EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000008505 (Gene tree)
Gene ID: 111231050
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 10138 bases
Position: chrBDQW01000291.1:1222942-1233079
Accession: 111231050
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000011671	MMR_HSR1	PF01926.23	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000011888	-	3138	XM_022758013	ENSSDUP00000011671	242 (aa)	XP_022613734	UPI000BBE56C9

Gene Model

Click here to download ENSSDUG00000008505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008505's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000008505	rab12	69	30.000	ENSSDUG00000015078	rasl11a	68	30.000
ENSSDUG00000008505	rab12	66	35.220	ENSSDUG00000017131	rab22a	81	35.220
ENSSDUG00000008505	rab12	79	40.104	ENSSDUG00000013724	rab2a	79	43.452
ENSSDUG00000008505	rab12	70	41.279	ENSSDUG00000011851	rab42a	78	41.279
ENSSDUG00000008505	rab12	74	38.251	ENSSDUG00000008151	zgc:101559	77	38.251
ENSSDUG00000008505	rab12	71	46.512	ENSSDUG00000013325	rab30	84	46.512
ENSSDUG00000008505	rab12	68	36.310	ENSSDUG00000003386	rab9a	83	36.310
ENSSDUG00000008505	rab12	68	37.500	ENSSDUG00000005037	-	78	37.500
ENSSDUG00000008505	rab12	71	50.581	ENSSDUG00000006307	-	86	50.581
ENSSDUG00000008505	rab12	84	38.537	ENSSDUG00000009735	rab25a	86	39.130
ENSSDUG00000008505	rab12	65	35.185	ENSSDUG00000004119	rab36	53	35.185
ENSSDUG00000008505	rab12	71	41.714	ENSSDUG00000006260	rab25b	89	41.714
ENSSDUG00000008505	rab12	55	32.836	ENSSDUG00000010675	si:ch73-116o1.2	76	30.952
ENSSDUG00000008505	rab12	66	33.537	ENSSDUG00000010942	rab34a	61	33.537
ENSSDUG00000008505	rab12	84	37.037	ENSSDUG00000002965	rab11ba	75	41.975
ENSSDUG00000008505	rab12	79	37.173	ENSSDUG00000009251	rab6bb	84	37.714
ENSSDUG00000008505	rab12	69	42.857	ENSSDUG00000014091	-	78	42.857
ENSSDUG00000008505	rab12	74	40.782	ENSSDUG00000004633	RAB15	84	40.782
ENSSDUG00000008505	rab12	71	45.930	ENSSDUG00000004445	zgc:171927	80	45.930
ENSSDUG00000008505	rab12	71	40.698	ENSSDUG00000005719	si:dkey-16l2.16	81	40.698
ENSSDUG00000008505	rab12	84	38.028	ENSSDUG00000002580	rab11a	95	38.028
ENSSDUG00000008505	rab12	77	43.005	ENSSDUG00000005627	rab15	80	44.444
ENSSDUG00000008505	rab12	84	37.736	ENSSDUG00000002934	-	75	42.424
ENSSDUG00000008505	rab12	77	32.990	ENSSDUG00000023508	rab23	78	35.329
ENSSDUG00000008505	rab12	79	35.678	ENSSDUG00000006543	RAB29	85	37.791
ENSSDUG00000008505	rab12	80	35.859	ENSSDUG00000013968	rab33a	68	40.491
ENSSDUG00000008505	rab12	50	35.772	ENSSDUG00000023163	rras2	85	31.792
ENSSDUG00000008505	rab12	66	38.994	ENSSDUG00000018970	RAB6B	73	39.744
ENSSDUG00000008505	rab12	67	32.515	ENSSDUG00000014765	rabl2	71	32.515
ENSSDUG00000008505	rab12	84	37.500	ENSSDUG00000013558	rab11bb	75	42.424
ENSSDUG00000008505	rab12	67	48.780	ENSSDUG00000005960	rab18b	79	48.780
ENSSDUG00000008505	rab12	68	38.095	ENSSDUG00000019738	si:dkey-13a21.4	82	38.095
