EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000008447 (Gene tree)
Gene ID: 111220112
Gene Symbol: rsl1d1
Alias: si:dkey-16i5.10
Full Name: ribosomal L1 domain containing 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7082 bases
Position: chrBDQW01000068.1:15945583-15952664
Accession: 111220112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000011579	Ribosomal_L1	PF00687.21	3.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000011794	-	4859	XM_022743081	ENSSDUP00000011579	391 (aa)	XP_022598802	-

Gene Model

Click here to download ENSSDUG00000008447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000008447	rsl1d1	76	39.181	ENSG00000171490	RSL1D1	100	53.061	Homo_sapiens
ENSSDUG00000008447	rsl1d1	90	77.285	ENSAPOG00000004544	rsl1d1	98	78.453	Acanthochromis_polyacanthus
ENSSDUG00000008447	rsl1d1	82	70.807	ENSACIG00000006608	rsl1d1	91	70.418	Amphilophus_citrinellus
ENSSDUG00000008447	rsl1d1	90	79.661	ENSAOCG00000001548	rsl1d1	98	79.718	Amphiprion_ocellaris
ENSSDUG00000008447	rsl1d1	90	79.661	ENSAPEG00000003334	rsl1d1	98	79.718	Amphiprion_percula
ENSSDUG00000008447	rsl1d1	89	79.609	ENSATEG00000009247	rsl1d1	96	79.888	Anabas_testudineus
ENSSDUG00000008447	rsl1d1	76	48.036	ENSAPLG00000004451	RSL1D1	53	56.723	Anas_platyrhynchos
ENSSDUG00000008447	rsl1d1	78	40.118	ENSANAG00000028185	-	55	46.862	Aotus_nancymaae
ENSSDUG00000008447	rsl1d1	89	76.836	ENSACLG00000017535	rsl1d1	97	75.989	Astatotilapia_calliptera
ENSSDUG00000008447	rsl1d1	85	55.908	ENSAMXG00000008624	rsl1d1	98	54.496	Astyanax_mexicanus
ENSSDUG00000008447	rsl1d1	61	49.372	ENSBTAG00000014588	RSL1D1	50	49.372	Bos_taurus
ENSSDUG00000008447	rsl1d1	61	48.333	ENSCJAG00000008375	-	50	48.333	Callithrix_jacchus
ENSSDUG00000008447	rsl1d1	78	40.688	ENSCJAG00000042606	-	50	48.333	Callithrix_jacchus
ENSSDUG00000008447	rsl1d1	78	41.642	ENSCAFG00020024488	-	50	47.699	Canis_lupus_dingo
ENSSDUG00000008447	rsl1d1	77	43.590	ENSCHIG00000009867	-	55	48.954	Capra_hircus
ENSSDUG00000008447	rsl1d1	78	38.636	ENSCPOG00000010630	RSL1D1	51	46.444	Cavia_porcellus
ENSSDUG00000008447	rsl1d1	78	40.303	ENSCCAG00000031641	-	51	44.583	Cebus_capucinus
ENSSDUG00000008447	rsl1d1	61	42.917	ENSCCAG00000025197	-	52	42.917	Cebus_capucinus
ENSSDUG00000008447	rsl1d1	76	39.118	ENSCATG00000031153	RSL1D1	56	46.250	Cercocebus_atys
ENSSDUG00000008447	rsl1d1	78	39.489	ENSCLAG00000010975	RSL1D1	51	47.699	Chinchilla_lanigera
ENSSDUG00000008447	rsl1d1	66	41.154	ENSCHOG00000010827	RSL1D1	50	42.798	Choloepus_hoffmanni
ENSSDUG00000008447	rsl1d1	65	53.543	ENSCPBG00000004564	RSL1D1	93	54.930	Chrysemys_picta_bellii
