EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000008631 (Gene tree)
Gene ID: 111223668
Gene Symbol: farsa
Alias: farsla|wu:fj21a11|zgc:136506|zgc:158185
Full Name: phenylalanyl-tRNA synthetase subunit alpha
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 8769 bases
Position: chrBDQW01000113.1:1928732-1937500
Accession: 111223668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000011876	tRNA-synt_2d	PF01409.20	2.1e-90	1	1
ENSSDUP00000011901	tRNA-synt_2d	PF01409.20	1.2e-73	1	2
ENSSDUP00000011901	tRNA-synt_2d	PF01409.20	1.2e-73	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000012092	-	2536	XM_022747900	ENSSDUP00000011876	497 (aa)	XP_022603621	UPI000BBE82C2
ENSSDUT00000012118	-	1413	-	ENSSDUP00000011901	470 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000008631's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008631's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000008631	farsa	100	75.855	ENSG00000179115	FARSA	99	77.246	Homo_sapiens
ENSSDUG00000008631	farsa	100	92.757	ENSAPOG00000011465	farsa	100	92.757	Acanthochromis_polyacanthus
ENSSDUG00000008631	farsa	100	75.855	ENSAMEG00000012446	FARSA	98	75.855	Ailuropoda_melanoleuca
ENSSDUG00000008631	farsa	100	93.617	ENSACIG00000020499	farsa	100	93.617	Amphilophus_citrinellus
ENSSDUG00000008631	farsa	100	93.561	ENSAOCG00000000581	farsa	100	93.561	Amphiprion_ocellaris
ENSSDUG00000008631	farsa	100	93.561	ENSAPEG00000017695	farsa	100	93.561	Amphiprion_percula
ENSSDUG00000008631	farsa	100	83.439	ENSATEG00000012633	farsa	100	83.439	Anabas_testudineus
ENSSDUG00000008631	farsa	100	84.306	ENSATEG00000012807	farsa	100	84.306	Anabas_testudineus
ENSSDUG00000008631	farsa	99	76.815	ENSACAG00000017166	FARSA	84	76.815	Anolis_carolinensis
ENSSDUG00000008631	farsa	100	75.654	ENSANAG00000037420	FARSA	98	75.654	Aotus_nancymaae
ENSSDUG00000008631	farsa	100	93.763	ENSACLG00000001716	farsa	100	93.763	Astatotilapia_calliptera
ENSSDUG00000008631	farsa	100	85.513	ENSAMXG00000037912	farsa	100	85.513	Astyanax_mexicanus
ENSSDUG00000008631	farsa	100	75.252	ENSBTAG00000021374	FARSA	98	75.252	Bos_taurus
ENSSDUG00000008631	farsa	96	63.158	WBGene00001497	fars-1	94	63.158	Caenorhabditis_elegans
ENSSDUG00000008631	farsa	99	75.403	ENSCJAG00000004686	FARSA	98	71.630	Callithrix_jacchus
ENSSDUG00000008631	farsa	100	76.861	ENSCAFG00000017096	FARSA	98	76.861	Canis_familiaris
ENSSDUG00000008631	farsa	100	76.861	ENSCAFG00020005315	FARSA	98	76.861	Canis_lupus_dingo
ENSSDUG00000008631	farsa	100	71.227	ENSCHIG00000022617	FARSA	98	71.227	Capra_hircus
ENSSDUG00000008631	farsa	92	73.144	ENSTSYG00000002595	FARSA	83	73.144	Carlito_syrichta
