EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000009161 (Gene tree)
Gene ID: -
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5206 bases
Position: chrBDQW01000230.1:2958377-2963582
Accession: 111229310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000012593	MMR_HSR1	PF01926.23	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000012816	SRL (1 of many)-201	1347	XM_022755592	ENSSDUP00000012593	448 (aa)	XP_022611313	-

Gene Model

Click here to download ENSSDUG00000009161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000009161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000009161	SRL	87	31.899	ENSSDUG00000000141	ehd2b	69	31.899
ENSSDUG00000009161	SRL	90	30.348	ENSSDUG00000010947	ehd4	70	30.348
ENSSDUG00000009161	SRL	56	35.317	ENSSDUG00000020042	-	52	33.681
ENSSDUG00000009161	SRL	85	31.579	ENSSDUG00000010820	ehd3	70	31.328
ENSSDUG00000009161	SRL	99	77.333	ENSSDUG00000010808	srl	98	77.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000009161	SRL	98	74.833	ENSG00000185739	SRL	99	74.600	Homo_sapiens
ENSSDUG00000009161	SRL	99	77.333	ENSAPOG00000018093	srl	99	77.232	Acanthochromis_polyacanthus
ENSSDUG00000009161	SRL	99	89.509	ENSAPOG00000012432	SRL	99	89.509	Acanthochromis_polyacanthus
ENSSDUG00000009161	SRL	98	74.388	ENSAMEG00000010862	SRL	50	74.388	Ailuropoda_melanoleuca
ENSSDUG00000009161	SRL	99	77.333	ENSACIG00000015799	srl	98	77.333	Amphilophus_citrinellus
ENSSDUG00000009161	SRL	99	86.830	ENSACIG00000015419	SRL	99	86.830	Amphilophus_citrinellus
ENSSDUG00000009161	SRL	97	77.098	ENSAOCG00000007574	srl	100	77.098	Amphiprion_ocellaris
ENSSDUG00000009161	SRL	99	88.596	ENSAOCG00000017049	SRL	98	88.596	Amphiprion_ocellaris
ENSSDUG00000009161	SRL	99	77.111	ENSAPEG00000006911	srl	94	77.111	Amphiprion_percula
ENSSDUG00000009161	SRL	99	85.459	ENSAPEG00000006533	SRL	98	86.130	Amphiprion_percula
ENSSDUG00000009161	SRL	99	77.111	ENSATEG00000024315	srl	94	77.111	Anabas_testudineus
ENSSDUG00000009161	SRL	99	86.752	ENSATEG00000009643	SRL	53	86.752	Anabas_testudineus
ENSSDUG00000009161	SRL	98	73.913	ENSACAG00000016380	SRL	83	73.913	Anolis_carolinensis
ENSSDUG00000009161	SRL	98	83.550	ENSACLG00000024674	SRL	57	83.550	Astatotilapia_calliptera
ENSSDUG00000009161	SRL	99	77.556	ENSACLG00000027685	srl	97	77.556	Astatotilapia_calliptera
ENSSDUG00000009161	SRL	94	80.806	ENSAMXG00000038693	SRL	100	76.957	Astyanax_mexicanus
ENSSDUG00000009161	SRL	98	78.174	ENSAMXG00000018789	srl	87	78.174	Astyanax_mexicanus
ENSSDUG00000009161	SRL	98	74.107	ENSBTAG00000001078	SRL	56	74.107	Bos_taurus
ENSSDUG00000009161	SRL	98	75.056	ENSCJAG00000019750	SRL	93	75.056	Callithrix_jacchus
ENSSDUG00000009161	SRL	98	74.388	ENSCAFG00000019233	SRL	82	74.388	Canis_familiaris
ENSSDUG00000009161	SRL	98	74.554	ENSCAFG00020025024	SRL	54	74.554	Canis_lupus_dingo
ENSSDUG00000009161	SRL	98	74.107	ENSCHIG00000017927	SRL	55	74.107	Capra_hircus
ENSSDUG00000009161	SRL	98	75.278	ENSTSYG00000007919	SRL	99	75.286	Carlito_syrichta
