EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000008924 (Gene tree)
Gene ID: 111232659
Gene Symbol: thoc3
Alias: zgc:100815
Full Name: THO complex 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 4910 bases
Position: chrBDQW01000331.1:13009919-13014828
Accession: 111232659
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000012260	eIF2A	PF08662.11	3.1e-13	1	2
ENSSDUP00000012260	eIF2A	PF08662.11	3.1e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000012480	-	1784	XM_022760275	ENSSDUP00000012260	322 (aa)	XP_022615996	UPI000BBE85CD

Gene Model

Click here to download ENSSDUG00000008924's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03013	RNA transport	KEGG
sdu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000008924's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000008924	thoc3	99	92.812	ENSG00000051596	THOC3	91	92.812	Homo_sapiens
ENSSDUG00000008924	thoc3	100	99.379	ENSAPOG00000010591	thoc3	100	99.379	Acanthochromis_polyacanthus
ENSSDUG00000008924	thoc3	99	92.812	ENSAMEG00000006936	THOC3	91	92.812	Ailuropoda_melanoleuca
ENSSDUG00000008924	thoc3	100	98.447	ENSACIG00000010364	thoc3	100	98.447	Amphilophus_citrinellus
ENSSDUG00000008924	thoc3	100	99.068	ENSAOCG00000013548	thoc3	100	99.068	Amphiprion_ocellaris
ENSSDUG00000008924	thoc3	100	99.068	ENSAPEG00000003216	thoc3	100	99.068	Amphiprion_percula
ENSSDUG00000008924	thoc3	100	99.379	ENSATEG00000017937	thoc3	100	99.379	Anabas_testudineus
ENSSDUG00000008924	thoc3	99	92.812	ENSANAG00000036291	THOC3	91	92.812	Aotus_nancymaae
ENSSDUG00000008924	thoc3	100	98.758	ENSACLG00000017219	thoc3	100	98.758	Astatotilapia_calliptera
ENSSDUG00000008924	thoc3	100	95.342	ENSAMXG00000010750	thoc3	100	95.342	Astyanax_mexicanus
ENSSDUG00000008924	thoc3	99	92.812	ENSBTAG00000035174	THOC3	91	92.812	Bos_taurus
ENSSDUG00000008924	thoc3	99	92.188	ENSCJAG00000046031	THOC3	86	92.188	Callithrix_jacchus
ENSSDUG00000008924	thoc3	99	92.812	ENSCAFG00000014320	THOC3	91	92.812	Canis_familiaris
ENSSDUG00000008924	thoc3	99	92.812	ENSCAFG00020011477	THOC3	91	92.812	Canis_lupus_dingo
ENSSDUG00000008924	thoc3	99	92.812	ENSCHIG00000021665	THOC3	91	92.812	Capra_hircus
ENSSDUG00000008924	thoc3	97	71.154	ENSTSYG00000009507	-	91	71.154	Carlito_syrichta
ENSSDUG00000008924	thoc3	99	73.668	ENSCPOG00000025805	THOC3	89	76.803	Cavia_porcellus
ENSSDUG00000008924	thoc3	99	92.812	ENSCATG00000029038	THOC3	91	92.812	Cercocebus_atys
ENSSDUG00000008924	thoc3	99	93.103	ENSCLAG00000015924	THOC3	91	93.103	Chinchilla_lanigera