ENSSDUG00000008505	rab12	66	39.623	ENSSDUG00000021882	rab6ba	84	37.143
ENSSDUG00000008505	rab12	70	47.929	ENSSDUG00000004698	rab1ba	84	47.929
ENSSDUG00000008505	rab12	84	37.619	ENSSDUG00000006278	rab11al	76	41.818
ENSSDUG00000008505	rab12	69	31.138	ENSSDUG00000009122	rheb	89	31.138
ENSSDUG00000008505	rab12	73	37.696	ENSSDUG00000001791	rab33ba	78	37.696
ENSSDUG00000008505	rab12	86	35.849	ENSSDUG00000004551	rab14	80	39.884
ENSSDUG00000008505	rab12	67	45.062	ENSSDUG00000004950	rab35b	94	41.361
ENSSDUG00000008505	rab12	74	37.222	ENSSDUG00000006618	RAB17	78	37.222
ENSSDUG00000008505	rab12	81	37.056	ENSSDUG00000013050	-	80	39.884
ENSSDUG00000008505	rab12	62	31.126	ENSSDUG00000017779	kras	85	31.481
ENSSDUG00000008505	rab12	70	30.000	ENSSDUG00000016858	-	90	30.000
ENSSDUG00000008505	rab12	77	38.421	ENSSDUG00000008011	-	81	37.870
ENSSDUG00000008505	rab12	65	31.447	ENSSDUG00000007311	rhebl1	85	31.447
ENSSDUG00000008505	rab12	83	31.863	ENSSDUG00000007575	rab9b	82	35.714
ENSSDUG00000008505	rab12	61	39.869	ENSSDUG00000019885	-	63	39.869
ENSSDUG00000008505	rab12	74	36.872	ENSSDUG00000009835	rab5aa	81	36.872
ENSSDUG00000008505	rab12	81	44.388	ENSSDUG00000022535	RAB1A	83	49.704
ENSSDUG00000008505	rab12	67	48.780	ENSSDUG00000003823	rab18a	79	48.780
ENSSDUG00000008505	rab12	71	37.791	ENSSDUG00000023008	rab5c	76	37.791
ENSSDUG00000008505	rab12	65	35.404	ENSSDUG00000016760	rab34b	50	35.185
ENSSDUG00000008505	rab12	83	35.149	ENSSDUG00000013496	-	76	40.000
ENSSDUG00000008505	rab12	78	46.277	ENSSDUG00000016888	rab1ab	83	48.066

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000008505	rab12	100	80.738	ENSG00000206418	RAB12	100	84.016	Homo_sapiens
ENSSDUG00000008505	rab12	90	78.082	ENSAMEG00000007452	RAB12	94	81.735	Ailuropoda_melanoleuca
ENSSDUG00000008505	rab12	100	98.361	ENSACIG00000020616	rab12	100	98.361	Amphilophus_citrinellus
ENSSDUG00000008505	rab12	100	97.942	ENSAOCG00000002130	rab12	100	97.942	Amphiprion_ocellaris
ENSSDUG00000008505	rab12	100	97.942	ENSAPEG00000013255	rab12	100	97.942	Amphiprion_percula
ENSSDUG00000008505	rab12	100	99.174	ENSATEG00000019683	rab12	100	99.174	Anabas_testudineus
ENSSDUG00000008505	rab12	83	89.500	ENSACAG00000003360	RAB12	86	87.892	Anolis_carolinensis
ENSSDUG00000008505	rab12	100	98.765	ENSACLG00000007696	rab12	100	98.765	Astatotilapia_calliptera
ENSSDUG00000008505	rab12	100	88.618	ENSAMXG00000004882	rab12	100	89.431	Astyanax_mexicanus
ENSSDUG00000008505	rab12	93	84.889	ENSBTAG00000010356	RAB12	100	84.426	Bos_taurus
ENSSDUG00000008505	rab12	93	85.398	ENSCJAG00000015468	RAB12	72	84.898	Callithrix_jacchus
ENSSDUG00000008505	rab12	93	84.444	ENSCAFG00020023721	RAB12	84	84.016	Canis_lupus_dingo
ENSSDUG00000008505	rab12	93	84.889	ENSCHIG00000016103	RAB12	100	84.426	Capra_hircus
ENSSDUG00000008505	rab12	86	85.238	ENSCPOG00000022689	RAB12	100	89.524	Cavia_porcellus
ENSSDUG00000008505	rab12	100	81.633	ENSCCAG00000022862	RAB12	100	84.898	Cebus_capucinus
