EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000009322 (Gene tree)
Gene ID: 111239014
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 13-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3919 bases
Position: chrBDQW01001821.1:863724-867642
Accession: 111239014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000012809	zf-C2H2	PF00096.26	3.2e-19	1	3
ENSSDUP00000012809	zf-C2H2	PF00096.26	3.2e-19	2	3
ENSSDUP00000012809	zf-C2H2	PF00096.26	3.2e-19	3	3
ENSSDUP00000012809	zf-met	PF12874.7	1.8e-09	1	3
ENSSDUP00000012809	zf-met	PF12874.7	1.8e-09	2	3
ENSSDUP00000012809	zf-met	PF12874.7	1.8e-09	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000013041	-	2805	XM_022768779	ENSSDUP00000012809	691 (aa)	XP_022624500	UPI000BBF061E

Gene Model

Click here to download ENSSDUG00000009322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000009322's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000009322	-	99	72.791	ENSSDUG00000009314	-	100	72.370
ENSSDUG00000009322	-	99	58.056	ENSSDUG00000009330	-	100	57.836

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000009322	-	99	51.257	ENSAOCG00000011236	-	100	51.117	Amphiprion_ocellaris
ENSSDUG00000009322	-	100	55.602	ENSAOCG00000011223	-	100	55.664	Amphiprion_ocellaris
ENSSDUG00000009322	-	99	51.397	ENSAPEG00000007910	-	100	51.120	Amphiprion_percula
ENSSDUG00000009322	-	100	55.742	ENSAPEG00000007889	-	95	67.879	Amphiprion_percula
ENSSDUG00000009322	-	97	60.895	ENSATEG00000011955	-	100	61.017	Anabas_testudineus
ENSSDUG00000009322	-	99	45.391	ENSCVAG00000009534	-	76	46.045	Cyprinodon_variegatus
ENSSDUG00000009322	-	94	50.597	ENSKMAG00000011235	-	92	51.318	Kryptolebias_marmoratus
ENSSDUG00000009322	-	51	55.923	ENSKMAG00000011202	-	60	60.959	Kryptolebias_marmoratus
ENSSDUG00000009322	-	93	48.193	ENSKMAG00000011226	-	97	47.678	Kryptolebias_marmoratus
ENSSDUG00000009322	-	99	59.972	ENSMALG00000017354	-	100	60.139	Monopterus_albus
ENSSDUG00000009322	-	67	58.333	ENSPMEG00000021927	-	99	57.258	Poecilia_mexicana
ENSSDUG00000009322	-	100	86.801	ENSSLDG00000012635	-	100	86.801	Seriola_lalandi_dorsalis