EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSSDUG00000008456 (Gene tree)
Gene ID: 111226793
Gene Symbol: fam193b
Alias: -
Full Name: family with sequence similarity 193 member B
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 17096 bases
Position: chrBDQW01000161.1:1687026-1704121
Accession: 111226793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000011658	DEAD	PF00270.29	1.4e-44	1	1
ENSSDUP00000011643	DEAD	PF00270.29	1.5e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000011804	-	4577	XM_022752105	ENSSDUP00000011588	970 (aa)	XP_022607826	UPI000BBEEDCE
ENSSDUT00000011860	-	1878	-	ENSSDUP00000011643	625 (aa)	-	-
ENSSDUT00000011875	-	2855	XM_022751902	ENSSDUP00000011658	614 (aa)	XP_022607623	UPI000BBE5A4C

Gene Model

Click here to download ENSSDUG00000008456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008456's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000008456	fam193b	62	31.266	ENSSDUG00000011557	ddx39b	86	31.266
ENSSDUG00000008456	fam193b	68	38.497	ENSSDUG00000004279	-	69	37.644
ENSSDUG00000008456	fam193b	68	38.041	ENSSDUG00000013166	-	64	36.842
ENSSDUG00000008456	fam193b	64	41.058	ENSSDUG00000020120	ddx43	54	41.058
ENSSDUG00000008456	fam193b	62	30.233	ENSSDUG00000020224	ddx39aa	87	30.233
ENSSDUG00000008456	fam193b	68	34.762	ENSSDUG00000007138	kif14	63	34.762
ENSSDUG00000008456	fam193b	63	31.486	ENSSDUG00000015980	ddx20	50	31.486
ENSSDUG00000008456	fam193b	63	34.058	ENSSDUG00000023568	ddx55	67	34.058
ENSSDUG00000008456	fam193b	66	40.580	ENSSDUG00000017954	ddx5	70	40.191
ENSSDUG00000008456	fam193b	60	32.075	ENSSDUG00000021512	eif4a3	87	32.075
ENSSDUG00000008456	fam193b	54	30.504	ENSSDUG00000011751	ddx31	66	30.504
ENSSDUG00000008456	fam193b	60	30.688	ENSSDUG00000019695	ddx6	75	30.952
ENSSDUG00000008456	fam193b	62	32.010	ENSSDUG00000009696	ddx49	79	32.010
ENSSDUG00000008456	fam193b	62	31.169	ENSSDUG00000004913	eif4a1b	91	31.169
ENSSDUG00000008456	fam193b	67	39.091	ENSSDUG00000019456	DDX5	63	39.853
ENSSDUG00000008456	fam193b	77	39.059	ENSSDUG00000022221	ddx42	53	39.059
ENSSDUG00000008456	fam193b	54	31.657	ENSSDUG00000009075	DDX39A	93	31.657
ENSSDUG00000008456	fam193b	62	30.729	ENSSDUG00000010103	eif4a2	89	30.729
ENSSDUG00000008456	fam193b	67	39.150	ENSSDUG00000022459	ddx23	61	38.229
ENSSDUG00000008456	fam193b	60	30.105	ENSSDUG00000000334	ddx19	78	30.105
ENSSDUG00000008456	fam193b	66	39.518	ENSSDUG00000016136	-	82	39.663
ENSSDUG00000008456	fam193b	67	30.211	ENSSDUG00000004022	ddx52	63	30.211
ENSSDUG00000008456	fam193b	62	33.075	ENSSDUG00000018855	ddx27	51	33.075
ENSSDUG00000008456	fam193b	64	39.753	ENSSDUG00000022015	ddx4	63	39.753
ENSSDUG00000008456	fam193b	66	39.609	ENSSDUG00000020428	-	62	39.423
ENSSDUG00000008456	fam193b	60	30.159	ENSSDUG00000007530	-	74	30.159
ENSSDUG00000008456	fam193b	55	35.777	ENSSDUG00000018110	ddx47	62	35.965