EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000009424 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2574 bases
Position: chrBDQW01000089.1:453141-455714
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000012957	RRM_1	PF00076.22	8e-31	1	2
ENSSDUP00000012957	RRM_1	PF00076.22	8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000013193	-	2574	-	ENSSDUP00000012957	857 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000009424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000009424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000009424	-	100	64.645	ENSSDUG00000008769	rbm15	100	65.675

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000009424	-	100	57.279	ENSG00000162775	RBM15	98	58.521	Homo_sapiens
ENSSDUG00000009424	-	100	65.561	ENSAPOG00000018748	rbm15	100	66.476	Acanthochromis_polyacanthus
ENSSDUG00000009424	-	96	83.313	ENSAPOG00000017590	-	100	84.160	Acanthochromis_polyacanthus
ENSSDUG00000009424	-	99	57.128	ENSAMEG00000011540	RBM15	95	58.476	Ailuropoda_melanoleuca
ENSSDUG00000009424	-	100	64.586	ENSACIG00000004343	rbm15	100	65.376	Amphilophus_citrinellus
ENSSDUG00000009424	-	100	80.233	ENSACIG00000019811	-	100	80.698	Amphilophus_citrinellus
ENSSDUG00000009424	-	100	84.750	ENSAOCG00000021969	-	100	85.332	Amphiprion_ocellaris
ENSSDUG00000009424	-	100	65.332	ENSAOCG00000016849	rbm15	100	66.247	Amphiprion_ocellaris
ENSSDUG00000009424	-	100	65.446	ENSAPEG00000020077	rbm15	100	66.362	Amphiprion_percula
ENSSDUG00000009424	-	99	84.947	ENSAPEG00000015151	-	98	85.531	Amphiprion_percula
ENSSDUG00000009424	-	100	85.995	ENSATEG00000005926	-	100	86.574	Anabas_testudineus
ENSSDUG00000009424	-	100	64.726	ENSATEG00000019337	rbm15	100	65.753	Anabas_testudineus
ENSSDUG00000009424	-	99	56.869	ENSANAG00000020673	RBM15	94	58.047	Aotus_nancymaae
ENSSDUG00000009424	-	100	64.773	ENSACLG00000001673	rbm15	100	65.336	Astatotilapia_calliptera
ENSSDUG00000009424	-	99	79.813	ENSACLG00000022961	-	97	79.697	Astatotilapia_calliptera
ENSSDUG00000009424	-	100	66.065	ENSAMXG00000026103	rbm15	100	68.290	Astyanax_mexicanus
ENSSDUG00000009424	-	99	57.447	ENSBTAG00000012555	RBM15	95	58.521	Bos_taurus
ENSSDUG00000009424	-	99	57.082	ENSCJAG00000003411	RBM15	94	58.369	Callithrix_jacchus
ENSSDUG00000009424	-	99	57.929	ENSCAFG00000019789	RBM15	94	58.798	Canis_familiaris
ENSSDUG00000009424	-	99	57.866	ENSCAFG00020009671	RBM15	94	58.798	Canis_lupus_dingo
ENSSDUG00000009424	-	99	57.234	ENSCHIG00000026774	RBM15	95	58.521	Capra_hircus
ENSSDUG00000009424	-	99	57.021	ENSTSYG00000000106	RBM15	94	58.647	Carlito_syrichta
ENSSDUG00000009424	-	71	60.829	ENSCAPG00000013057	RBM15	98	59.970	Cavia_aperea
ENSSDUG00000009424	-	99	56.702	ENSCPOG00000007520	RBM15	95	58.369	Cavia_porcellus
ENSSDUG00000009424	-	99	56.976	ENSCCAG00000036780	RBM15	94	58.155	Cebus_capucinus
ENSSDUG00000009424	-	99	56.976	ENSCATG00000015743	RBM15	94	58.110	Cercocebus_atys
ENSSDUG00000009424	-	99	56.930	ENSCLAG00000008406	RBM15	95	58.539	Chinchilla_lanigera
ENSSDUG00000009424	-	99	56.976	ENSCSAG00000001563	RBM15	93	58.110	Chlorocebus_sabaeus
ENSSDUG00000009424	-	86	57.434	ENSCPBG00000001662	RBM15	100	56.269	Chrysemys_picta_bellii
ENSSDUG00000009424	-	99	56.869	ENSCANG00000038717	RBM15	93	58.002	Colobus_angolensis_palliatus
ENSSDUG00000009424	-	99	56.564	ENSCGRG00001001004	Rbm15	95	58.065	Cricetulus_griseus_chok1gshd
ENSSDUG00000009424	-	99	56.564	ENSCGRG00000010592	Rbm15	95	58.065	Cricetulus_griseus_crigri