ENSSDUG00000008505	rab12	91	84.375	ENSCATG00000037784	RAB12	93	87.892	Cercocebus_atys
ENSSDUG00000008505	rab12	84	88.780	ENSCSAG00000017569	RAB12	72	83.468	Chlorocebus_sabaeus
ENSSDUG00000008505	rab12	93	82.743	ENSCPBG00000028375	RAB12	100	82.449	Chrysemys_picta_bellii
ENSSDUG00000008505	rab12	90	84.475	ENSCANG00000031453	RAB12	99	88.128	Colobus_angolensis_palliatus
ENSSDUG00000008505	rab12	93	84.513	ENSCGRG00001006958	Rab12	83	83.673	Cricetulus_griseus_chok1gshd
ENSSDUG00000008505	rab12	100	98.765	ENSCSEG00000016933	rab12	100	98.765	Cynoglossus_semilaevis
ENSSDUG00000008505	rab12	100	96.341	ENSCVAG00000003539	rab12	100	96.341	Cyprinodon_variegatus
ENSSDUG00000008505	rab12	100	87.603	ENSDARG00000089428	rab12	94	93.182	Danio_rerio
ENSSDUG00000008505	rab12	84	88.293	ENSDNOG00000046064	RAB12	51	87.444	Dasypus_novemcinctus
ENSSDUG00000008505	rab12	93	83.260	ENSDORG00000008920	Rab12	98	87.892	Dipodomys_ordii
ENSSDUG00000008505	rab12	78	65.079	ENSEBUG00000006581	rab12	89	66.484	Eptatretus_burgeri
ENSSDUG00000008505	rab12	93	84.513	ENSEASG00005002926	RAB12	83	84.082	Equus_asinus_asinus
ENSSDUG00000008505	rab12	93	84.513	ENSECAG00000007384	RAB12	71	84.082	Equus_caballus
ENSSDUG00000008505	rab12	100	91.736	ENSELUG00000007123	rab12	100	90.083	Esox_lucius
ENSSDUG00000008505	rab12	93	84.444	ENSFCAG00000027710	RAB12	72	84.016	Felis_catus
ENSSDUG00000008505	rab12	100	96.327	ENSFHEG00000004319	rab12	100	96.327	Fundulus_heteroclitus
ENSSDUG00000008505	rab12	86	92.308	ENSGMOG00000012335	rab12	87	90.385	Gadus_morhua
ENSSDUG00000008505	rab12	93	83.772	ENSGALG00000033608	RAB12	89	87.892	Gallus_gallus
ENSSDUG00000008505	rab12	90	93.548	ENSGACG00000016639	rab12	100	93.548	Gasterosteus_aculeatus
ENSSDUG00000008505	rab12	93	82.301	ENSGAGG00000007278	RAB12	100	82.041	Gopherus_agassizii
ENSSDUG00000008505	rab12	100	98.765	ENSHBUG00000008497	rab12	100	98.765	Haplochromis_burtoni
ENSSDUG00000008505	rab12	95	81.034	ENSHGLG00000006189	RAB12	86	88.235	Heterocephalus_glaber_female
ENSSDUG00000008505	rab12	100	92.593	ENSHCOG00000012376	rab12	100	92.181	Hippocampus_comes
ENSSDUG00000008505	rab12	91	92.760	ENSIPUG00000017401	rab12	90	92.727	Ictalurus_punctatus
ENSSDUG00000008505	rab12	93	81.858	ENSSTOG00000025122	RAB12	96	87.671	Ictidomys_tridecemlineatus
ENSSDUG00000008505	rab12	91	84.375	ENSJJAG00000019064	Rab12	98	87.892	Jaculus_jaculus
ENSSDUG00000008505	rab12	100	92.975	ENSKMAG00000020056	rab12	100	91.736	Kryptolebias_marmoratus
ENSSDUG00000008505	rab12	100	98.760	ENSLBEG00000013756	rab12	100	98.760	Labrus_bergylta
ENSSDUG00000008505	rab12	91	86.996	ENSLACG00000010461	RAB12	90	86.996	Latimeria_chalumnae
ENSSDUG00000008505	rab12	100	84.274	ENSLOCG00000002680	rab12	100	87.097	Lepisosteus_oculatus
ENSSDUG00000008505	rab12	100	80.894	ENSMFAG00000043551	RAB12	100	84.146	Macaca_fascicularis
ENSSDUG00000008505	rab12	84	88.780	ENSMNEG00000040853	RAB12	88	87.892	Macaca_nemestrina
