EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000008646 (Gene tree)
Gene ID: 111222094
Gene Symbol: mrpl20
Alias: wu:fa27e09|zgc:153312
Full Name: mitochondrial ribosomal protein L20
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3359 bases
Position: chrBDQW01000089.1:119505-122863
Accession: 111222094
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000011868	Ribosomal_L20	PF00453.18	2.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000012085	-	2128	XM_022745660	ENSSDUP00000011868	149 (aa)	XP_022601381	UPI000BBE38DD

Gene Model

Click here to download ENSSDUG00000008646's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000008646	mrpl20	98	70.548	ENSG00000242485	MRPL20	98	70.548	Homo_sapiens
ENSSDUG00000008646	mrpl20	100	89.933	ENSAPOG00000011835	mrpl20	100	89.933	Acanthochromis_polyacanthus
ENSSDUG00000008646	mrpl20	88	75.573	ENSAMEG00000013932	MRPL20	88	75.573	Ailuropoda_melanoleuca
ENSSDUG00000008646	mrpl20	100	91.946	ENSACIG00000019179	mrpl20	100	91.946	Amphilophus_citrinellus
ENSSDUG00000008646	mrpl20	100	91.275	ENSAOCG00000007734	mrpl20	100	91.275	Amphiprion_ocellaris
ENSSDUG00000008646	mrpl20	100	90.604	ENSAPEG00000014049	mrpl20	100	90.604	Amphiprion_percula
ENSSDUG00000008646	mrpl20	100	89.933	ENSATEG00000007369	mrpl20	100	89.933	Anabas_testudineus
ENSSDUG00000008646	mrpl20	98	64.384	ENSACAG00000009143	MRPL20	98	64.384	Anolis_carolinensis
ENSSDUG00000008646	mrpl20	86	68.750	ENSANAG00000021078	-	84	68.750	Aotus_nancymaae
ENSSDUG00000008646	mrpl20	93	91.304	ENSACLG00000021726	mrpl20	88	91.304	Astatotilapia_calliptera
ENSSDUG00000008646	mrpl20	81	79.339	ENSAMXG00000035403	mrpl20	86	79.339	Astyanax_mexicanus
ENSSDUG00000008646	mrpl20	97	68.966	ENSBTAG00000004872	MRPL20	73	68.966	Bos_taurus
ENSSDUG00000008646	mrpl20	64	32.990	WBGene00012992	mrpl-20	50	32.990	Caenorhabditis_elegans
ENSSDUG00000008646	mrpl20	98	69.863	ENSCJAG00000039231	-	98	69.863	Callithrix_jacchus
ENSSDUG00000008646	mrpl20	98	72.603	ENSCAFG00000019259	MRPL20	98	72.603	Canis_familiaris
ENSSDUG00000008646	mrpl20	72	69.444	ENSCAFG00020025880	-	63	69.444	Canis_lupus_dingo
ENSSDUG00000008646	mrpl20	97	68.966	ENSCHIG00000010545	MRPL20	97	68.966	Capra_hircus
ENSSDUG00000008646	mrpl20	98	73.973	ENSTSYG00000033620	MRPL20	98	73.973	Carlito_syrichta
ENSSDUG00000008646	mrpl20	98	69.863	ENSCPOG00000023001	MRPL20	98	69.863	Cavia_porcellus
ENSSDUG00000008646	mrpl20	98	70.548	ENSCCAG00000032768	-	98	70.548	Cebus_capucinus
ENSSDUG00000008646	mrpl20	84	60.800	ENSCATG00000040437	-	65	60.800	Cercocebus_atys
ENSSDUG00000008646	mrpl20	98	71.233	ENSCATG00000033927	MRPL20	98	71.233	Cercocebus_atys
ENSSDUG00000008646	mrpl20	98	48.630	ENSCLAG00000011866	-	97	48.630	Chinchilla_lanigera