ENSSDUG00000009161	SRL	98	74.610	ENSCPOG00000012643	SRL	94	74.610	Cavia_porcellus
ENSSDUG00000009161	SRL	98	70.824	ENSCCAG00000032646	SRL	100	75.907	Cebus_capucinus
ENSSDUG00000009161	SRL	98	75.000	ENSCATG00000032227	-	93	74.833	Cercocebus_atys
ENSSDUG00000009161	SRL	98	74.833	ENSCLAG00000016242	SRL	94	74.833	Chinchilla_lanigera
ENSSDUG00000009161	SRL	86	77.296	ENSCHOG00000001618	SRL	52	77.296	Choloepus_hoffmanni
ENSSDUG00000009161	SRL	98	76.709	ENSCPBG00000026371	SRL	93	73.203	Chrysemys_picta_bellii
ENSSDUG00000009161	SRL	95	55.035	ENSCING00000005231	-	94	55.035	Ciona_intestinalis
ENSSDUG00000009161	SRL	98	74.833	ENSCANG00000035872	SRL	99	74.600	Colobus_angolensis_palliatus
ENSSDUG00000009161	SRL	98	75.000	ENSCGRG00001016630	Srl	94	74.833	Cricetulus_griseus_chok1gshd
ENSSDUG00000009161	SRL	98	75.000	ENSCGRG00000005458	Srl	94	74.833	Cricetulus_griseus_crigri
ENSSDUG00000009161	SRL	100	85.996	ENSCSEG00000011866	SRL	90	85.996	Cynoglossus_semilaevis
ENSSDUG00000009161	SRL	100	76.096	ENSCSEG00000016151	srl	96	76.096	Cynoglossus_semilaevis
ENSSDUG00000009161	SRL	99	84.086	ENSCVAG00000022465	SRL	61	84.086	Cyprinodon_variegatus
ENSSDUG00000009161	SRL	99	78.000	ENSCVAG00000003513	srl	96	78.000	Cyprinodon_variegatus
ENSSDUG00000009161	SRL	84	80.051	ENSDARG00000112959	CABZ01072309.1	100	80.051	Danio_rerio
ENSSDUG00000009161	SRL	99	78.000	ENSDARG00000104587	srl	94	78.000	Danio_rerio
ENSSDUG00000009161	SRL	98	74.777	ENSDNOG00000011643	SRL	53	74.777	Dasypus_novemcinctus
ENSSDUG00000009161	SRL	98	74.833	ENSDORG00000014807	Srl	94	74.833	Dipodomys_ordii
ENSSDUG00000009161	SRL	82	61.202	ENSEBUG00000015937	srl	91	61.202	Eptatretus_burgeri
ENSSDUG00000009161	SRL	98	74.777	ENSEASG00005000942	SRL	53	74.777	Equus_asinus_asinus
ENSSDUG00000009161	SRL	98	74.777	ENSECAG00000024219	SRL	93	74.777	Equus_caballus
ENSSDUG00000009161	SRL	99	74.573	ENSELUG00000015616	srl	95	74.573	Esox_lucius
ENSSDUG00000009161	SRL	98	74.554	ENSFCAG00000022075	SRL	93	74.388	Felis_catus
ENSSDUG00000009161	SRL	99	73.626	ENSFALG00000004328	SRL	64	73.626	Ficedula_albicollis
ENSSDUG00000009161	SRL	98	75.056	ENSFDAG00000006199	SRL	94	75.056	Fukomys_damarensis
ENSSDUG00000009161	SRL	99	77.556	ENSFHEG00000011239	srl	96	77.556	Fundulus_heteroclitus
ENSSDUG00000009161	SRL	99	84.667	ENSFHEG00000011854	SRL	99	85.333	Fundulus_heteroclitus
ENSSDUG00000009161	SRL	98	76.304	ENSGMOG00000014954	srl	99	76.304	Gadus_morhua
ENSSDUG00000009161	SRL	99	74.066	ENSGALG00000038884	SRL	95	74.066	Gallus_gallus
ENSSDUG00000009161	SRL	100	88.222	ENSGAFG00000016984	SRL	100	88.222	Gambusia_affinis
ENSSDUG00000009161	SRL	98	78.396	ENSGAFG00000000010	srl	96	78.396	Gambusia_affinis
ENSSDUG00000009161	SRL	98	75.271	ENSGACG00000011332	srl	99	75.271	Gasterosteus_aculeatus
ENSSDUG00000009161	SRL	98	75.000	ENSGGOG00000011312	-	93	74.833	Gorilla_gorilla
ENSSDUG00000009161	SRL	98	83.983	ENSHBUG00000015710	SRL	57	83.983	Haplochromis_burtoni
