EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000008705 (Gene tree)
Gene ID: 111229991
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 11454 bases
Position: chrBDQW01000258.1:1191999-1203452
Accession: 111229991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000011990	Fox-1_C	PF12414.8	5.8e-27	1	1
ENSSDUP00000011990	RRM_1	PF00076.22	9.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000012208	-	1158	XM_022756517	ENSSDUP00000011990	385 (aa)	XP_022612238	-

Gene Model

Click here to download ENSSDUG00000008705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008705's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000008705	rbfox1l	93	48.737	ENSSDUG00000016413	rbfox1	84	52.663
ENSSDUG00000008705	rbfox1l	89	50.142	ENSSDUG00000015801	-	78	54.785
ENSSDUG00000008705	rbfox1l	63	60.606	ENSSDUG00000004292	rbfox2	56	60.536
ENSSDUG00000008705	rbfox1l	63	57.795	ENSSDUG00000009511	-	56	58.427
ENSSDUG00000008705	rbfox1l	85	47.561	ENSSDUG00000023183	rbfox3b	94	47.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000008705	rbfox1l	97	87.268	ENSAPOG00000016304	rbfox1l	98	85.942	Acanthochromis_polyacanthus
ENSSDUG00000008705	rbfox1l	100	83.463	ENSACIG00000006441	rbfox1l	100	83.463	Amphilophus_citrinellus
ENSSDUG00000008705	rbfox1l	83	85.802	ENSAOCG00000020938	rbfox1l	94	82.822	Amphiprion_ocellaris
ENSSDUG00000008705	rbfox1l	100	87.918	ENSAPEG00000008232	rbfox1l	100	86.632	Amphiprion_percula
ENSSDUG00000008705	rbfox1l	100	90.390	ENSATEG00000022649	rbfox1l	100	90.390	Anabas_testudineus
ENSSDUG00000008705	rbfox1l	64	71.260	ENSACAG00000011931	-	89	69.880	Anolis_carolinensis
ENSSDUG00000008705	rbfox1l	100	86.889	ENSACLG00000021394	rbfox1l	100	87.147	Astatotilapia_calliptera
ENSSDUG00000008705	rbfox1l	100	85.825	ENSAMXG00000010470	rbfox1l	100	83.505	Astyanax_mexicanus
ENSSDUG00000008705	rbfox1l	100	53.015	ENSCPBG00000010944	-	100	53.713	Chrysemys_picta_bellii
ENSSDUG00000008705	rbfox1l	100	88.083	ENSCSEG00000018898	rbfox1l	100	88.342	Cynoglossus_semilaevis
ENSSDUG00000008705	rbfox1l	100	85.604	ENSCVAG00000007986	rbfox1l	100	84.833	Cyprinodon_variegatus
ENSSDUG00000008705	rbfox1l	100	81.347	ENSDARG00000021184	rbfox1l	100	81.959	Danio_rerio
ENSSDUG00000008705	rbfox1l	100	80.964	ENSELUG00000015077	rbfox1l	100	80.964	Esox_lucius
ENSSDUG00000008705	rbfox1l	78	95.122	ENSFHEG00000016557	rbfox1l	95	95.122	Fundulus_heteroclitus
ENSSDUG00000008705	rbfox1l	100	80.977	ENSGMOG00000005040	rbfox1l	100	81.234	Gadus_morhua
ENSSDUG00000008705	rbfox1l	92	83.889	ENSGAFG00000013211	rbfox1l	97	83.889	Gambusia_affinis
ENSSDUG00000008705	rbfox1l	100	86.889	ENSGACG00000010757	rbfox1l	100	86.889	Gasterosteus_aculeatus
ENSSDUG00000008705	rbfox1l	65	66.667	ENSGAGG00000012440	-	84	69.512	Gopherus_agassizii
ENSSDUG00000008705	rbfox1l	100	86.889	ENSHBUG00000013406	rbfox1l	100	87.147	Haplochromis_burtoni