ENSSDUG00000008646	mrpl20	98	69.178	ENSCLAG00000009757	-	98	69.178	Chinchilla_lanigera
ENSSDUG00000008646	mrpl20	98	71.233	ENSCSAG00000000688	-	98	71.233	Chlorocebus_sabaeus
ENSSDUG00000008646	mrpl20	98	69.863	ENSCSAG00000019479	-	98	69.863	Chlorocebus_sabaeus
ENSSDUG00000008646	mrpl20	98	69.178	ENSCPBG00000022905	MRPL20	98	69.178	Chrysemys_picta_bellii
ENSSDUG00000008646	mrpl20	98	54.110	ENSCANG00000039625	MRPL20	98	54.110	Colobus_angolensis_palliatus
ENSSDUG00000008646	mrpl20	98	70.548	ENSCGRG00001024028	Mrpl20	98	70.548	Cricetulus_griseus_chok1gshd
ENSSDUG00000008646	mrpl20	98	70.548	ENSCGRG00000007447	Mrpl20	98	70.548	Cricetulus_griseus_crigri
ENSSDUG00000008646	mrpl20	100	84.564	ENSCSEG00000002016	mrpl20	87	84.564	Cynoglossus_semilaevis
ENSSDUG00000008646	mrpl20	99	82.993	ENSCVAG00000022768	mrpl20	99	82.993	Cyprinodon_variegatus
ENSSDUG00000008646	mrpl20	100	77.181	ENSDARG00000090462	mrpl20	100	77.181	Danio_rerio
ENSSDUG00000008646	mrpl20	98	70.548	ENSDNOG00000044958	MRPL20	98	70.548	Dasypus_novemcinctus
ENSSDUG00000008646	mrpl20	54	67.500	ENSDORG00000028591	Mrpl20	96	67.500	Dipodomys_ordii
ENSSDUG00000008646	mrpl20	83	45.528	FBgn0036335	mRpL20	82	45.528	Drosophila_melanogaster
ENSSDUG00000008646	mrpl20	98	57.534	ENSETEG00000012315	MRPL20	98	57.534	Echinops_telfairi
ENSSDUG00000008646	mrpl20	97	63.448	ENSEBUG00000002214	mrpl20	97	63.448	Eptatretus_burgeri
ENSSDUG00000008646	mrpl20	98	71.233	ENSEASG00005014515	MRPL20	98	71.233	Equus_asinus_asinus
ENSSDUG00000008646	mrpl20	98	71.233	ENSECAG00000018364	MRPL20	98	71.233	Equus_caballus
ENSSDUG00000008646	mrpl20	79	52.991	ENSEEUG00000004596	-	98	52.991	Erinaceus_europaeus
ENSSDUG00000008646	mrpl20	100	85.235	ENSELUG00000013398	mrpl20	100	85.235	Esox_lucius
ENSSDUG00000008646	mrpl20	98	72.603	ENSFCAG00000033203	MRPL20	98	72.603	Felis_catus
ENSSDUG00000008646	mrpl20	98	65.753	ENSFALG00000009334	MRPL20	98	65.753	Ficedula_albicollis
ENSSDUG00000008646	mrpl20	98	69.863	ENSFDAG00000013320	MRPL20	98	69.863	Fukomys_damarensis
ENSSDUG00000008646	mrpl20	99	85.034	ENSFHEG00000004769	mrpl20	99	85.034	Fundulus_heteroclitus
ENSSDUG00000008646	mrpl20	97	84.028	ENSGMOG00000008125	mrpl20	100	84.028	Gadus_morhua
ENSSDUG00000008646	mrpl20	98	67.123	ENSGALG00000001542	MRPL20	98	67.123	Gallus_gallus
ENSSDUG00000008646	mrpl20	99	85.714	ENSGAFG00000021580	mrpl20	99	85.714	Gambusia_affinis
ENSSDUG00000008646	mrpl20	100	91.275	ENSGACG00000001134	mrpl20	100	91.275	Gasterosteus_aculeatus
ENSSDUG00000008646	mrpl20	98	68.493	ENSGAGG00000001945	MRPL20	98	68.493	Gopherus_agassizii
ENSSDUG00000008646	mrpl20	98	70.548	ENSGGOG00000027251	-	98	70.548	Gorilla_gorilla
ENSSDUG00000008646	mrpl20	100	91.275	ENSHBUG00000023626	mrpl20	100	91.275	Haplochromis_burtoni