ENSSDUG00000008924	thoc3	99	92.812	ENSCSAG00000009454	THOC3	91	92.812	Chlorocebus_sabaeus
ENSSDUG00000008924	thoc3	82	95.833	ENSCPBG00000022672	THOC3	81	95.833	Chrysemys_picta_bellii
ENSSDUG00000008924	thoc3	98	68.889	ENSCSAVG00000011041	-	99	68.889	Ciona_savignyi
ENSSDUG00000008924	thoc3	99	92.812	ENSCANG00000008964	THOC3	91	92.812	Colobus_angolensis_palliatus
ENSSDUG00000008924	thoc3	99	93.125	ENSCGRG00001022944	Thoc3	84	93.125	Cricetulus_griseus_chok1gshd
ENSSDUG00000008924	thoc3	99	93.125	ENSCGRG00000012133	Thoc3	91	93.125	Cricetulus_griseus_crigri
ENSSDUG00000008924	thoc3	100	97.205	ENSCVAG00000006941	thoc3	100	97.205	Cyprinodon_variegatus
ENSSDUG00000008924	thoc3	100	95.342	ENSDARG00000056517	thoc3	100	95.342	Danio_rerio
ENSSDUG00000008924	thoc3	99	93.125	ENSDNOG00000037214	THOC3	91	93.125	Dasypus_novemcinctus
ENSSDUG00000008924	thoc3	81	95.802	ENSDORG00000014084	Thoc3	89	95.802	Dipodomys_ordii
ENSSDUG00000008924	thoc3	98	63.810	FBgn0037569	tex	98	63.810	Drosophila_melanogaster
ENSSDUG00000008924	thoc3	99	92.188	ENSETEG00000020137	THOC3	91	92.188	Echinops_telfairi
ENSSDUG00000008924	thoc3	100	84.568	ENSEBUG00000004516	thoc3	100	84.568	Eptatretus_burgeri
ENSSDUG00000008924	thoc3	99	92.812	ENSEASG00005011970	THOC3	91	92.812	Equus_asinus_asinus
ENSSDUG00000008924	thoc3	99	92.812	ENSECAG00000011555	THOC3	91	92.812	Equus_caballus
ENSSDUG00000008924	thoc3	100	95.652	ENSELUG00000022058	thoc3	100	95.652	Esox_lucius
ENSSDUG00000008924	thoc3	99	93.750	ENSFALG00000008536	THOC3	94	93.750	Ficedula_albicollis
ENSSDUG00000008924	thoc3	99	93.103	ENSFDAG00000015062	THOC3	91	93.103	Fukomys_damarensis
ENSSDUG00000008924	thoc3	100	97.826	ENSFHEG00000019958	thoc3	100	97.826	Fundulus_heteroclitus
ENSSDUG00000008924	thoc3	100	95.963	ENSGMOG00000019136	-	100	95.963	Gadus_morhua
ENSSDUG00000008924	thoc3	98	92.744	ENSGALG00000024172	THOC3	83	92.744	Gallus_gallus
ENSSDUG00000008924	thoc3	100	97.516	ENSGAFG00000016531	thoc3	98	97.516	Gambusia_affinis
ENSSDUG00000008924	thoc3	100	97.516	ENSGACG00000016353	thoc3	100	97.516	Gasterosteus_aculeatus
ENSSDUG00000008924	thoc3	99	93.438	ENSGAGG00000013237	THOC3	99	93.438	Gopherus_agassizii
ENSSDUG00000008924	thoc3	99	92.812	ENSGGOG00000012127	-	91	92.812	Gorilla_gorilla
ENSSDUG00000008924	thoc3	100	98.758	ENSHBUG00000023812	thoc3	100	98.758	Haplochromis_burtoni
ENSSDUG00000008924	thoc3	99	92.812	ENSHGLG00000008773	THOC3	91	92.812	Heterocephalus_glaber_female
ENSSDUG00000008924	thoc3	99	92.812	ENSHGLG00100013354	THOC3	91	92.812	Heterocephalus_glaber_male