ENSSDUG00000008705	rbfox1l	100	83.846	ENSHCOG00000020771	rbfox1l	100	82.051	Hippocampus_comes
ENSSDUG00000008705	rbfox1l	99	77.083	ENSIPUG00000000065	rbfox1l	99	76.731	Ictalurus_punctatus
ENSSDUG00000008705	rbfox1l	100	84.655	ENSKMAG00000005146	rbfox1l	100	84.103	Kryptolebias_marmoratus
ENSSDUG00000008705	rbfox1l	100	89.974	ENSLBEG00000017089	rbfox1l	100	90.231	Labrus_bergylta
ENSSDUG00000008705	rbfox1l	100	88.432	ENSMAMG00000019480	rbfox1l	100	88.689	Mastacembelus_armatus
ENSSDUG00000008705	rbfox1l	100	86.889	ENSMZEG00005016374	rbfox1l	100	87.147	Maylandia_zebra
ENSSDUG00000008705	rbfox1l	100	88.312	ENSMMOG00000016530	rbfox1l	100	86.494	Mola_mola
ENSSDUG00000008705	rbfox1l	100	86.494	ENSMALG00000009384	rbfox1l	100	86.494	Monopterus_albus
ENSSDUG00000008705	rbfox1l	100	88.083	ENSNBRG00000003346	rbfox1l	100	88.342	Neolamprologus_brichardi
ENSSDUG00000008705	rbfox1l	100	87.404	ENSONIG00000012754	rbfox1l	100	87.661	Oreochromis_niloticus
ENSSDUG00000008705	rbfox1l	100	85.641	ENSORLG00000011269	rbfox1l	100	84.319	Oryzias_latipes
ENSSDUG00000008705	rbfox1l	100	86.375	ENSORLG00020000162	rbfox1l	100	85.090	Oryzias_latipes_hni
ENSSDUG00000008705	rbfox1l	100	86.118	ENSORLG00015013464	rbfox1l	100	84.833	Oryzias_latipes_hsok
ENSSDUG00000008705	rbfox1l	100	87.147	ENSOMEG00000010584	rbfox1l	100	85.861	Oryzias_melastigma
ENSSDUG00000008705	rbfox1l	100	87.047	ENSPKIG00000012029	rbfox1l	100	84.935	Paramormyrops_kingsleyae
ENSSDUG00000008705	rbfox1l	100	78.182	ENSPMGG00000012082	rbfox1l	100	76.623	Periophthalmus_magnuspinnatus
ENSSDUG00000008705	rbfox1l	100	85.604	ENSPFOG00000009338	rbfox1l	100	85.861	Poecilia_formosa
ENSSDUG00000008705	rbfox1l	85	75.976	ENSPLAG00000012816	rbfox1l	99	75.976	Poecilia_latipinna
ENSSDUG00000008705	rbfox1l	100	84.576	ENSPMEG00000017597	rbfox1l	100	83.805	Poecilia_mexicana
ENSSDUG00000008705	rbfox1l	100	84.576	ENSPREG00000007940	rbfox1l	100	83.805	Poecilia_reticulata
ENSSDUG00000008705	rbfox1l	100	86.632	ENSPNYG00000002098	rbfox1l	100	86.889	Pundamilia_nyererei
ENSSDUG00000008705	rbfox1l	100	81.748	ENSPNAG00000001620	rbfox1l	100	79.692	Pygocentrus_nattereri
ENSSDUG00000008705	rbfox1l	100	81.088	ENSSFOG00015000675	rbfox1l	100	81.347	Scleropages_formosus
ENSSDUG00000008705	rbfox1l	100	88.175	ENSSMAG00000013090	rbfox1l	100	88.432	Scophthalmus_maximus
ENSSDUG00000008705	rbfox1l	100	99.223	ENSSLDG00000022256	rbfox1l	100	99.223	Seriola_lalandi_dorsalis
ENSSDUG00000008705	rbfox1l	100	88.432	ENSSPAG00000016620	rbfox1l	100	87.147	Stegastes_partitus
ENSSDUG00000008705	rbfox1l	96	83.333	ENSTRUG00000015905	rbfox1l	100	83.333	Takifugu_rubripes
ENSSDUG00000008705	rbfox1l	65	78.148	ENSTNIG00000008088	rbfox1l	97	78.707	Tetraodon_nigroviridis
ENSSDUG00000008705	rbfox1l	100	85.604	ENSXMAG00000023471	rbfox1l	100	85.861	Xiphophorus_maculatus