ENSSDUG00000008646	mrpl20	98	67.808	ENSHGLG00000017538	MRPL20	98	67.808	Heterocephalus_glaber_female
ENSSDUG00000008646	mrpl20	98	68.493	ENSHGLG00100012816	MRPL20	98	68.493	Heterocephalus_glaber_male
ENSSDUG00000008646	mrpl20	100	80.537	ENSHCOG00000005830	mrpl20	100	80.537	Hippocampus_comes
ENSSDUG00000008646	mrpl20	100	79.195	ENSIPUG00000018055	mrpl20	100	79.195	Ictalurus_punctatus
ENSSDUG00000008646	mrpl20	98	71.233	ENSJJAG00000020728	Mrpl20	98	71.233	Jaculus_jaculus
ENSSDUG00000008646	mrpl20	100	80.537	ENSKMAG00000021650	mrpl20	100	80.537	Kryptolebias_marmoratus
ENSSDUG00000008646	mrpl20	100	91.275	ENSLBEG00000021562	mrpl20	100	91.275	Labrus_bergylta
ENSSDUG00000008646	mrpl20	98	78.082	ENSLACG00000019149	MRPL20	98	78.082	Latimeria_chalumnae
ENSSDUG00000008646	mrpl20	98	71.918	ENSLAFG00000010706	MRPL20	98	71.918	Loxodonta_africana
ENSSDUG00000008646	mrpl20	92	59.124	ENSMFAG00000046195	-	82	59.124	Macaca_fascicularis
ENSSDUG00000008646	mrpl20	98	71.233	ENSMFAG00000043214	MRPL20	98	71.233	Macaca_fascicularis
ENSSDUG00000008646	mrpl20	65	71.134	ENSMMUG00000038877	MRPL20	74	71.134	Macaca_mulatta
ENSSDUG00000008646	mrpl20	89	60.150	ENSMNEG00000000027	-	68	60.150	Macaca_nemestrina
ENSSDUG00000008646	mrpl20	98	71.233	ENSMNEG00000041891	MRPL20	98	71.233	Macaca_nemestrina
ENSSDUG00000008646	mrpl20	87	60.465	ENSMLEG00000037605	-	79	60.465	Mandrillus_leucophaeus
ENSSDUG00000008646	mrpl20	79	72.650	ENSMLEG00000037086	MRPL20	98	72.650	Mandrillus_leucophaeus
ENSSDUG00000008646	mrpl20	100	89.262	ENSMAMG00000023884	mrpl20	100	89.262	Mastacembelus_armatus
ENSSDUG00000008646	mrpl20	100	91.275	ENSMZEG00005011376	mrpl20	100	91.275	Maylandia_zebra
ENSSDUG00000008646	mrpl20	91	60.741	ENSMGAG00000002774	MRPL20	91	60.741	Meleagris_gallopavo
ENSSDUG00000008646	mrpl20	98	69.863	ENSMAUG00000013299	Mrpl20	98	69.863	Mesocricetus_auratus
ENSSDUG00000008646	mrpl20	98	73.288	ENSMICG00000041892	MRPL20	98	73.288	Microcebus_murinus
ENSSDUG00000008646	mrpl20	98	71.918	ENSMOCG00000000404	-	98	71.918	Microtus_ochrogaster
ENSSDUG00000008646	mrpl20	98	67.808	ENSMOCG00000009545	-	98	67.808	Microtus_ochrogaster
ENSSDUG00000008646	mrpl20	100	69.128	ENSMMOG00000021753	mrpl20	100	69.128	Mola_mola
ENSSDUG00000008646	mrpl20	100	61.745	ENSMODG00000006562	MRPL20	100	61.745	Monodelphis_domestica
ENSSDUG00000008646	mrpl20	100	88.591	ENSMALG00000018593	mrpl20	100	88.591	Monopterus_albus
ENSSDUG00000008646	mrpl20	98	71.918	MGP_CAROLIEiJ_G0026904	Mrpl20	97	73.118	Mus_caroli
ENSSDUG00000008646	mrpl20	98	72.603	ENSMUSG00000029066	Mrpl20	97	74.194	Mus_musculus
ENSSDUG00000008646	mrpl20	98	68.493	MGP_PahariEiJ_G0029252	Mrpl20	98	68.493	Mus_pahari
ENSSDUG00000008646	mrpl20	98	72.603	MGP_SPRETEiJ_G0027898	Mrpl20	97	74.194	Mus_spretus