ENSSDUG00000008505	rab12	100	99.174	ENSMAMG00000006862	rab12	100	99.174	Mastacembelus_armatus
ENSSDUG00000008505	rab12	100	98.765	ENSMZEG00005024316	rab12	100	98.765	Maylandia_zebra
ENSSDUG00000008505	rab12	83	84.804	ENSMGAG00000009197	RAB12	100	88.725	Meleagris_gallopavo
ENSSDUG00000008505	rab12	93	84.513	ENSMAUG00000008371	Rab12	83	83.673	Mesocricetus_auratus
ENSSDUG00000008505	rab12	91	83.929	ENSMICG00000030661	RAB12	93	87.444	Microcebus_murinus
ENSSDUG00000008505	rab12	90	84.018	ENSMOCG00000000452	Rab12	100	87.671	Microtus_ochrogaster
ENSSDUG00000008505	rab12	86	88.517	ENSMODG00000021452	RAB12	66	88.341	Monodelphis_domestica
ENSSDUG00000008505	rab12	100	96.281	ENSMALG00000015762	rab12	100	96.281	Monopterus_albus
ENSSDUG00000008505	rab12	93	85.398	MGP_CAROLIEiJ_G0021839	Rab12	84	84.490	Mus_caroli
ENSSDUG00000008505	rab12	93	85.398	ENSMUSG00000023460	Rab12	100	84.490	Mus_musculus
ENSSDUG00000008505	rab12	93	85.398	MGP_PahariEiJ_G0020826	Rab12	100	84.490	Mus_pahari
ENSSDUG00000008505	rab12	93	85.398	MGP_SPRETEiJ_G0022750	Rab12	83	84.490	Mus_spretus
ENSSDUG00000008505	rab12	100	80.816	ENSMLUG00000002883	RAB12	100	84.082	Myotis_lucifugus
ENSSDUG00000008505	rab12	91	76.786	ENSNGAG00000019722	-	91	76.682	Nannospalax_galili
ENSSDUG00000008505	rab12	95	81.545	ENSNGAG00000024103	-	95	87.444	Nannospalax_galili
ENSSDUG00000008505	rab12	100	98.765	ENSNBRG00000014428	rab12	100	98.765	Neolamprologus_brichardi
ENSSDUG00000008505	rab12	100	80.328	ENSNLEG00000006939	RAB12	100	83.607	Nomascus_leucogenys
ENSSDUG00000008505	rab12	100	80.894	ENSMEUG00000000493	RAB12	91	88.341	Notamacropus_eugenii
ENSSDUG00000008505	rab12	90	85.388	ENSODEG00000006414	RAB12	100	89.041	Octodon_degus
ENSSDUG00000008505	rab12	100	98.354	ENSONIG00000018469	rab12	100	98.354	Oreochromis_niloticus
ENSSDUG00000008505	rab12	100	97.521	ENSORLG00000003902	rab12	100	97.521	Oryzias_latipes
ENSSDUG00000008505	rab12	100	97.107	ENSORLG00020005131	rab12	100	97.107	Oryzias_latipes_hni
ENSSDUG00000008505	rab12	100	97.107	ENSORLG00015007869	rab12	100	97.107	Oryzias_latipes_hsok
ENSSDUG00000008505	rab12	100	98.347	ENSOMEG00000008191	rab12	100	98.347	Oryzias_melastigma
ENSSDUG00000008505	rab12	86	84.762	ENSOGAG00000028002	RAB12	99	88.571	Otolemur_garnettii
ENSSDUG00000008505	rab12	79	89.529	ENSOARG00000000728	RAB12	88	87.442	Ovis_aries
ENSSDUG00000008505	rab12	85	84.541	ENSPPAG00000009152	RAB12	97	88.835	Pan_paniscus
ENSSDUG00000008505	rab12	100	80.738	ENSPPRG00000024521	RAB12	100	84.016	Panthera_pardus
ENSSDUG00000008505	rab12	100	80.738	ENSPTRG00000009853	RAB12	100	84.016	Pan_troglodytes
ENSSDUG00000008505	rab12	100	80.972	ENSPANG00000009320	RAB12	90	88.341	Papio_anubis
ENSSDUG00000008505	rab12	100	89.712	ENSPKIG00000008579	rab12	100	89.300	Paramormyrops_kingsleyae
ENSSDUG00000008505	rab12	100	92.562	ENSPMGG00000001890	rab12	100	92.562	Periophthalmus_magnuspinnatus
