EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000008513 (Gene tree)
Gene ID: 111221978
Gene Symbol: si:dkey-19e4.5
Alias: fb82g02|wu:fb82g02
Full Name: probable peptidyl-tRNA hydrolase 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 6200 bases
Position: chrBDQW01000088.1:2855288-2861487
Accession: 111221978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000011709	PTH2	PF01981.16	1.8e-35	1	1
ENSSDUP00000011690	PTH2	PF01981.16	2.1e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000011907	-	2572	XM_022745594	ENSSDUP00000011690	184 (aa)	XP_022601315	UPI000BBF2079
ENSSDUT00000011926	-	534	-	ENSSDUP00000011709	177 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000008513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000008513	si:dkey-19e4.5	65	46.552	ENSSDUG00000018478	ptrh2	59	46.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000008513	si:dkey-19e4.5	100	96.739	ENSAPOG00000018297	si:dkey-19e4.5	100	96.739	Acanthochromis_polyacanthus
ENSSDUG00000008513	si:dkey-19e4.5	100	94.350	ENSACIG00000001450	si:dkey-19e4.5	100	94.350	Amphilophus_citrinellus
ENSSDUG00000008513	si:dkey-19e4.5	100	96.739	ENSAOCG00000000622	si:dkey-19e4.5	98	98.837	Amphiprion_ocellaris
ENSSDUG00000008513	si:dkey-19e4.5	100	96.739	ENSAPEG00000017071	si:dkey-19e4.5	98	98.837	Amphiprion_percula
ENSSDUG00000008513	si:dkey-19e4.5	100	92.935	ENSATEG00000003450	si:dkey-19e4.5	100	92.935	Anabas_testudineus
ENSSDUG00000008513	si:dkey-19e4.5	64	73.684	ENSACAG00000028513	-	99	73.684	Anolis_carolinensis
ENSSDUG00000008513	si:dkey-19e4.5	100	95.652	ENSACLG00000026360	si:dkey-19e4.5	100	95.652	Astatotilapia_calliptera
ENSSDUG00000008513	si:dkey-19e4.5	100	88.587	ENSAMXG00000016302	si:dkey-19e4.5	100	88.587	Astyanax_mexicanus
ENSSDUG00000008513	si:dkey-19e4.5	100	39.086	WBGene00016062	C24G6.8	62	39.394	Caenorhabditis_elegans
ENSSDUG00000008513	si:dkey-19e4.5	100	90.761	ENSCVAG00000018623	si:dkey-19e4.5	99	92.000	Cyprinodon_variegatus
ENSSDUG00000008513	si:dkey-19e4.5	97	91.813	ENSDARG00000089886	si:dkey-19e4.5	98	91.813	Danio_rerio
ENSSDUG00000008513	si:dkey-19e4.5	97	94.767	ENSELUG00000012877	si:dkey-19e4.5	100	91.444	Esox_lucius
ENSSDUG00000008513	si:dkey-19e4.5	100	89.674	ENSFHEG00000017879	si:dkey-19e4.5	98	91.813	Fundulus_heteroclitus
ENSSDUG00000008513	si:dkey-19e4.5	76	95.522	ENSGMOG00000018615	si:dkey-19e4.5	100	95.522	Gadus_morhua
ENSSDUG00000008513	si:dkey-19e4.5	100	89.130	ENSGAFG00000008238	si:dkey-19e4.5	95	89.130	Gambusia_affinis
ENSSDUG00000008513	si:dkey-19e4.5	76	97.761	ENSGACG00000011371	si:dkey-19e4.5	100	97.761	Gasterosteus_aculeatus
ENSSDUG00000008513	si:dkey-19e4.5	100	95.652	ENSHBUG00000003898	si:dkey-19e4.5	100	95.652	Haplochromis_burtoni
ENSSDUG00000008513	si:dkey-19e4.5	100	87.568	ENSHCOG00000011175	si:dkey-19e4.5	100	87.568	Hippocampus_comes
ENSSDUG00000008513	si:dkey-19e4.5	100	86.413	ENSIPUG00000023250	si:dkey-19e4.5	100	86.413	Ictalurus_punctatus
ENSSDUG00000008513	si:dkey-19e4.5	97	88.889	ENSKMAG00000018142	si:dkey-19e4.5	100	85.870	Kryptolebias_marmoratus