ENSSDUG00000008646	mrpl20	98	69.863	ENSMLUG00000011857	MRPL20	98	69.863	Myotis_lucifugus
ENSSDUG00000008646	mrpl20	98	69.863	ENSNGAG00000021688	Mrpl20	98	69.892	Nannospalax_galili
ENSSDUG00000008646	mrpl20	100	91.275	ENSNBRG00000006018	mrpl20	100	91.275	Neolamprologus_brichardi
ENSSDUG00000008646	mrpl20	54	68.750	ENSNLEG00000013868	-	78	68.750	Nomascus_leucogenys
ENSSDUG00000008646	mrpl20	98	70.548	ENSODEG00000010734	MRPL20	98	70.548	Octodon_degus
ENSSDUG00000008646	mrpl20	100	91.946	ENSONIG00000018914	mrpl20	100	91.946	Oreochromis_niloticus
ENSSDUG00000008646	mrpl20	100	85.906	ENSORLG00000018304	mrpl20	100	85.906	Oryzias_latipes
ENSSDUG00000008646	mrpl20	100	85.906	ENSORLG00020009128	mrpl20	100	85.906	Oryzias_latipes_hni
ENSSDUG00000008646	mrpl20	100	85.906	ENSORLG00015005156	mrpl20	100	85.906	Oryzias_latipes_hsok
ENSSDUG00000008646	mrpl20	100	85.906	ENSOMEG00000015654	mrpl20	100	85.906	Oryzias_melastigma
ENSSDUG00000008646	mrpl20	98	70.548	ENSOGAG00000005968	MRPL20	98	70.548	Otolemur_garnettii
ENSSDUG00000008646	mrpl20	97	68.966	ENSOARG00000003529	MRPL20	97	68.966	Ovis_aries
ENSSDUG00000008646	mrpl20	98	70.548	ENSPPAG00000042350	-	98	70.548	Pan_paniscus
ENSSDUG00000008646	mrpl20	98	73.288	ENSPPRG00000009188	MRPL20	98	73.288	Panthera_pardus
ENSSDUG00000008646	mrpl20	54	70.000	ENSPTIG00000020769	MRPL20	88	70.000	Panthera_tigris_altaica
ENSSDUG00000008646	mrpl20	98	70.548	ENSPTRG00000000029	MRPL20	98	70.548	Pan_troglodytes
ENSSDUG00000008646	mrpl20	98	71.233	ENSPANG00000015802	MRPL20	98	71.233	Papio_anubis
ENSSDUG00000008646	mrpl20	92	56.934	ENSPANG00000036197	-	98	56.934	Papio_anubis
ENSSDUG00000008646	mrpl20	98	75.342	ENSPKIG00000002248	mrpl20	98	75.342	Paramormyrops_kingsleyae
ENSSDUG00000008646	mrpl20	93	61.594	ENSPSIG00000003939	MRPL20	97	61.594	Pelodiscus_sinensis
ENSSDUG00000008646	mrpl20	50	40.260	ENSPMGG00000022271	-	54	40.260	Periophthalmus_magnuspinnatus
ENSSDUG00000008646	mrpl20	100	91.275	ENSPMGG00000003966	mrpl20	100	91.275	Periophthalmus_magnuspinnatus
ENSSDUG00000008646	mrpl20	98	51.370	ENSPEMG00000009458	-	83	51.370	Peromyscus_maniculatus_bairdii
ENSSDUG00000008646	mrpl20	72	42.991	ENSPMAG00000009990	-	86	41.818	Petromyzon_marinus
ENSSDUG00000008646	mrpl20	98	65.753	ENSPCIG00000007747	MRPL20	98	65.753	Phascolarctos_cinereus
ENSSDUG00000008646	mrpl20	99	85.034	ENSPFOG00000018163	mrpl20	99	85.034	Poecilia_formosa
ENSSDUG00000008646	mrpl20	99	85.034	ENSPLAG00000016451	mrpl20	99	85.034	Poecilia_latipinna
ENSSDUG00000008646	mrpl20	99	85.714	ENSPMEG00000002561	mrpl20	99	85.714	Poecilia_mexicana
ENSSDUG00000008646	mrpl20	99	75.676	ENSPREG00000004925	mrpl20	99	76.351	Poecilia_reticulata