ENSSDUG00000008447	rsl1d1	58	31.579	ENSCING00000011810	-	100	31.579	Ciona_intestinalis
ENSSDUG00000008447	rsl1d1	70	31.186	ENSCSAVG00000011797	-	69	32.068	Ciona_savignyi
ENSSDUG00000008447	rsl1d1	76	39.589	ENSCANG00000029202	RSL1D1	51	47.083	Colobus_angolensis_palliatus
ENSSDUG00000008447	rsl1d1	60	47.034	ENSCGRG00001014989	Rsl1d1	53	47.034	Cricetulus_griseus_chok1gshd
ENSSDUG00000008447	rsl1d1	60	47.034	ENSCGRG00000001905	Rsl1d1	53	47.034	Cricetulus_griseus_crigri
ENSSDUG00000008447	rsl1d1	90	72.055	ENSCSEG00000019693	rsl1d1	98	71.271	Cynoglossus_semilaevis
ENSSDUG00000008447	rsl1d1	92	70.195	ENSCVAG00000000672	rsl1d1	99	69.916	Cyprinodon_variegatus
ENSSDUG00000008447	rsl1d1	84	61.398	ENSDARG00000055868	rsl1d1	91	59.366	Danio_rerio
ENSSDUG00000008447	rsl1d1	80	39.227	ENSDNOG00000040779	-	50	46.091	Dasypus_novemcinctus
ENSSDUG00000008447	rsl1d1	62	44.082	ENSEBUG00000005400	-	59	43.902	Eptatretus_burgeri
ENSSDUG00000008447	rsl1d1	90	66.193	ENSELUG00000019243	rsl1d1	100	63.636	Esox_lucius
ENSSDUG00000008447	rsl1d1	76	49.697	ENSFALG00000003869	RSL1D1	68	47.112	Ficedula_albicollis
ENSSDUG00000008447	rsl1d1	84	40.884	ENSFDAG00000011414	RSL1D1	53	47.280	Fukomys_damarensis
ENSSDUG00000008447	rsl1d1	93	70.137	ENSFHEG00000017235	rsl1d1	96	69.041	Fundulus_heteroclitus
ENSSDUG00000008447	rsl1d1	79	59.547	ENSGMOG00000013048	rsl1d1	88	67.871	Gadus_morhua
ENSSDUG00000008447	rsl1d1	77	47.516	ENSGALG00000033690	RSL1D1	54	55.187	Gallus_gallus
ENSSDUG00000008447	rsl1d1	92	65.123	ENSGAFG00000020794	rsl1d1	95	66.304	Gambusia_affinis
ENSSDUG00000008447	rsl1d1	88	62.319	ENSGACG00000004483	rsl1d1	94	61.159	Gasterosteus_aculeatus
ENSSDUG00000008447	rsl1d1	89	78.348	ENSHBUG00000001551	rsl1d1	96	76.353	Haplochromis_burtoni
ENSSDUG00000008447	rsl1d1	84	40.503	ENSHGLG00000006774	RSL1D1	54	48.117	Heterocephalus_glaber_female
ENSSDUG00000008447	rsl1d1	84	40.503	ENSHGLG00100017781	RSL1D1	54	48.117	Heterocephalus_glaber_male
ENSSDUG00000008447	rsl1d1	80	60.692	ENSHCOG00000015208	rsl1d1	87	60.383	Hippocampus_comes
ENSSDUG00000008447	rsl1d1	90	56.667	ENSIPUG00000001677	rsl1d1	95	56.389	Ictalurus_punctatus
ENSSDUG00000008447	rsl1d1	77	37.805	ENSJJAG00000012115	Rsl1d1	51	43.644	Jaculus_jaculus
ENSSDUG00000008447	rsl1d1	91	69.252	ENSKMAG00000021908	rsl1d1	98	69.613	Kryptolebias_marmoratus
ENSSDUG00000008447	rsl1d1	80	75.238	ENSLBEG00000001076	rsl1d1	97	72.881	Labrus_bergylta
ENSSDUG00000008447	rsl1d1	83	57.407	ENSLOCG00000007416	rsl1d1	70	56.369	Lepisosteus_oculatus
ENSSDUG00000008447	rsl1d1	79	39.710	ENSLAFG00000013664	RSL1D1	51	46.888	Loxodonta_africana