ENSSDUG00000009161	SRL	99	77.556	ENSHBUG00000007581	srl	97	77.556	Haplochromis_burtoni
ENSSDUG00000009161	SRL	98	75.278	ENSHGLG00000015271	SRL	94	75.278	Heterocephalus_glaber_female
ENSSDUG00000009161	SRL	98	75.278	ENSHGLG00100019378	SRL	94	75.278	Heterocephalus_glaber_male
ENSSDUG00000009161	SRL	99	83.585	ENSHCOG00000001012	SRL	50	83.585	Hippocampus_comes
ENSSDUG00000009161	SRL	99	76.889	ENSHCOG00000008687	srl	98	76.889	Hippocampus_comes
ENSSDUG00000009161	SRL	99	76.889	ENSIPUG00000012513	srl	95	76.889	Ictalurus_punctatus
ENSSDUG00000009161	SRL	98	69.677	ENSIPUG00000011609	SRL	100	69.677	Ictalurus_punctatus
ENSSDUG00000009161	SRL	98	75.000	ENSSTOG00000021151	-	94	74.779	Ictidomys_tridecemlineatus
ENSSDUG00000009161	SRL	98	74.833	ENSJJAG00000016400	Srl	94	74.833	Jaculus_jaculus
ENSSDUG00000009161	SRL	98	88.662	ENSKMAG00000019537	SRL	100	88.662	Kryptolebias_marmoratus
ENSSDUG00000009161	SRL	96	78.802	ENSKMAG00000014115	srl	93	78.271	Kryptolebias_marmoratus
ENSSDUG00000009161	SRL	99	77.042	ENSLBEG00000026643	srl	95	77.042	Labrus_bergylta
ENSSDUG00000009161	SRL	99	87.473	ENSLBEG00000013811	SRL	97	87.473	Labrus_bergylta
ENSSDUG00000009161	SRL	99	74.501	ENSLACG00000002825	SRL	98	74.501	Latimeria_chalumnae
ENSSDUG00000009161	SRL	99	77.384	ENSLOCG00000002644	srl	95	77.384	Lepisosteus_oculatus
ENSSDUG00000009161	SRL	98	74.554	ENSLAFG00000006329	SRL	50	74.554	Loxodonta_africana
ENSSDUG00000009161	SRL	96	74.600	ENSMFAG00000037383	SRL	99	74.600	Macaca_fascicularis
ENSSDUG00000009161	SRL	98	75.000	ENSMNEG00000019236	-	93	74.833	Macaca_nemestrina
ENSSDUG00000009161	SRL	98	68.820	ENSMLEG00000032156	SRL	93	68.820	Mandrillus_leucophaeus
ENSSDUG00000009161	SRL	99	77.111	ENSMAMG00000023322	srl	94	77.111	Mastacembelus_armatus
ENSSDUG00000009161	SRL	99	86.538	ENSMAMG00000013756	SRL	54	86.538	Mastacembelus_armatus
ENSSDUG00000009161	SRL	99	77.556	ENSMZEG00005004548	srl	97	77.556	Maylandia_zebra
ENSSDUG00000009161	SRL	98	83.766	ENSMZEG00005004010	SRL	57	83.766	Maylandia_zebra
ENSSDUG00000009161	SRL	99	73.846	ENSMGAG00000009342	SRL	94	77.368	Meleagris_gallopavo
ENSSDUG00000009161	SRL	99	75.333	ENSMICG00000032307	SRL	94	75.333	Microcebus_murinus
ENSSDUG00000009161	SRL	99	74.336	ENSMOCG00000008208	Srl	94	74.388	Microtus_ochrogaster
ENSSDUG00000009161	SRL	99	77.111	ENSMMOG00000013970	srl	98	77.111	Mola_mola
ENSSDUG00000009161	SRL	99	85.345	ENSMMOG00000021572	SRL	100	85.345	Mola_mola
ENSSDUG00000009161	SRL	98	75.893	ENSMODG00000016380	-	50	75.893	Monodelphis_domestica
ENSSDUG00000009161	SRL	99	76.327	ENSMALG00000005039	srl	98	76.327	Monopterus_albus
ENSSDUG00000009161	SRL	93	88.517	ENSMALG00000000670	SRL	98	88.517	Monopterus_albus
ENSSDUG00000009161	SRL	98	75.223	MGP_CAROLIEiJ_G0020400	Srl	94	75.056	Mus_caroli
ENSSDUG00000009161	SRL	98	75.223	ENSMUSG00000022519	Srl	94	75.056	Mus_musculus
ENSSDUG00000009161	SRL	98	75.223	MGP_SPRETEiJ_G0021294	Srl	94	75.056	Mus_spretus
