EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000009314 (Gene tree)
Gene ID: 111239013
Gene Symbol: -
Alias: -
Full Name: RE1-silencing transcription factor-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3451 bases
Position: chrBDQW01001821.1:858487-861937
Accession: 111239013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000012790	zf-C2H2	PF00096.26	3.1e-16	1	3
ENSSDUP00000012790	zf-C2H2	PF00096.26	3.1e-16	2	3
ENSSDUP00000012790	zf-C2H2	PF00096.26	3.1e-16	3	3
ENSSDUP00000012790	zf-met	PF12874.7	9.2e-09	1	3
ENSSDUP00000012790	zf-met	PF12874.7	9.2e-09	2	3
ENSSDUP00000012790	zf-met	PF12874.7	9.2e-09	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000013022	-	2329	XM_022768778	ENSSDUP00000012790	691 (aa)	XP_022624499	UPI000BBEEA6B

Gene Model

Click here to download ENSSDUG00000009314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000009314's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000009314	-	100	72.370	ENSSDUG00000009322	-	99	72.791
ENSSDUG00000009314	-	50	40.217	ENSSDUG00000011170	znf236	51	40.217
ENSSDUG00000009314	-	100	58.592	ENSSDUG00000009330	-	100	58.650
ENSSDUG00000009314	-	54	36.190	ENSSDUG00000001918	znf366	68	36.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000009314	-	100	52.564	ENSAOCG00000011236	-	100	52.063	Amphiprion_ocellaris
ENSSDUG00000009314	-	100	55.222	ENSAOCG00000011223	-	99	54.663	Amphiprion_ocellaris
ENSSDUG00000009314	-	100	55.365	ENSAPEG00000007889	-	95	69.697	Amphiprion_percula
ENSSDUG00000009314	-	100	52.354	ENSAPEG00000007910	-	100	51.709	Amphiprion_percula
ENSSDUG00000009314	-	100	68.163	ENSATEG00000011955	-	100	68.258	Anabas_testudineus
ENSSDUG00000009314	-	99	44.163	ENSCVAG00000009534	-	76	43.812	Cyprinodon_variegatus
ENSSDUG00000009314	-	54	53.281	ENSKMAG00000011202	-	77	52.231	Kryptolebias_marmoratus
ENSSDUG00000009314	-	91	51.302	ENSKMAG00000011226	-	98	50.923	Kryptolebias_marmoratus
ENSSDUG00000009314	-	94	50.812	ENSKMAG00000011235	-	97	49.633	Kryptolebias_marmoratus
ENSSDUG00000009314	-	100	66.620	ENSMALG00000017354	-	100	66.900	Monopterus_albus
ENSSDUG00000009314	-	65	66.316	ENSPMEG00000021927	-	97	66.316	Poecilia_mexicana
ENSSDUG00000009314	-	100	98.553	ENSSLDG00000012635	-	100	98.553	Seriola_lalandi_dorsalis
ENSSDUG00000009314	-	51	53.429	ENSSPAG00000009405	-	88	53.582	Stegastes_partitus