EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000008785 (Gene tree)
Gene ID: 111226746
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 8027 bases
Position: chrBDQW01000161.1:2055869-2063895
Accession: 111226746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000012087	zf-RNPHF	PF08080.12	8.3e-09	1	1
ENSSDUP00000012087	RRM_1	PF00076.22	1.4e-31	1	3
ENSSDUP00000012087	RRM_1	PF00076.22	1.4e-31	2	3
ENSSDUP00000012087	RRM_1	PF00076.22	1.4e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000012305	-	4037	XM_022752053	ENSSDUP00000012087	407 (aa)	XP_022607774	UPI00054BC7FF

Gene Model

Click here to download ENSSDUG00000008785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008785's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000008785	hnrnph1	94	61.230	ENSSDUG00000000160	hnrnph3	93	60.705
ENSSDUG00000008785	hnrnph1	80	41.411	ENSSDUG00000009397	-	92	40.979

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000008785	hnrnph1	100	99.509	ENSAPOG00000016614	hnrnph1	100	99.509	Acanthochromis_polyacanthus
ENSSDUG00000008785	hnrnph1	92	98.670	ENSACIG00000008964	hnrnph1	98	98.670	Amphilophus_citrinellus
ENSSDUG00000008785	hnrnph1	100	100.000	ENSAOCG00000008372	hnrnph1	100	100.000	Amphiprion_ocellaris
ENSSDUG00000008785	hnrnph1	100	99.754	ENSAPEG00000012980	hnrnph1	100	99.754	Amphiprion_percula
ENSSDUG00000008785	hnrnph1	100	99.754	ENSATEG00000002792	hnrnph1	100	99.754	Anabas_testudineus
ENSSDUG00000008785	hnrnph1	99	71.018	ENSACAG00000016323	-	91	75.300	Anolis_carolinensis
ENSSDUG00000008785	hnrnph1	84	94.382	ENSACLG00000003313	hnrnph1	97	94.382	Astatotilapia_calliptera
ENSSDUG00000008785	hnrnph1	100	84.466	ENSAMXG00000002483	hnrnph1	99	89.182	Astyanax_mexicanus
ENSSDUG00000008785	hnrnph1	99	83.578	ENSAMXG00000030703	hnrnph1l	84	83.824	Astyanax_mexicanus
ENSSDUG00000008785	hnrnph1	100	96.822	ENSCSEG00000015891	hnrnph1	100	96.822	Cynoglossus_semilaevis
ENSSDUG00000008785	hnrnph1	100	96.806	ENSCVAG00000014097	hnrnph1	100	96.806	Cyprinodon_variegatus
ENSSDUG00000008785	hnrnph1	93	88.158	ENSDARG00000040881	hnrnph1	94	88.684	Danio_rerio
ENSSDUG00000008785	hnrnph1	95	88.946	ENSDARG00000005551	hnrnph1l	99	86.029	Danio_rerio
ENSSDUG00000008785	hnrnph1	96	85.526	ENSELUG00000021437	-	99	88.158	Esox_lucius
ENSSDUG00000008785	hnrnph1	100	86.761	ENSELUG00000006715	hnrnph1	94	88.205	Esox_lucius
ENSSDUG00000008785	hnrnph1	100	94.840	ENSFHEG00000008474	hnrnph1	100	93.366	Fundulus_heteroclitus
ENSSDUG00000008785	hnrnph1	96	89.059	ENSGMOG00000006782	hnrnph1	97	89.059	Gadus_morhua
ENSSDUG00000008785	hnrnph1	100	98.034	ENSGAFG00000006280	hnrnph1	100	98.034	Gambusia_affinis
ENSSDUG00000008785	hnrnph1	100	93.366	ENSGACG00000018352	hnrnph1	99	91.019	Gasterosteus_aculeatus
ENSSDUG00000008785	hnrnph1	84	94.382	ENSHBUG00000010547	hnrnph1	98	94.382	Haplochromis_burtoni
ENSSDUG00000008785	hnrnph1	100	85.511	ENSHCOG00000004513	hnrnph1	100	88.836	Hippocampus_comes
ENSSDUG00000008785	hnrnph1	100	83.252	ENSIPUG00000018262	hnrnph1	100	84.223	Ictalurus_punctatus
ENSSDUG00000008785	hnrnph1	95	84.319	ENSIPUG00000024047	hnrnph1l	90	86.016	Ictalurus_punctatus
ENSSDUG00000008785	hnrnph1	100	96.341	ENSKMAG00000018802	hnrnph1	100	96.341	Kryptolebias_marmoratus