ENSSDUG00000008505	rab12	93	84.956	ENSPEMG00000021032	Rab12	84	84.082	Peromyscus_maniculatus_bairdii
ENSSDUG00000008505	rab12	93	84.581	ENSPCIG00000010453	RAB12	56	88.341	Phascolarctos_cinereus
ENSSDUG00000008505	rab12	100	94.672	ENSPFOG00000001579	rab12	100	94.672	Poecilia_formosa
ENSSDUG00000008505	rab12	100	94.672	ENSPLAG00000013594	rab12	100	94.672	Poecilia_latipinna
ENSSDUG00000008505	rab12	100	94.672	ENSPMEG00000010417	rab12	100	94.672	Poecilia_mexicana
ENSSDUG00000008505	rab12	100	95.492	ENSPREG00000017487	rab12	100	95.492	Poecilia_reticulata
ENSSDUG00000008505	rab12	93	84.444	ENSPPYG00000009015	-	72	84.016	Pongo_abelii
ENSSDUG00000008505	rab12	100	80.328	ENSPCAG00000015007	RAB12	100	83.607	Procavia_capensis
ENSSDUG00000008505	rab12	100	80.738	ENSPCOG00000019816	RAB12	100	84.016	Propithecus_coquereli
ENSSDUG00000008505	rab12	100	80.328	ENSPVAG00000002757	RAB12	100	83.607	Pteropus_vampyrus
ENSSDUG00000008505	rab12	100	98.765	ENSPNYG00000023905	rab12	100	98.765	Pundamilia_nyererei
ENSSDUG00000008505	rab12	100	98.765	ENSPNYG00000005654	rab12	100	98.765	Pundamilia_nyererei
ENSSDUG00000008505	rab12	100	88.618	ENSPNAG00000015031	rab12	100	89.431	Pygocentrus_nattereri
ENSSDUG00000008505	rab12	93	83.260	ENSRNOG00000019295	Rab12	91	82.819	Rattus_norvegicus
ENSSDUG00000008505	rab12	91	84.375	ENSRBIG00000028760	RAB12	96	87.892	Rhinopithecus_bieti
ENSSDUG00000008505	rab12	91	84.375	ENSRROG00000019249	RAB12	93	87.892	Rhinopithecus_roxellana
ENSSDUG00000008505	rab12	95	79.654	ENSSBOG00000021125	RAB12	80	88.517	Saimiri_boliviensis_boliviensis
ENSSDUG00000008505	rab12	93	84.071	ENSSHAG00000001489	RAB12	90	88.670	Sarcophilus_harrisii
ENSSDUG00000008505	rab12	100	97.934	ENSSMAG00000012678	rab12	100	97.934	Scophthalmus_maximus
ENSSDUG00000008505	rab12	100	100.000	ENSSLDG00000022239	rab12	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000008505	rab12	91	85.202	ENSSPUG00000003222	RAB12	91	88.789	Sphenodon_punctatus
ENSSDUG00000008505	rab12	100	98.354	ENSSPAG00000010822	rab12	100	98.354	Stegastes_partitus
ENSSDUG00000008505	rab12	93	84.444	ENSSSCG00000038026	RAB12	100	84.426	Sus_scrofa
ENSSDUG00000008505	rab12	86	88.517	ENSTGUG00000009889	RAB12	89	88.341	Taeniopygia_guttata
ENSSDUG00000008505	rab12	100	94.215	ENSTRUG00000024455	rab12	100	94.215	Takifugu_rubripes
ENSSDUG00000008505	rab12	100	95.041	ENSTNIG00000014859	rab12	100	95.041	Tetraodon_nigroviridis
ENSSDUG00000008505	rab12	90	84.475	ENSTTRG00000008711	RAB12	99	88.128	Tursiops_truncatus
ENSSDUG00000008505	rab12	100	80.738	ENSUAMG00000018092	RAB12	100	84.016	Ursus_americanus
ENSSDUG00000008505	rab12	90	83.710	ENSVVUG00000011748	RAB12	99	87.330	Vulpes_vulpes
ENSSDUG00000008505	rab12	89	88.532	ENSXETG00000004289	rab12	72	88.393	Xenopus_tropicalis
ENSSDUG00000008505	rab12	100	94.262	ENSXCOG00000019310	rab12	100	94.672	Xiphophorus_couchianus
ENSSDUG00000008505	rab12	100	95.492	ENSXMAG00000023617	rab12	100	95.492	Xiphophorus_maculatus