ENSSDUG00000008924	thoc3	100	91.304	ENSHCOG00000003522	thoc3	100	91.304	Hippocampus_comes
ENSSDUG00000008924	thoc3	100	95.963	ENSIPUG00000001292	thoc3	95	95.963	Ictalurus_punctatus
ENSSDUG00000008924	thoc3	99	92.188	ENSJJAG00000010704	Thoc3	91	92.188	Jaculus_jaculus
ENSSDUG00000008924	thoc3	100	97.205	ENSKMAG00000017815	thoc3	100	97.205	Kryptolebias_marmoratus
ENSSDUG00000008924	thoc3	100	97.826	ENSLBEG00000006512	thoc3	100	97.826	Labrus_bergylta
ENSSDUG00000008924	thoc3	100	95.031	ENSLACG00000014556	THOC3	100	95.031	Latimeria_chalumnae
ENSSDUG00000008924	thoc3	100	97.516	ENSLOCG00000011610	thoc3	99	97.516	Lepisosteus_oculatus
ENSSDUG00000008924	thoc3	99	92.812	ENSLAFG00000016609	THOC3	91	92.812	Loxodonta_africana
ENSSDUG00000008924	thoc3	99	92.812	ENSMFAG00000034476	THOC3	91	92.812	Macaca_fascicularis
ENSSDUG00000008924	thoc3	99	92.812	ENSMMUG00000018737	THOC3	91	92.812	Macaca_mulatta
ENSSDUG00000008924	thoc3	99	92.812	ENSMNEG00000043023	THOC3	91	92.812	Macaca_nemestrina
ENSSDUG00000008924	thoc3	99	92.812	ENSMLEG00000002508	THOC3	91	92.812	Mandrillus_leucophaeus
ENSSDUG00000008924	thoc3	100	99.379	ENSMAMG00000013229	thoc3	100	99.060	Mastacembelus_armatus
ENSSDUG00000008924	thoc3	100	98.758	ENSMZEG00005020327	thoc3	100	98.758	Maylandia_zebra
ENSSDUG00000008924	thoc3	82	96.958	ENSMGAG00000004766	THOC3	99	96.958	Meleagris_gallopavo
ENSSDUG00000008924	thoc3	99	93.125	ENSMAUG00000011225	Thoc3	91	93.125	Mesocricetus_auratus
ENSSDUG00000008924	thoc3	99	93.125	ENSMICG00000028441	-	91	93.125	Microcebus_murinus
ENSSDUG00000008924	thoc3	99	81.562	ENSMICG00000031354	-	91	81.562	Microcebus_murinus
ENSSDUG00000008924	thoc3	99	93.125	ENSMOCG00000015290	Thoc3	91	93.125	Microtus_ochrogaster
ENSSDUG00000008924	thoc3	100	98.447	ENSMMOG00000000373	thoc3	100	98.447	Mola_mola
ENSSDUG00000008924	thoc3	99	93.125	ENSMODG00000005339	THOC3	91	93.125	Monodelphis_domestica
ENSSDUG00000008924	thoc3	99	75.000	ENSMODG00000025275	-	97	75.000	Monodelphis_domestica
ENSSDUG00000008924	thoc3	100	97.826	ENSMALG00000002645	thoc3	100	97.826	Monopterus_albus
ENSSDUG00000008924	thoc3	99	93.125	MGP_CAROLIEiJ_G0018534	Thoc3	91	93.125	Mus_caroli
ENSSDUG00000008924	thoc3	99	93.125	ENSMUSG00000025872	Thoc3	91	93.125	Mus_musculus
ENSSDUG00000008924	thoc3	99	93.125	MGP_PahariEiJ_G0019599	Thoc3	91	93.125	Mus_pahari
ENSSDUG00000008924	thoc3	99	93.125	MGP_SPRETEiJ_G0019414	Thoc3	91	93.125	Mus_spretus
ENSSDUG00000008924	thoc3	85	91.606	ENSMPUG00000012598	THOC3	77	91.606	Mustela_putorius_furo