ENSSDUG00000009424	-	100	73.883	ENSCSEG00000002314	-	100	72.967	Cynoglossus_semilaevis
ENSSDUG00000009424	-	100	65.332	ENSCSEG00000004062	rbm15	100	65.904	Cynoglossus_semilaevis
ENSSDUG00000009424	-	100	64.409	ENSCVAG00000013185	rbm15	100	65.098	Cyprinodon_variegatus
ENSSDUG00000009424	-	100	73.162	ENSCVAG00000004005	-	100	72.695	Cyprinodon_variegatus
ENSSDUG00000009424	-	100	66.934	ENSDARG00000073847	rbm15	100	67.735	Danio_rerio
ENSSDUG00000009424	-	69	57.337	ENSDNOG00000032007	RBM15	90	59.542	Dasypus_novemcinctus
ENSSDUG00000009424	-	86	61.893	ENSDORG00000005669	Rbm15	100	58.503	Dipodomys_ordii
ENSSDUG00000009424	-	99	57.021	ENSEASG00005005359	RBM15	95	58.521	Equus_asinus_asinus
ENSSDUG00000009424	-	99	57.021	ENSECAG00000023660	RBM15	95	58.521	Equus_caballus
ENSSDUG00000009424	-	100	70.800	ENSELUG00000014614	RBM15	100	71.263	Esox_lucius
ENSSDUG00000009424	-	99	62.822	ENSELUG00000016087	rbm15	97	64.581	Esox_lucius
ENSSDUG00000009424	-	99	56.915	ENSFCAG00000028208	RBM15	94	58.155	Felis_catus
ENSSDUG00000009424	-	66	60.826	ENSFALG00000003062	RBM15	99	68.060	Ficedula_albicollis
ENSSDUG00000009424	-	99	56.809	ENSFDAG00000020743	RBM15	95	58.369	Fukomys_damarensis
ENSSDUG00000009424	-	100	63.931	ENSFHEG00000005024	rbm15	100	64.896	Fundulus_heteroclitus
ENSSDUG00000009424	-	100	72.074	ENSFHEG00000005559	-	100	71.958	Fundulus_heteroclitus
ENSSDUG00000009424	-	61	72.491	ENSGMOG00000019941	rbm15	100	73.606	Gadus_morhua
ENSSDUG00000009424	-	86	57.160	ENSGALG00000000401	RBM15	100	54.462	Gallus_gallus
ENSSDUG00000009424	-	100	74.009	ENSGAFG00000021611	-	96	73.893	Gambusia_affinis
ENSSDUG00000009424	-	100	63.847	ENSGAFG00000001534	rbm15	98	63.847	Gambusia_affinis
ENSSDUG00000009424	-	99	81.308	ENSGACG00000001022	-	99	81.308	Gasterosteus_aculeatus
ENSSDUG00000009424	-	100	65.332	ENSGACG00000007932	rbm15	99	66.247	Gasterosteus_aculeatus
ENSSDUG00000009424	-	86	57.503	ENSGAGG00000012252	RBM15	100	56.321	Gopherus_agassizii
ENSSDUG00000009424	-	99	57.188	ENSGGOG00000003655	RBM15	93	58.521	Gorilla_gorilla
ENSSDUG00000009424	-	100	64.480	ENSHBUG00000022227	rbm15	100	65.040	Haplochromis_burtoni
ENSSDUG00000009424	-	100	79.395	ENSHBUG00000003220	-	100	79.278	Haplochromis_burtoni
ENSSDUG00000009424	-	99	57.128	ENSHGLG00000014811	RBM15	95	58.217	Heterocephalus_glaber_female
ENSSDUG00000009424	-	99	57.128	ENSHGLG00100017137	RBM15	95	58.217	Heterocephalus_glaber_male
ENSSDUG00000009424	-	100	63.835	ENSHCOG00000004048	rbm15	100	63.835	Hippocampus_comes
ENSSDUG00000009424	-	100	66.783	ENSHCOG00000005229	RBM15	100	66.667	Hippocampus_comes
ENSSDUG00000009424	-	100	65.870	ENSIPUG00000004415	RBM15	100	66.780	Ictalurus_punctatus
ENSSDUG00000009424	-	99	56.688	ENSSTOG00000026597	RBM15	95	58.047	Ictidomys_tridecemlineatus
ENSSDUG00000009424	-	99	57.113	ENSJJAG00000021795	Rbm15	95	58.761	Jaculus_jaculus
ENSSDUG00000009424	-	100	70.267	ENSKMAG00000021291	-	99	70.732	Kryptolebias_marmoratus
ENSSDUG00000009424	-	100	65.138	ENSKMAG00000017681	rbm15	100	66.055	Kryptolebias_marmoratus
ENSSDUG00000009424	-	100	65.446	ENSLBEG00000008274	rbm15	100	66.133	Labrus_bergylta
ENSSDUG00000009424	-	96	81.862	ENSLBEG00000013105	-	100	81.620	Labrus_bergylta
ENSSDUG00000009424	-	100	62.245	ENSLACG00000018372	RBM15	100	62.656	Latimeria_chalumnae
ENSSDUG00000009424	-	100	68.095	ENSLOCG00000017940	rbm15	100	69.222	Lepisosteus_oculatus
