paniscus
ENSSDUG00000008416si:ch1073-335m2.27674.627ENSPTRG00000000210SPEN7874.627Pan_troglodytes
ENSSDUG00000008416si:ch1073-335m2.28675.124ENSPANG00000006293SPEN7875.124Papio_anubis
ENSSDUG00000008416si:ch1073-335m2.210046.501ENSPKIG00000002617SPEN9169.318Paramormyrops_kingsleyae
ENSSDUG00000008416si:ch1073-335m2.29692.857ENSPKIG00000010492si:ch1073-335m2.29792.857Paramormyrops_kingsleyae
ENSSDUG00000008416si:ch1073-335m2.29981.921ENSPSIG00000008026SPEN9281.921Pelodiscus_sinensis
ENSSDUG00000008416si:ch1073-335m2.27383.626ENSPEMG00000022997Spen7783.626Peromyscus_maniculatus_bairdii
ENSSDUG00000008416si:ch1073-335m2.210073.500ENSPFOG00000017986si:ch1073-335m2.210073.546Poecilia_formosa
ENSSDUG00000008416si:ch1073-335m2.210073.558ENSPLAG00000016625si:ch1073-335m2.210073.628Poecilia_latipinna
ENSSDUG00000008416si:ch1073-335m2.210073.774ENSPMEG00000002674si:ch1073-335m2.210073.820Poecilia_mexicana
ENSSDUG00000008416si:ch1073-335m2.210073.666ENSPREG00000005357si:ch1073-335m2.210073.789Poecilia_reticulata
ENSSDUG00000008416si:ch1073-335m2.27674.627ENSPPYG00000001834SPEN7974.627Pongo_abelii
ENSSDUG00000008416si:ch1073-335m2.27873.558ENSPCAG00000009543SPEN7474.020Procavia_capensis
ENSSDUG00000008416si:ch1073-335m2.29972.772ENSPCOG00000021735SPEN8272.772Propithecus_coquereli
ENSSDUG00000008416si:ch1073-335m2.26481.871ENSPVAG00000013794SPEN6181.871Pteropus_vampyrus
ENSSDUG00000008416si:ch1073-335m2.25370.136ENSPNYG00000012379-5470.136Pundamilia_nyererei
ENSSDUG00000008416si:ch1073-335m2.210079.481ENSPNYG00000009042si:ch1073-335m2.210079.481Pundamilia_nyererei
ENSSDUG00000008416si:ch1073-335m2.29981.657ENSPNAG00000020795spen9781.657Pygocentrus_nattereri
ENSSDUG00000008416si:ch1073-335m2.210058.829ENSPNAG00000011452si:ch1073-335m2.210058.846Pygocentrus_nattereri
ENSSDUG00000008416si:ch1073-335m2.26675.124ENSRNOG00000033556Spen8475.500Rattus_norvegicus
ENSSDUG00000008416si:ch1073-335m2.28875.124ENSRBIG00000039654SPEN8275.124Rhinopithecus_bieti
ENSSDUG00000008416si:ch1073-335m2.28575.124ENSRROG00000035686SPEN7875.124Rhinopithecus_roxellana
ENSSDUG00000008416si:ch1073-335m2.28944.259ENSSBOG00000028770SPEN8544.333Saimiri_boliviensis_boliviensis
ENSSDUG00000008416si:ch1073-335m2.25171.635ENSSHAG00000004960SPEN9969.274Sarcophilus_harrisii
ENSSDUG00000008416si:ch1073-335m2.29986.550ENSSFOG00015010267si:ch1073-335m2.27086.550Scleropages_formosus
ENSSDUG00000008416si:ch1073-335m2.28785.799ENSSFOG00015007131si:ch1073-335m2.29785.799Scleropages_formosus
ENSSDUG00000008416si:ch1073-335m2.29979.144ENSSMAG00000008996-9579.144Scophthalmus_maximus
ENSSDUG00000008416si:ch1073-335m2.210086.614ENSSMAG00000000125si:ch1073-335m2.210087.042Scophthalmus_maximus
ENSSDUG00000008416si:ch1073-335m2.210089.859ENSSLDG00000023347si:ch1073-335m2.210097.837Seriola_lalandi_dorsalis
ENSSDUG00000008416si:ch1073-335m2.29980.541ENSSLDG00000012950-9776.733Seriola_lalandi_dorsalis
ENSSDUG00000008416si:ch1073-335m2.28886.111ENSSPUG00000001866-9784.211Sphenodon_punctatus
ENSSDUG00000008416si:ch1073-335m2.210086.413ENSSPAG00000012454si:ch1073-335m2.210086.417Stegastes_partitus
ENSSDUG00000008416si:ch1073-335m2.210069.820ENSSPAG00000006014-9869.820Stegastes_partitus
ENSSDUG00000008416si:ch1073-335m2.27656.764ENSSSCG00000034484SPEN8158.264Sus_scrofa
ENSSDUG00000008416si:ch1073-335m2.210067.532ENSTRUG00000024350-9766.555Takifugu_rubripes
ENSSDUG00000008416si:ch1073-335m2.28873.591ENSTRUG00000021008si:ch1073-335m2.210073.453Takifugu_rubripes
ENSSDUG00000008416si:ch1073-335m2.29979.670ENSTNIG00000010907-10068.097Tetraodon_nigroviridis
ENSSDUG00000008416si:ch1073-335m2.210073.926ENSTNIG00000014666si:ch1073-335m2.210073.714Tetraodon_nigroviridis
ENSSDUG00000008416si:ch1073-335m2.26083.626ENSTBEG00000003628SPEN5483.626Tupaia_belangeri
ENSSDUG00000008416si:ch1073-335m2.25883.626ENSTTRG00000015704SPEN6683.626Tursiops_truncatus
ENSSDUG00000008416si:ch1073-335m2.26884.211ENSUAMG00000009600SPEN8284.211Ursus_americanus
ENSSDUG00000008416si:ch1073-335m2.26384.211ENSUMAG00000021641SPEN7884.211Ursus_maritimus
ENSSDUG00000008416si:ch1073-335m2.28192.857ENSVVUG00000028951SPEN9192.857Vulpes_vulpes
ENSSDUG00000008416si:ch1073-335m2.210071.245ENSXCOG00000004516si:ch1073-335m2.210071.184Xiphophorus_couchianus
ENSSDUG00000008416si:ch1073-335m2.29982.840ENSXMAG00000021384-9868.610Xiphophorus_maculatus
ENSSDUG00000008416si:ch1073-335m2.210074.040ENSXMAG00000029887si:ch1073-335m2.210074.040Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us