ENSSDUG00000008447	rsl1d1	76	39.296	ENSMMUG00000019632	RSL1D1	99	52.866	Macaca_mulatta
ENSSDUG00000008447	rsl1d1	76	39.118	ENSMLEG00000042058	RSL1D1	50	46.250	Mandrillus_leucophaeus
ENSSDUG00000008447	rsl1d1	89	81.127	ENSMAMG00000004385	rsl1d1	97	80.563	Mastacembelus_armatus
ENSSDUG00000008447	rsl1d1	89	77.119	ENSMZEG00005007150	rsl1d1	97	75.989	Maylandia_zebra
ENSSDUG00000008447	rsl1d1	84	45.556	ENSMGAG00000000863	RSL1D1	54	54.852	Meleagris_gallopavo
ENSSDUG00000008447	rsl1d1	78	40.118	ENSMOCG00000017724	Rsl1d1	54	45.763	Microtus_ochrogaster
ENSSDUG00000008447	rsl1d1	78	66.993	ENSMMOG00000003730	rsl1d1	98	65.552	Mola_mola
ENSSDUG00000008447	rsl1d1	80	39.241	ENSMODG00000029494	-	58	42.688	Monodelphis_domestica
ENSSDUG00000008447	rsl1d1	88	41.910	ENSMODG00000004625	-	53	51.240	Monodelphis_domestica
ENSSDUG00000008447	rsl1d1	89	78.273	ENSMALG00000009531	rsl1d1	97	77.437	Monopterus_albus
ENSSDUG00000008447	rsl1d1	78	41.018	ENSMUSG00000005846	Rsl1d1	52	44.915	Mus_musculus
ENSSDUG00000008447	rsl1d1	76	40.367	MGP_PahariEiJ_G0016164	Rsl1d1	52	44.492	Mus_pahari
ENSSDUG00000008447	rsl1d1	78	39.820	MGP_SPRETEiJ_G0021352	Rsl1d1	52	44.915	Mus_spretus
ENSSDUG00000008447	rsl1d1	90	35.135	ENSNGAG00000013578	-	52	42.797	Nannospalax_galili
ENSSDUG00000008447	rsl1d1	90	36.881	ENSNGAG00000009086	-	51	44.915	Nannospalax_galili
ENSSDUG00000008447	rsl1d1	89	77.183	ENSNBRG00000002777	rsl1d1	96	76.620	Neolamprologus_brichardi
ENSSDUG00000008447	rsl1d1	76	39.474	ENSNLEG00000012149	-	63	47.083	Nomascus_leucogenys
ENSSDUG00000008447	rsl1d1	84	43.605	ENSOPRG00000004442	-	54	48.583	Ochotona_princeps
ENSSDUG00000008447	rsl1d1	87	76.857	ENSONIG00000019757	rsl1d1	99	77.714	Oreochromis_niloticus
ENSSDUG00000008447	rsl1d1	84	39.467	ENSOCUG00000004751	RSL1D1	53	48.193	Oryctolagus_cuniculus
ENSSDUG00000008447	rsl1d1	92	67.036	ENSORLG00000002877	rsl1d1	98	67.036	Oryzias_latipes
ENSSDUG00000008447	rsl1d1	92	65.928	ENSORLG00020006636	rsl1d1	98	65.928	Oryzias_latipes_hni
ENSSDUG00000008447	rsl1d1	92	65.928	ENSORLG00015005427	rsl1d1	98	65.928	Oryzias_latipes_hsok
ENSSDUG00000008447	rsl1d1	92	65.374	ENSOMEG00000008036	rsl1d1	95	66.205	Oryzias_melastigma
ENSSDUG00000008447	rsl1d1	78	41.739	ENSOGAG00000015151	RSL1D1	50	48.971	Otolemur_garnettii
ENSSDUG00000008447	rsl1d1	61	48.536	ENSOARG00000006923	RSL1D1	50	48.536	Ovis_aries
ENSSDUG00000008447	rsl1d1	90	52.957	ENSPKIG00000022687	rsl1d1	80	55.340	Paramormyrops_kingsleyae
ENSSDUG00000008447	rsl1d1	79	47.904	ENSPSIG00000011642	RSL1D1	55	54.618	Pelodiscus_sinensis