ENSSDUG00000008631	farsa	90	77.232	ENSCAPG00000011353	FARSA	95	77.232	Cavia_aperea
ENSSDUG00000008631	farsa	100	75.654	ENSCPOG00000000787	FARSA	98	75.654	Cavia_porcellus
ENSSDUG00000008631	farsa	100	75.453	ENSCCAG00000028176	FARSA	98	75.453	Cebus_capucinus
ENSSDUG00000008631	farsa	99	75.202	ENSCLAG00000015489	FARSA	98	75.202	Chinchilla_lanigera
ENSSDUG00000008631	farsa	94	77.468	ENSCSAG00000006530	FARSA	98	77.468	Chlorocebus_sabaeus
ENSSDUG00000008631	farsa	96	80.544	ENSCPBG00000023915	FARSA	99	78.800	Chrysemys_picta_bellii
ENSSDUG00000008631	farsa	99	67.002	ENSCING00000002567	-	99	67.002	Ciona_intestinalis
ENSSDUG00000008631	farsa	99	67.606	ENSCSAVG00000010683	-	98	67.606	Ciona_savignyi
ENSSDUG00000008631	farsa	100	76.258	ENSCANG00000043649	-	98	76.258	Colobus_angolensis_palliatus
ENSSDUG00000008631	farsa	100	76.056	ENSCGRG00001019769	Farsa	98	76.056	Cricetulus_griseus_chok1gshd
ENSSDUG00000008631	farsa	100	76.056	ENSCGRG00000013415	Farsa	98	76.056	Cricetulus_griseus_crigri
ENSSDUG00000008631	farsa	100	91.751	ENSCSEG00000016214	farsa	96	91.751	Cynoglossus_semilaevis
ENSSDUG00000008631	farsa	100	90.141	ENSCVAG00000007907	farsa	100	90.141	Cyprinodon_variegatus
ENSSDUG00000008631	farsa	100	87.928	ENSDARG00000098825	farsa	100	87.928	Danio_rerio
ENSSDUG00000008631	farsa	96	76.891	ENSDNOG00000032350	FARSA	98	76.891	Dasypus_novemcinctus
ENSSDUG00000008631	farsa	99	76.411	ENSDORG00000010118	Farsa	98	76.411	Dipodomys_ordii
ENSSDUG00000008631	farsa	99	65.385	FBgn0030007	alpha-PheRS	99	65.385	Drosophila_melanogaster
ENSSDUG00000008631	farsa	100	68.813	ENSETEG00000018673	FARSA	98	68.813	Echinops_telfairi
ENSSDUG00000008631	farsa	63	66.892	ENSEBUG00000008545	farsa	99	66.892	Eptatretus_burgeri
ENSSDUG00000008631	farsa	93	94.872	ENSEASG00005004093	FARSA	81	94.872	Equus_asinus_asinus
ENSSDUG00000008631	farsa	81	94.872	ENSECAG00000015139	FARSA	93	75.855	Equus_caballus
ENSSDUG00000008631	farsa	100	88.732	ENSELUG00000010183	farsa	100	88.732	Esox_lucius
ENSSDUG00000008631	farsa	100	76.056	ENSFCAG00000023511	FARSA	98	76.056	Felis_catus
ENSSDUG00000008631	farsa	99	76.008	ENSFDAG00000005987	FARSA	98	76.008	Fukomys_damarensis
ENSSDUG00000008631	farsa	100	90.744	ENSFHEG00000009382	farsa	94	90.744	Fundulus_heteroclitus
ENSSDUG00000008631	farsa	100	85.743	ENSGMOG00000018319	farsa	100	85.743	Gadus_morhua
ENSSDUG00000008631	farsa	99	72.379	ENSGALG00000040258	FARSA	87	72.379	Gallus_gallus
ENSSDUG00000008631	farsa	100	91.147	ENSGAFG00000014146	farsa	100	91.147	Gambusia_affinis
ENSSDUG00000008631	farsa	100	90.763	ENSGACG00000006278	farsa	100	90.763	Gasterosteus_aculeatus
ENSSDUG00000008631	farsa	100	79.400	ENSGAGG00000000753	FARSA	99	79.400	Gopherus_agassizii