ENSSDUG00000008785	hnrnph1	100	98.034	ENSLBEG00000027811	hnrnph1	100	98.034	Labrus_bergylta
ENSSDUG00000008785	hnrnph1	94	83.871	ENSLOCG00000012510	hnrnph1	91	83.127	Lepisosteus_oculatus
ENSSDUG00000008785	hnrnph1	99	55.245	ENSMMUG00000017392	-	83	57.766	Macaca_mulatta
ENSSDUG00000008785	hnrnph1	99	54.965	ENSMNEG00000030544	-	83	57.766	Macaca_nemestrina
ENSSDUG00000008785	hnrnph1	86	92.473	ENSMAMG00000011478	hnrnph1	99	92.473	Mastacembelus_armatus
ENSSDUG00000008785	hnrnph1	100	98.280	ENSMZEG00005009791	hnrnph1	100	98.280	Maylandia_zebra
ENSSDUG00000008785	hnrnph1	92	95.526	ENSMMOG00000009064	hnrnph1	98	95.526	Mola_mola
ENSSDUG00000008785	hnrnph1	74	52.553	ENSMODG00000002200	-	99	51.952	Monodelphis_domestica
ENSSDUG00000008785	hnrnph1	93	94.722	ENSMALG00000003999	hnrnph1	99	94.722	Monopterus_albus
ENSSDUG00000008785	hnrnph1	84	94.382	ENSNBRG00000015406	hnrnph1	98	94.382	Neolamprologus_brichardi
ENSSDUG00000008785	hnrnph1	100	98.526	ENSONIG00000017754	hnrnph1	100	98.526	Oreochromis_niloticus
ENSSDUG00000008785	hnrnph1	100	96.126	ENSORLG00000006932	hnrnph1	100	96.126	Oryzias_latipes
ENSSDUG00000008785	hnrnph1	100	96.126	ENSORLG00020007881	hnrnph1	100	96.126	Oryzias_latipes_hni
ENSSDUG00000008785	hnrnph1	100	96.126	ENSORLG00015005306	hnrnph1	100	96.126	Oryzias_latipes_hsok
ENSSDUG00000008785	hnrnph1	100	98.284	ENSOMEG00000009827	hnrnph1	100	98.284	Oryzias_melastigma
ENSSDUG00000008785	hnrnph1	100	88.835	ENSPKIG00000018203	hnrnph1l	100	86.829	Paramormyrops_kingsleyae
ENSSDUG00000008785	hnrnph1	93	82.836	ENSPKIG00000009532	-	93	81.841	Paramormyrops_kingsleyae
ENSSDUG00000008785	hnrnph1	100	95.086	ENSPMGG00000012151	hnrnph1	100	95.086	Periophthalmus_magnuspinnatus
ENSSDUG00000008785	hnrnph1	100	98.034	ENSPFOG00000004097	hnrnph1	100	98.034	Poecilia_formosa
ENSSDUG00000008785	hnrnph1	100	98.034	ENSPLAG00000011771	hnrnph1	100	98.034	Poecilia_latipinna
ENSSDUG00000008785	hnrnph1	100	98.280	ENSPMEG00000019446	hnrnph1	100	98.280	Poecilia_mexicana
ENSSDUG00000008785	hnrnph1	100	98.280	ENSPREG00000005780	hnrnph1	100	98.280	Poecilia_reticulata
ENSSDUG00000008785	hnrnph1	100	98.280	ENSPNYG00000000204	hnrnph1	100	98.280	Pundamilia_nyererei
ENSSDUG00000008785	hnrnph1	99	84.841	ENSPNAG00000002784	hnrnph1l	99	84.069	Pygocentrus_nattereri
ENSSDUG00000008785	hnrnph1	100	83.981	ENSPNAG00000000439	hnrnph1	100	86.165	Pygocentrus_nattereri
ENSSDUG00000008785	hnrnph1	98	91.022	ENSSFOG00015022796	hnrnph1l	99	90.026	Scleropages_formosus
ENSSDUG00000008785	hnrnph1	97	88.945	ENSSFOG00015016055	-	94	90.551	Scleropages_formosus
ENSSDUG00000008785	hnrnph1	96	92.443	ENSSMAG00000007820	hnrnph1	96	95.538	Scophthalmus_maximus
ENSSDUG00000008785	hnrnph1	100	100.000	ENSSLDG00000010685	hnrnph1	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000008785	hnrnph1	100	99.263	ENSSPAG00000009921	hnrnph1	100	99.263	Stegastes_partitus
ENSSDUG00000008785	hnrnph1	100	96.314	ENSTRUG00000020069	hnrnph1	100	96.314	Takifugu_rubripes
ENSSDUG00000008785	hnrnph1	99	73.288	ENSXETG00000018321	hnrnph1	85	78.706	Xenopus_tropicalis
ENSSDUG00000008785	hnrnph1	93	94.629	ENSXCOG00000009133	hnrnph1	97	94.629	Xiphophorus_couchianus
ENSSDUG00000008785	hnrnph1	92	98.404	ENSXMAG00000021332	hnrnph1	99	98.404	Xiphophorus_maculatus