ENSSDUG00000008513	si:dkey-19e4.5	100	96.196	ENSLBEG00000028494	si:dkey-19e4.5	100	96.196	Labrus_bergylta
ENSSDUG00000008513	si:dkey-19e4.5	97	70.349	ENSLACG00000003702	si:dkey-19e4.5	99	67.760	Latimeria_chalumnae
ENSSDUG00000008513	si:dkey-19e4.5	100	86.957	ENSLOCG00000013652	si:dkey-19e4.5	100	86.957	Lepisosteus_oculatus
ENSSDUG00000008513	si:dkey-19e4.5	100	95.652	ENSMAMG00000023661	si:dkey-19e4.5	100	95.652	Mastacembelus_armatus
ENSSDUG00000008513	si:dkey-19e4.5	100	95.652	ENSMZEG00005006058	si:dkey-19e4.5	100	95.652	Maylandia_zebra
ENSSDUG00000008513	si:dkey-19e4.5	100	94.022	ENSMMOG00000009678	si:dkey-19e4.5	100	94.022	Mola_mola
ENSSDUG00000008513	si:dkey-19e4.5	98	94.253	ENSMALG00000021083	si:dkey-19e4.5	98	95.322	Monopterus_albus
ENSSDUG00000008513	si:dkey-19e4.5	81	75.342	ENSNBRG00000018523	si:dkey-19e4.5	71	75.000	Neolamprologus_brichardi
ENSSDUG00000008513	si:dkey-19e4.5	100	84.783	ENSORLG00000010093	si:dkey-19e4.5	100	84.783	Oryzias_latipes
ENSSDUG00000008513	si:dkey-19e4.5	100	84.783	ENSORLG00020005940	si:dkey-19e4.5	100	84.783	Oryzias_latipes_hni
ENSSDUG00000008513	si:dkey-19e4.5	100	85.870	ENSORLG00015002105	si:dkey-19e4.5	100	85.870	Oryzias_latipes_hsok
ENSSDUG00000008513	si:dkey-19e4.5	100	85.326	ENSOMEG00000001615	si:dkey-19e4.5	100	86.286	Oryzias_melastigma
ENSSDUG00000008513	si:dkey-19e4.5	100	79.348	ENSPKIG00000016249	-	100	79.348	Paramormyrops_kingsleyae
ENSSDUG00000008513	si:dkey-19e4.5	100	88.587	ENSPKIG00000018613	-	100	88.587	Paramormyrops_kingsleyae
ENSSDUG00000008513	si:dkey-19e4.5	100	88.649	ENSPFOG00000011934	si:dkey-19e4.5	100	89.189	Poecilia_formosa
ENSSDUG00000008513	si:dkey-19e4.5	100	89.130	ENSPLAG00000012878	si:dkey-19e4.5	100	89.130	Poecilia_latipinna
ENSSDUG00000008513	si:dkey-19e4.5	100	88.649	ENSPMEG00000015916	si:dkey-19e4.5	100	89.189	Poecilia_mexicana
ENSSDUG00000008513	si:dkey-19e4.5	100	89.130	ENSPREG00000021009	si:dkey-19e4.5	100	89.130	Poecilia_reticulata
ENSSDUG00000008513	si:dkey-19e4.5	100	95.652	ENSPNYG00000007117	si:dkey-19e4.5	100	95.652	Pundamilia_nyererei
ENSSDUG00000008513	si:dkey-19e4.5	100	89.130	ENSPNAG00000009107	si:dkey-19e4.5	100	89.130	Pygocentrus_nattereri
ENSSDUG00000008513	si:dkey-19e4.5	97	87.791	ENSSFOG00015015536	-	97	88.000	Scleropages_formosus
ENSSDUG00000008513	si:dkey-19e4.5	100	87.500	ENSSFOG00015018940	-	85	87.500	Scleropages_formosus
ENSSDUG00000008513	si:dkey-19e4.5	100	96.196	ENSSMAG00000004082	si:dkey-19e4.5	100	96.196	Scophthalmus_maximus
ENSSDUG00000008513	si:dkey-19e4.5	100	86.441	ENSSLDG00000017403	si:dkey-19e4.5	100	86.441	Seriola_lalandi_dorsalis
ENSSDUG00000008513	si:dkey-19e4.5	73	70.769	ENSSPUG00000009492	-	84	70.769	Sphenodon_punctatus
ENSSDUG00000008513	si:dkey-19e4.5	100	97.283	ENSSPAG00000008798	si:dkey-19e4.5	99	98.286	Stegastes_partitus
ENSSDUG00000008513	si:dkey-19e4.5	97	91.279	ENSTRUG00000020025	si:dkey-19e4.5	100	88.043	Takifugu_rubripes
ENSSDUG00000008513	si:dkey-19e4.5	100	90.217	ENSXCOG00000002547	si:dkey-19e4.5	100	90.217	Xiphophorus_couchianus
ENSSDUG00000008513	si:dkey-19e4.5	100	90.217	ENSXMAG00000025389	si:dkey-19e4.5	100	90.217	Xiphophorus_maculatus