ENSSDUG00000008646	mrpl20	98	73.288	ENSPCAG00000001425	MRPL20	98	73.288	Procavia_capensis
ENSSDUG00000008646	mrpl20	98	73.973	ENSPCOG00000025653	-	98	73.973	Propithecus_coquereli
ENSSDUG00000008646	mrpl20	97	67.586	ENSPCOG00000004450	-	97	67.586	Propithecus_coquereli
ENSSDUG00000008646	mrpl20	100	91.275	ENSPNYG00000008626	mrpl20	100	91.275	Pundamilia_nyererei
ENSSDUG00000008646	mrpl20	100	80.537	ENSPNAG00000016694	mrpl20	100	80.537	Pygocentrus_nattereri
ENSSDUG00000008646	mrpl20	98	70.548	ENSRNOG00000018647	Mrpl20	98	70.548	Rattus_norvegicus
ENSSDUG00000008646	mrpl20	98	70.548	ENSRBIG00000042278	MRPL20	98	70.548	Rhinopithecus_bieti
ENSSDUG00000008646	mrpl20	98	70.548	ENSRROG00000003574	MRPL20	98	70.548	Rhinopithecus_roxellana
ENSSDUG00000008646	mrpl20	54	65.000	ENSSBOG00000035454	-	96	65.000	Saimiri_boliviensis_boliviensis
ENSSDUG00000008646	mrpl20	100	57.419	ENSSHAG00000008197	MRPL20	100	57.419	Sarcophilus_harrisii
ENSSDUG00000008646	mrpl20	98	76.027	ENSSFOG00015016009	mrpl20	98	76.027	Scleropages_formosus
ENSSDUG00000008646	mrpl20	100	93.289	ENSSMAG00000000214	mrpl20	100	93.289	Scophthalmus_maximus
ENSSDUG00000008646	mrpl20	100	98.658	ENSSLDG00000023171	mrpl20	100	98.658	Seriola_lalandi_dorsalis
ENSSDUG00000008646	mrpl20	98	67.123	ENSSPUG00000016911	MRPL20	98	67.123	Sphenodon_punctatus
ENSSDUG00000008646	mrpl20	100	91.946	ENSSPAG00000012887	mrpl20	100	91.946	Stegastes_partitus
ENSSDUG00000008646	mrpl20	98	71.918	ENSSSCG00000033374	MRPL20	98	71.918	Sus_scrofa
ENSSDUG00000008646	mrpl20	79	65.254	ENSTGUG00000003113	MRPL20	96	65.254	Taeniopygia_guttata
ENSSDUG00000008646	mrpl20	99	85.714	ENSTRUG00000021410	mrpl20	99	85.714	Takifugu_rubripes
ENSSDUG00000008646	mrpl20	99	88.435	ENSTNIG00000014657	mrpl20	99	88.435	Tetraodon_nigroviridis
ENSSDUG00000008646	mrpl20	98	73.288	ENSTBEG00000008735	MRPL20	98	73.288	Tupaia_belangeri
ENSSDUG00000008646	mrpl20	78	70.690	ENSTTRG00000017046	MRPL20	97	70.690	Tursiops_truncatus
ENSSDUG00000008646	mrpl20	98	73.973	ENSUAMG00000012829	-	100	74.227	Ursus_americanus
ENSSDUG00000008646	mrpl20	77	55.263	ENSUAMG00000028406	-	73	55.263	Ursus_americanus
ENSSDUG00000008646	mrpl20	78	54.310	ENSUMAG00000003240	-	74	54.310	Ursus_maritimus
ENSSDUG00000008646	mrpl20	54	68.750	ENSUMAG00000001917	-	70	68.750	Ursus_maritimus
ENSSDUG00000008646	mrpl20	53	68.354	ENSVPAG00000001846	-	95	68.354	Vicugna_pacos
ENSSDUG00000008646	mrpl20	98	73.288	ENSVVUG00000004455	MRPL20	98	73.288	Vulpes_vulpes
ENSSDUG00000008646	mrpl20	98	75.342	ENSXETG00000011118	mrpl20	98	75.342	Xenopus_tropicalis
ENSSDUG00000008646	mrpl20	99	83.673	ENSXCOG00000004220	mrpl20	99	83.673	Xiphophorus_couchianus
ENSSDUG00000008646	mrpl20	99	83.673	ENSXMAG00000016652	mrpl20	99	83.673	Xiphophorus_maculatus