ENSSDUG00000009161	SRL	98	74.388	ENSMPUG00000015025	SRL	54	74.388	Mustela_putorius_furo
ENSSDUG00000009161	SRL	98	75.223	ENSMLUG00000030733	SRL	55	75.223	Myotis_lucifugus
ENSSDUG00000009161	SRL	98	75.056	ENSNGAG00000019741	Srl	94	75.056	Nannospalax_galili
ENSSDUG00000009161	SRL	98	83.117	ENSNBRG00000002422	SRL	57	83.117	Neolamprologus_brichardi
ENSSDUG00000009161	SRL	99	77.556	ENSNBRG00000023775	srl	94	77.556	Neolamprologus_brichardi
ENSSDUG00000009161	SRL	98	70.156	ENSNLEG00000029051	SRL	93	70.156	Nomascus_leucogenys
ENSSDUG00000009161	SRL	98	69.710	ENSOPRG00000000477	-	52	69.710	Ochotona_princeps
ENSSDUG00000009161	SRL	98	75.501	ENSODEG00000013256	SRL	94	75.501	Octodon_degus
ENSSDUG00000009161	SRL	99	77.333	ENSONIG00000005192	srl	94	77.333	Oreochromis_niloticus
ENSSDUG00000009161	SRL	99	78.000	ENSORLG00000008291	srl	92	78.894	Oryzias_latipes
ENSSDUG00000009161	SRL	99	86.667	ENSORLG00000015064	SRL	98	86.667	Oryzias_latipes
ENSSDUG00000009161	SRL	99	86.889	ENSORLG00020018173	SRL	98	86.889	Oryzias_latipes_hni
ENSSDUG00000009161	SRL	99	77.778	ENSORLG00020019784	srl	80	79.040	Oryzias_latipes_hni
ENSSDUG00000009161	SRL	99	87.111	ENSORLG00015019063	SRL	98	87.111	Oryzias_latipes_hsok
ENSSDUG00000009161	SRL	99	77.556	ENSORLG00015009342	srl	91	77.556	Oryzias_latipes_hsok
ENSSDUG00000009161	SRL	99	78.222	ENSOMEG00000010006	srl	98	77.827	Oryzias_melastigma
ENSSDUG00000009161	SRL	99	83.974	ENSOMEG00000005682	SRL	53	83.974	Oryzias_melastigma
ENSSDUG00000009161	SRL	99	74.222	ENSOGAG00000029266	SRL	54	74.222	Otolemur_garnettii
ENSSDUG00000009161	SRL	98	74.107	ENSOARG00000003074	SRL	55	74.107	Ovis_aries
ENSSDUG00000009161	SRL	98	75.000	ENSPPAG00000024919	-	99	74.600	Pan_paniscus
ENSSDUG00000009161	SRL	98	74.388	ENSPPRG00000010274	SRL	99	74.371	Panthera_pardus
ENSSDUG00000009161	SRL	98	74.388	ENSPTIG00000015162	SRL	99	74.371	Panthera_tigris_altaica
ENSSDUG00000009161	SRL	98	75.000	ENSPTRG00000007712	SRL	99	74.600	Pan_troglodytes
ENSSDUG00000009161	SRL	98	74.833	ENSPANG00000013804	SRL	95	74.833	Papio_anubis
ENSSDUG00000009161	SRL	99	75.056	ENSPKIG00000024974	SRL	88	75.056	Paramormyrops_kingsleyae
ENSSDUG00000009161	SRL	99	79.778	ENSPKIG00000006405	srl	94	79.778	Paramormyrops_kingsleyae
ENSSDUG00000009161	SRL	99	86.425	ENSPMGG00000023505	-	100	86.425	Periophthalmus_magnuspinnatus
ENSSDUG00000009161	SRL	98	77.728	ENSPMGG00000021081	srl	95	77.728	Periophthalmus_magnuspinnatus
ENSSDUG00000009161	SRL	98	74.610	ENSPEMG00000015842	Srl	94	74.610	Peromyscus_maniculatus_bairdii
ENSSDUG00000009161	SRL	93	62.358	ENSPMAG00000004786	srl	99	62.358	Petromyzon_marinus
ENSSDUG00000009161	SRL	99	74.945	ENSPCIG00000012128	SRL	98	74.945	Phascolarctos_cinereus
ENSSDUG00000009161	SRL	99	76.190	ENSPFOG00000011408	srl	94	76.190	Poecilia_formosa
ENSSDUG00000009161	SRL	100	86.313	ENSPLAG00000002932	SRL	100	86.313	Poecilia_latipinna
ENSSDUG00000009161	SRL	99	78.000	ENSPLAG00000008017	srl	96	78.000	Poecilia_latipinna