ENSSDUG00000008447	rsl1d1	78	68.489	ENSPMGG00000022261	rsl1d1	98	68.197	Periophthalmus_magnuspinnatus
ENSSDUG00000008447	rsl1d1	89	45.556	ENSPCIG00000026851	-	77	46.732	Phascolarctos_cinereus
ENSSDUG00000008447	rsl1d1	79	62.242	ENSPFOG00000005017	rsl1d1	71	74.118	Poecilia_formosa
ENSSDUG00000008447	rsl1d1	92	64.228	ENSPLAG00000000482	rsl1d1	86	63.686	Poecilia_latipinna
ENSSDUG00000008447	rsl1d1	92	65.940	ENSPMEG00000007032	rsl1d1	95	64.865	Poecilia_mexicana
ENSSDUG00000008447	rsl1d1	90	56.499	ENSPREG00000016619	rsl1d1	76	65.333	Poecilia_reticulata
ENSSDUG00000008447	rsl1d1	76	37.618	ENSPPYG00000019335	-	53	42.797	Pongo_abelii
ENSSDUG00000008447	rsl1d1	79	38.244	ENSPCOG00000022456	RSL1D1	59	44.068	Propithecus_coquereli
ENSSDUG00000008447	rsl1d1	78	40.741	ENSPVAG00000005014	RSL1D1	50	48.536	Pteropus_vampyrus
ENSSDUG00000008447	rsl1d1	89	76.554	ENSPNYG00000002850	rsl1d1	96	75.706	Pundamilia_nyererei
ENSSDUG00000008447	rsl1d1	89	56.944	ENSPNAG00000011848	rsl1d1	97	56.403	Pygocentrus_nattereri
ENSSDUG00000008447	rsl1d1	78	41.108	ENSRNOG00000048608	Rsl1d1l1	51	46.444	Rattus_norvegicus
ENSSDUG00000008447	rsl1d1	78	41.108	ENSRNOG00000061236	LOC108348298	51	46.444	Rattus_norvegicus
ENSSDUG00000008447	rsl1d1	73	57.491	ENSSFOG00015011354	rsl1d1	74	60.700	Scleropages_formosus
ENSSDUG00000008447	rsl1d1	76	78.808	ENSSMAG00000007957	rsl1d1	95	74.000	Scophthalmus_maximus
ENSSDUG00000008447	rsl1d1	91	96.328	ENSSLDG00000008293	rsl1d1	98	96.328	Seriola_lalandi_dorsalis
ENSSDUG00000008447	rsl1d1	77	50.309	ENSSPUG00000007525	RSL1D1	53	57.676	Sphenodon_punctatus
ENSSDUG00000008447	rsl1d1	91	74.317	ENSSPAG00000009755	rsl1d1	98	75.683	Stegastes_partitus
ENSSDUG00000008447	rsl1d1	96	38.702	ENSSSCG00000023984	RSL1D1	50	48.780	Sus_scrofa
ENSSDUG00000008447	rsl1d1	62	57.676	ENSTGUG00000005174	RSL1D1	98	57.676	Taeniopygia_guttata
ENSSDUG00000008447	rsl1d1	91	64.266	ENSTRUG00000016970	rsl1d1	97	64.167	Takifugu_rubripes
ENSSDUG00000008447	rsl1d1	90	66.479	ENSTNIG00000012925	rsl1d1	97	65.922	Tetraodon_nigroviridis
ENSSDUG00000008447	rsl1d1	61	48.954	ENSTTRG00000011629	RSL1D1	50	48.954	Tursiops_truncatus
ENSSDUG00000008447	rsl1d1	83	41.311	ENSUAMG00000004470	RSL1D1	51	49.000	Ursus_americanus
ENSSDUG00000008447	rsl1d1	79	36.735	ENSVVUG00000024962	-	50	41.463	Vulpes_vulpes
ENSSDUG00000008447	rsl1d1	78	53.651	ENSXETG00000033365	-	55	59.592	Xenopus_tropicalis
ENSSDUG00000008447	rsl1d1	62	80.405	ENSXCOG00000003117	rsl1d1	97	80.405	Xiphophorus_couchianus
ENSSDUG00000008447	rsl1d1	62	75.410	ENSXMAG00000025111	rsl1d1	70	75.410	Xiphophorus_maculatus