ENSSDUG00000008924	thoc3	99	93.125	ENSMLUG00000005412	-	91	93.125	Myotis_lucifugus
ENSSDUG00000008924	thoc3	99	89.375	ENSMLUG00000027411	-	93	89.375	Myotis_lucifugus
ENSSDUG00000008924	thoc3	99	86.875	ENSMLUG00000026903	-	93	86.875	Myotis_lucifugus
ENSSDUG00000008924	thoc3	99	93.125	ENSNGAG00000010934	-	91	93.125	Nannospalax_galili
ENSSDUG00000008924	thoc3	99	98.131	ENSNBRG00000013917	thoc3	93	98.131	Neolamprologus_brichardi
ENSSDUG00000008924	thoc3	99	92.500	ENSNLEG00000000593	THOC3	91	92.500	Nomascus_leucogenys
ENSSDUG00000008924	thoc3	99	93.125	ENSMEUG00000001068	THOC3	91	93.125	Notamacropus_eugenii
ENSSDUG00000008924	thoc3	98	70.032	ENSMEUG00000013439	-	98	70.032	Notamacropus_eugenii
ENSSDUG00000008924	thoc3	99	93.103	ENSODEG00000010186	THOC3	91	93.103	Octodon_degus
ENSSDUG00000008924	thoc3	100	99.379	ENSONIG00000004291	thoc3	100	99.379	Oreochromis_niloticus
ENSSDUG00000008924	thoc3	99	93.125	ENSOCUG00000016387	THOC3	91	93.125	Oryctolagus_cuniculus
ENSSDUG00000008924	thoc3	100	98.447	ENSORLG00000030384	thoc3	92	98.447	Oryzias_latipes
ENSSDUG00000008924	thoc3	100	98.447	ENSORLG00020016372	thoc3	100	98.447	Oryzias_latipes_hni
ENSSDUG00000008924	thoc3	100	98.447	ENSORLG00015000336	thoc3	100	98.447	Oryzias_latipes_hsok
ENSSDUG00000008924	thoc3	100	98.758	ENSOMEG00000021977	thoc3	100	98.758	Oryzias_melastigma
ENSSDUG00000008924	thoc3	99	92.812	ENSOGAG00000003503	THOC3	91	92.812	Otolemur_garnettii
ENSSDUG00000008924	thoc3	99	89.688	ENSOARG00000016600	THOC3	91	89.688	Ovis_aries
ENSSDUG00000008924	thoc3	99	92.812	ENSPPAG00000006020	THOC3	91	92.812	Pan_paniscus
ENSSDUG00000008924	thoc3	99	92.812	ENSPPRG00000020316	THOC3	91	92.812	Panthera_pardus
ENSSDUG00000008924	thoc3	81	95.802	ENSPTIG00000011325	THOC3	75	95.802	Panthera_tigris_altaica
ENSSDUG00000008924	thoc3	99	92.812	ENSPTRG00000017594	THOC3	91	92.812	Pan_troglodytes
ENSSDUG00000008924	thoc3	99	92.812	ENSPANG00000012114	THOC3	91	92.812	Papio_anubis
ENSSDUG00000008924	thoc3	100	96.584	ENSPKIG00000000208	thoc3	100	96.584	Paramormyrops_kingsleyae
ENSSDUG00000008924	thoc3	100	93.789	ENSPMGG00000017949	thoc3	100	93.789	Periophthalmus_magnuspinnatus
ENSSDUG00000008924	thoc3	99	93.125	ENSPEMG00000003118	Thoc3	91	93.125	Peromyscus_maniculatus_bairdii
ENSSDUG00000008924	thoc3	98	86.709	ENSPMAG00000007069	thoc3	98	86.709	Petromyzon_marinus
ENSSDUG00000008924	thoc3	100	97.516	ENSPFOG00000007685	thoc3	92	97.516	Poecilia_formosa
ENSSDUG00000008924	thoc3	100	97.516	ENSPLAG00000003581	thoc3	98	97.516	Poecilia_latipinna