ENSSDUG00000009161	SRL	99	78.000	ENSPMEG00000006745	srl	96	78.000	Poecilia_mexicana
ENSSDUG00000009161	SRL	100	83.795	ENSPMEG00000005890	SRL	60	83.795	Poecilia_mexicana
ENSSDUG00000009161	SRL	100	86.755	ENSPREG00000000315	SRL	100	86.755	Poecilia_reticulata
ENSSDUG00000009161	SRL	99	77.778	ENSPREG00000007751	srl	98	77.778	Poecilia_reticulata
ENSSDUG00000009161	SRL	96	74.142	ENSPPYG00000007053	SRL	100	74.142	Pongo_abelii
ENSSDUG00000009161	SRL	98	75.223	ENSPCAG00000003378	-	50	75.223	Procavia_capensis
ENSSDUG00000009161	SRL	99	74.889	ENSPCOG00000023135	SRL	99	75.057	Propithecus_coquereli
ENSSDUG00000009161	SRL	98	75.056	ENSPVAG00000006586	SRL	54	75.056	Pteropus_vampyrus
ENSSDUG00000009161	SRL	98	83.766	ENSPNYG00000003423	SRL	57	83.766	Pundamilia_nyererei
ENSSDUG00000009161	SRL	99	77.556	ENSPNYG00000001200	srl	97	77.556	Pundamilia_nyererei
ENSSDUG00000009161	SRL	99	79.691	ENSPNAG00000007361	-	92	79.691	Pygocentrus_nattereri
ENSSDUG00000009161	SRL	99	77.333	ENSPNAG00000023106	srl	94	77.333	Pygocentrus_nattereri
ENSSDUG00000009161	SRL	98	75.223	ENSSBOG00000029273	SRL	93	75.056	Saimiri_boliviensis_boliviensis
ENSSDUG00000009161	SRL	99	78.000	ENSSFOG00015009773	srl	95	78.000	Scleropages_formosus
ENSSDUG00000009161	SRL	99	77.556	ENSSMAG00000016274	srl	97	77.556	Scophthalmus_maximus
ENSSDUG00000009161	SRL	100	87.021	ENSSMAG00000002232	SRL	51	87.021	Scophthalmus_maximus
ENSSDUG00000009161	SRL	99	93.305	ENSSLDG00000014601	SRL	100	93.305	Seriola_lalandi_dorsalis
ENSSDUG00000009161	SRL	99	77.333	ENSSLDG00000022024	srl	96	77.333	Seriola_lalandi_dorsalis
ENSSDUG00000009161	SRL	98	74.330	ENSSPUG00000016859	SRL	97	74.330	Sphenodon_punctatus
ENSSDUG00000009161	SRL	99	76.889	ENSSPAG00000019105	srl	94	76.889	Stegastes_partitus
ENSSDUG00000009161	SRL	99	89.509	ENSSPAG00000014254	SRL	99	89.509	Stegastes_partitus
ENSSDUG00000009161	SRL	98	75.000	ENSSSCG00000007949	SRL	98	75.000	Sus_scrofa
ENSSDUG00000009161	SRL	82	78.320	ENSTGUG00000016121	-	100	78.320	Taeniopygia_guttata
ENSSDUG00000009161	SRL	99	73.846	ENSTGUG00000003951	-	98	73.846	Taeniopygia_guttata
ENSSDUG00000009161	SRL	98	77.283	ENSTRUG00000006005	srl	94	77.283	Takifugu_rubripes
ENSSDUG00000009161	SRL	93	86.223	ENSTRUG00000013310	SRL	55	86.223	Takifugu_rubripes
ENSSDUG00000009161	SRL	98	77.060	ENSTNIG00000009739	srl	94	77.060	Tetraodon_nigroviridis
ENSSDUG00000009161	SRL	98	74.388	ENSUAMG00000005701	SRL	55	74.554	Ursus_americanus
ENSSDUG00000009161	SRL	98	74.388	ENSUMAG00000002574	SRL	54	74.554	Ursus_maritimus
ENSSDUG00000009161	SRL	98	76.392	ENSXETG00000017313	srl	98	76.392	Xenopus_tropicalis
ENSSDUG00000009161	SRL	100	87.556	ENSXCOG00000014584	SRL	99	87.556	Xiphophorus_couchianus
ENSSDUG00000009161	SRL	94	78.140	ENSXCOG00000010424	srl	97	78.140	Xiphophorus_couchianus
ENSSDUG00000009161	SRL	99	77.556	ENSXMAG00000004625	srl	90	77.556	Xiphophorus_maculatus
ENSSDUG00000009161	SRL	100	84.435	ENSXMAG00000027598	SRL	63	84.435	Xiphophorus_maculatus