ENSSDUG00000008631	farsa	100	76.258	ENSGGOG00000003418	FARSA	98	76.258	Gorilla_gorilla
ENSSDUG00000008631	farsa	100	93.964	ENSHBUG00000019852	farsa	100	93.964	Haplochromis_burtoni
ENSSDUG00000008631	farsa	99	75.806	ENSHGLG00000005213	FARSA	98	75.806	Heterocephalus_glaber_female
ENSSDUG00000008631	farsa	99	76.008	ENSHGLG00100009586	FARSA	98	76.008	Heterocephalus_glaber_male
ENSSDUG00000008631	farsa	100	91.348	ENSHCOG00000019548	farsa	100	91.348	Hippocampus_comes
ENSSDUG00000008631	farsa	100	87.928	ENSIPUG00000007635	farsa	100	87.928	Ictalurus_punctatus
ENSSDUG00000008631	farsa	100	75.654	ENSSTOG00000008748	FARSA	98	75.654	Ictidomys_tridecemlineatus
ENSSDUG00000008631	farsa	100	89.738	ENSKMAG00000010698	farsa	100	89.738	Kryptolebias_marmoratus
ENSSDUG00000008631	farsa	86	91.765	ENSLBEG00000001258	farsa	97	91.765	Labrus_bergylta
ENSSDUG00000008631	farsa	100	92.555	ENSLBEG00000006757	-	100	92.555	Labrus_bergylta
ENSSDUG00000008631	farsa	93	83.801	ENSLOCG00000008389	farsa	96	83.801	Lepisosteus_oculatus
ENSSDUG00000008631	farsa	100	76.258	ENSLAFG00000016154	FARSA	98	76.258	Loxodonta_africana
ENSSDUG00000008631	farsa	100	76.056	ENSMFAG00000030595	FARSA	98	76.056	Macaca_fascicularis
ENSSDUG00000008631	farsa	100	76.056	ENSMMUG00000004390	FARSA	98	76.056	Macaca_mulatta
ENSSDUG00000008631	farsa	100	76.056	ENSMNEG00000043866	FARSA	98	76.056	Macaca_nemestrina
ENSSDUG00000008631	farsa	100	75.904	ENSMLEG00000029157	FARSA	98	75.904	Mandrillus_leucophaeus
ENSSDUG00000008631	farsa	100	90.744	ENSMAMG00000010636	farsa	100	90.744	Mastacembelus_armatus
ENSSDUG00000008631	farsa	100	93.763	ENSMZEG00005002319	farsa	100	93.763	Maylandia_zebra
ENSSDUG00000008631	farsa	100	76.258	ENSMAUG00000009188	Farsa	98	76.258	Mesocricetus_auratus
ENSSDUG00000008631	farsa	100	76.459	ENSMICG00000016272	FARSA	98	76.459	Microcebus_murinus
ENSSDUG00000008631	farsa	99	76.008	ENSMOCG00000011399	Farsa	98	76.008	Microtus_ochrogaster
ENSSDUG00000008631	farsa	100	86.922	ENSMMOG00000006287	farsa	100	86.922	Mola_mola
ENSSDUG00000008631	farsa	99	77.621	ENSMODG00000011519	FARSA	100	77.621	Monodelphis_domestica
ENSSDUG00000008631	farsa	100	88.330	ENSMALG00000001972	farsa	100	88.330	Monopterus_albus
ENSSDUG00000008631	farsa	99	76.008	MGP_CAROLIEiJ_G0031312	Farsa	98	76.008	Mus_caroli
ENSSDUG00000008631	farsa	99	76.008	ENSMUSG00000003808	Farsa	98	76.008	Mus_musculus
ENSSDUG00000008631	farsa	99	75.605	MGP_PahariEiJ_G0022917	Farsa	98	75.605	Mus_pahari
ENSSDUG00000008631	farsa	99	76.210	MGP_SPRETEiJ_G0032431	Farsa	98	76.210	Mus_spretus
ENSSDUG00000008631	farsa	100	77.062	ENSMPUG00000004400	FARSA	98	77.062	Mustela_putorius_furo