ENSSDUG00000008924	thoc3	100	97.516	ENSPMEG00000005565	thoc3	98	97.516	Poecilia_mexicana
ENSSDUG00000008924	thoc3	100	97.516	ENSPREG00000014916	thoc3	92	97.516	Poecilia_reticulata
ENSSDUG00000008924	thoc3	99	92.812	ENSPPYG00000016066	THOC3	91	92.812	Pongo_abelii
ENSSDUG00000008924	thoc3	99	92.812	ENSPCOG00000023245	THOC3	91	92.812	Propithecus_coquereli
ENSSDUG00000008924	thoc3	99	92.500	ENSPVAG00000012450	THOC3	91	92.500	Pteropus_vampyrus
ENSSDUG00000008924	thoc3	100	98.758	ENSPNYG00000016612	thoc3	100	98.758	Pundamilia_nyererei
ENSSDUG00000008924	thoc3	100	95.342	ENSPNAG00000005252	thoc3	100	95.342	Pygocentrus_nattereri
ENSSDUG00000008924	thoc3	99	93.125	ENSRNOG00000000104	Thoc3	91	93.125	Rattus_norvegicus
ENSSDUG00000008924	thoc3	99	92.812	ENSRBIG00000039571	THOC3	91	92.812	Rhinopithecus_bieti
ENSSDUG00000008924	thoc3	99	92.812	ENSRROG00000031032	THOC3	91	92.812	Rhinopithecus_roxellana
ENSSDUG00000008924	thoc3	99	92.812	ENSSBOG00000022663	THOC3	91	92.812	Saimiri_boliviensis_boliviensis
ENSSDUG00000008924	thoc3	99	72.956	ENSSHAG00000013075	-	91	72.956	Sarcophilus_harrisii
ENSSDUG00000008924	thoc3	98	93.312	ENSSHAG00000010757	THOC3	88	93.312	Sarcophilus_harrisii
ENSSDUG00000008924	thoc3	100	96.894	ENSSFOG00015001867	thoc3	93	96.894	Scleropages_formosus
ENSSDUG00000008924	thoc3	100	98.447	ENSSMAG00000006786	thoc3	100	98.447	Scophthalmus_maximus
ENSSDUG00000008924	thoc3	100	100.000	ENSSLDG00000019128	thoc3	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000008924	thoc3	99	93.769	ENSSPUG00000006652	THOC3	99	93.769	Sphenodon_punctatus
ENSSDUG00000008924	thoc3	100	99.689	ENSSPAG00000014229	thoc3	100	99.689	Stegastes_partitus
ENSSDUG00000008924	thoc3	99	92.812	ENSSSCG00000014061	THOC3	91	92.812	Sus_scrofa
ENSSDUG00000008924	thoc3	97	92.332	ENSTGUG00000000557	THOC3	99	92.332	Taeniopygia_guttata
ENSSDUG00000008924	thoc3	98	97.143	ENSTRUG00000002925	thoc3	91	97.143	Takifugu_rubripes
ENSSDUG00000008924	thoc3	100	96.273	ENSTNIG00000012958	thoc3	100	96.273	Tetraodon_nigroviridis
ENSSDUG00000008924	thoc3	81	95.802	ENSTTRG00000014865	THOC3	100	95.802	Tursiops_truncatus
ENSSDUG00000008924	thoc3	99	92.812	ENSUAMG00000010691	THOC3	91	92.812	Ursus_americanus
ENSSDUG00000008924	thoc3	99	92.812	ENSUMAG00000024511	THOC3	93	92.812	Ursus_maritimus
ENSSDUG00000008924	thoc3	99	87.888	ENSXETG00000022316	thoc3	99	87.888	Xenopus_tropicalis
ENSSDUG00000008924	thoc3	100	97.516	ENSXCOG00000001378	thoc3	100	97.516	Xiphophorus_couchianus
ENSSDUG00000008924	thoc3	100	97.516	ENSXMAG00000003232	thoc3	98	97.516	Xiphophorus_maculatus