ENSSDUG00000008631	farsa	100	75.855	ENSMLUG00000012767	FARSA	98	75.855	Myotis_lucifugus
ENSSDUG00000008631	farsa	74	76.423	ENSNGAG00000018353	Farsa	100	76.423	Nannospalax_galili
ENSSDUG00000008631	farsa	100	93.159	ENSNBRG00000010063	farsa	100	93.159	Neolamprologus_brichardi
ENSSDUG00000008631	farsa	100	76.258	ENSNLEG00000012899	FARSA	98	76.258	Nomascus_leucogenys
ENSSDUG00000008631	farsa	100	78.068	ENSMEUG00000014253	FARSA	100	78.068	Notamacropus_eugenii
ENSSDUG00000008631	farsa	100	75.855	ENSOPRG00000005004	FARSA	98	75.855	Ochotona_princeps
ENSSDUG00000008631	farsa	99	75.202	ENSODEG00000010433	FARSA	98	75.202	Octodon_degus
ENSSDUG00000008631	farsa	100	93.360	ENSONIG00000008075	farsa	100	93.360	Oreochromis_niloticus
ENSSDUG00000008631	farsa	100	90.744	ENSORLG00000016406	farsa	90	90.744	Oryzias_latipes
ENSSDUG00000008631	farsa	100	90.946	ENSORLG00020021978	farsa	100	90.946	Oryzias_latipes_hni
ENSSDUG00000008631	farsa	100	90.543	ENSORLG00015015045	farsa	100	90.543	Oryzias_latipes_hsok
ENSSDUG00000008631	farsa	100	90.141	ENSOMEG00000017367	farsa	97	90.141	Oryzias_melastigma
ENSSDUG00000008631	farsa	100	75.855	ENSOGAG00000012243	FARSA	98	75.855	Otolemur_garnettii
ENSSDUG00000008631	farsa	100	75.453	ENSOARG00000009991	FARSA	92	75.453	Ovis_aries
ENSSDUG00000008631	farsa	100	76.056	ENSPPAG00000034266	FARSA	98	76.056	Pan_paniscus
ENSSDUG00000008631	farsa	100	76.056	ENSPPRG00000000346	FARSA	98	76.056	Panthera_pardus
ENSSDUG00000008631	farsa	92	78.214	ENSPTIG00000011502	FARSA	94	78.214	Panthera_tigris_altaica
ENSSDUG00000008631	farsa	100	76.056	ENSPTRG00000010550	FARSA	98	76.056	Pan_troglodytes
ENSSDUG00000008631	farsa	100	76.056	ENSPANG00000010978	FARSA	98	72.032	Papio_anubis
ENSSDUG00000008631	farsa	100	87.123	ENSPKIG00000007170	farsa	100	87.123	Paramormyrops_kingsleyae
ENSSDUG00000008631	farsa	90	75.223	ENSPSIG00000012701	FARSA	97	75.223	Pelodiscus_sinensis
ENSSDUG00000008631	farsa	100	90.446	ENSPMGG00000001401	farsa	100	90.446	Periophthalmus_magnuspinnatus
ENSSDUG00000008631	farsa	100	75.252	ENSPEMG00000012560	Farsa	98	75.252	Peromyscus_maniculatus_bairdii
ENSSDUG00000008631	farsa	100	78.270	ENSPMAG00000008453	farsa	100	78.270	Petromyzon_marinus
ENSSDUG00000008631	farsa	100	77.867	ENSPCIG00000019294	FARSA	100	77.867	Phascolarctos_cinereus
ENSSDUG00000008631	farsa	100	90.946	ENSPFOG00000001201	farsa	100	90.946	Poecilia_formosa
ENSSDUG00000008631	farsa	100	90.946	ENSPLAG00000018191	farsa	100	90.946	Poecilia_latipinna
ENSSDUG00000008631	farsa	100	91.147	ENSPMEG00000013547	farsa	100	91.147	Poecilia_mexicana
ENSSDUG00000008631	farsa	100	90.234	ENSPREG00000013620	farsa	100	90.234	Poecilia_reticulata
ENSSDUG00000008631	farsa	100	75.855	ENSPPYG00000009615	FARSA	98	75.855	Pongo_abelii
ENSSDUG00000008631	farsa	100	76.258	ENSPCAG00000015721	FARSA	98	76.258	Procavia_capensis
ENSSDUG00000008631	farsa	100	76.258	ENSPCOG00000014412	FARSA	98	76.258	Propithecus_coquereli
ENSSDUG00000008631	farsa	86	84.259	ENSPVAG00000014714	FARSA	84	84.259	Pteropus_vampyrus
ENSSDUG00000008631	farsa	100	93.964	ENSPNYG00000002144	farsa	100	93.964	Pundamilia_nyererei
ENSSDUG00000008631	farsa	100	86.922	ENSPNAG00000000869	farsa	100	86.922	Pygocentrus_nattereri
ENSSDUG00000008631	farsa	99	76.008	ENSRNOG00000003149	Farsa	98	76.008	Rattus_norvegicus
ENSSDUG00000008631	farsa	100	75.855	ENSRBIG00000025585	FARSA	97	77.384	Rhinopithecus_bieti
ENSSDUG00000008631	farsa	100	75.855	ENSRROG00000040046	FARSA	98	71.831	Rhinopithecus_roxellana
ENSSDUG00000008631	farsa	98	49.299	YFL022C	FRS2	98	48.898	Saccharomyces_cerevisiae
ENSSDUG00000008631	farsa	100	75.654	ENSSBOG00000031362	FARSA	98	75.654	Saimiri_boliviensis_boliviensis
ENSSDUG00000008631	farsa	90	78.747	ENSSHAG00000015006	FARSA	100	78.747	Sarcophilus_harrisii
ENSSDUG00000008631	farsa	100	83.903	ENSSFOG00015014864	farsa	100	83.903	Scleropages_formosus
ENSSDUG00000008631	farsa	100	93.561	ENSSMAG00000002358	farsa	100	93.561	Scophthalmus_maximus
ENSSDUG00000008631	farsa	100	98.390	ENSSLDG00000017108	farsa	100	98.390	Seriola_lalandi_dorsalis
ENSSDUG00000008631	farsa	71	94.118	ENSSARG00000006579	-	68	94.118	Sorex_araneus
ENSSDUG00000008631	farsa	90	66.667	ENSSPUG00000012509	FARSA	98	66.521	Sphenodon_punctatus
ENSSDUG00000008631	farsa	100	93.360	ENSSPAG00000018292	farsa	92	93.360	Stegastes_partitus
ENSSDUG00000008631	farsa	100	75.654	ENSSSCG00000013745	FARSA	98	75.654	Sus_scrofa
ENSSDUG00000008631	farsa	100	77.666	ENSTRUG00000010624	farsa	100	77.666	Takifugu_rubripes
ENSSDUG00000008631	farsa	100	82.093	ENSTNIG00000008330	farsa	100	82.093	Tetraodon_nigroviridis
ENSSDUG00000008631	farsa	90	73.884	ENSTBEG00000000396	FARSA	98	72.991	Tupaia_belangeri
ENSSDUG00000008631	farsa	92	91.176	ENSTTRG00000003599	FARSA	85	91.176	Tursiops_truncatus
ENSSDUG00000008631	farsa	100	76.056	ENSUAMG00000010230	FARSA	98	76.056	Ursus_americanus
ENSSDUG00000008631	farsa	100	76.056	ENSUMAG00000006110	FARSA	98	76.056	Ursus_maritimus
ENSSDUG00000008631	farsa	100	76.861	ENSVVUG00000024145	FARSA	98	76.861	Vulpes_vulpes
ENSSDUG00000008631	farsa	100	78.313	ENSXETG00000007936	farsa	100	78.313	Xenopus_tropicalis
ENSSDUG00000008631	farsa	100	81.325	ENSXCOG00000015512	farsa	100	81.325	Xiphophorus_couchianus
ENSSDUG00000008631	farsa	100	89.940	ENSXMAG00000008832	farsa	100	89.940	Xiphophorus_maculatus