ENSSDUG00000009424	-	99	56.777	ENSLAFG00000012897	RBM15	95	58.235	Loxodonta_africana
ENSSDUG00000009424	-	99	56.869	ENSMFAG00000029929	RBM15	94	58.002	Macaca_fascicularis
ENSSDUG00000009424	-	99	56.869	ENSMMUG00000015020	RBM15	94	58.002	Macaca_mulatta
ENSSDUG00000009424	-	99	56.869	ENSMNEG00000045235	RBM15	94	58.002	Macaca_nemestrina
ENSSDUG00000009424	-	99	56.976	ENSMLEG00000035727	RBM15	93	58.110	Mandrillus_leucophaeus
ENSSDUG00000009424	-	100	65.561	ENSMAMG00000010732	rbm15	100	66.362	Mastacembelus_armatus
ENSSDUG00000009424	-	96	83.313	ENSMAMG00000023921	-	100	83.433	Mastacembelus_armatus
ENSSDUG00000009424	-	100	64.773	ENSMZEG00005006595	rbm15	100	65.336	Maylandia_zebra
ENSSDUG00000009424	-	99	79.813	ENSMZEG00005010876	-	98	79.697	Maylandia_zebra
ENSSDUG00000009424	-	99	56.503	ENSMAUG00000007198	Rbm15	95	58.002	Mesocricetus_auratus
ENSSDUG00000009424	-	99	56.763	ENSMICG00000005255	RBM15	95	58.002	Microcebus_murinus
ENSSDUG00000009424	-	99	56.383	ENSMOCG00000013142	Rbm15	95	57.527	Microtus_ochrogaster
ENSSDUG00000009424	-	100	65.407	ENSMMOG00000002357	rbm15	100	65.446	Mola_mola
ENSSDUG00000009424	-	100	77.030	ENSMMOG00000021778	-	100	77.262	Mola_mola
ENSSDUG00000009424	-	100	78.605	ENSMALG00000017867	-	100	79.186	Monopterus_albus
ENSSDUG00000009424	-	100	64.794	ENSMALG00000019648	rbm15	100	65.596	Monopterus_albus
ENSSDUG00000009424	-	99	56.397	MGP_CAROLIEiJ_G0025501	Rbm15	95	57.511	Mus_caroli
ENSSDUG00000009424	-	99	56.503	ENSMUSG00000048109	Rbm15	95	57.618	Mus_musculus
ENSSDUG00000009424	-	99	56.610	MGP_PahariEiJ_G0026947	Rbm15	95	57.725	Mus_pahari
ENSSDUG00000009424	-	99	56.503	MGP_SPRETEiJ_G0026451	Rbm15	95	57.618	Mus_spretus
ENSSDUG00000009424	-	99	57.067	ENSMPUG00000003822	RBM15	94	58.262	Mustela_putorius_furo
ENSSDUG00000009424	-	99	56.791	ENSMLUG00000007169	RBM15	94	58.710	Myotis_lucifugus
ENSSDUG00000009424	-	99	56.462	ENSNGAG00000011394	Rbm15	95	58.271	Nannospalax_galili
ENSSDUG00000009424	-	100	79.977	ENSNBRG00000005460	-	100	79.860	Neolamprologus_brichardi
ENSSDUG00000009424	-	100	64.480	ENSNBRG00000008870	rbm15	100	65.153	Neolamprologus_brichardi
ENSSDUG00000009424	-	100	64.480	ENSNBRG00000003947	rbm15	100	65.153	Neolamprologus_brichardi
ENSSDUG00000009424	-	99	56.976	ENSNLEG00000003601	RBM15	93	58.155	Nomascus_leucogenys
ENSSDUG00000009424	-	99	57.797	ENSMEUG00000015940	RBM15	93	59.002	Notamacropus_eugenii
ENSSDUG00000009424	-	100	56.051	ENSODEG00000019343	RBM15	100	57.923	Octodon_degus
ENSSDUG00000009424	-	96	80.290	ENSONIG00000018955	-	100	79.927	Oreochromis_niloticus
ENSSDUG00000009424	-	100	65.486	ENSONIG00000002532	rbm15	100	66.170	Oreochromis_niloticus
ENSSDUG00000009424	-	99	56.869	ENSOCUG00000002434	RBM15	94	58.155	Oryctolagus_cuniculus
ENSSDUG00000009424	-	100	74.767	ENSORLG00000000433	-	99	75.029	Oryzias_latipes
ENSSDUG00000009424	-	100	65.247	ENSORLG00000006197	rbm15	100	65.938	Oryzias_latipes
ENSSDUG00000009424	-	100	65.242	ENSORLG00020011223	rbm15	100	65.935	Oryzias_latipes_hni
ENSSDUG00000009424	-	100	73.807	ENSORLG00020008048	-	100	74.070	Oryzias_latipes_hni
ENSSDUG00000009424	-	100	74.276	ENSORLG00015004063	-	100	74.537	Oryzias_latipes_hsok
ENSSDUG00000009424	-	100	65.362	ENSORLG00015003078	rbm15	100	66.053	Oryzias_latipes_hsok
ENSSDUG00000009424	-	100	64.638	ENSOMEG00000020683	rbm15	100	65.521	Oryzias_melastigma
ENSSDUG00000009424	-	100	72.106	ENSOMEG00000014662	-	100	72.801	Oryzias_melastigma
ENSSDUG00000009424	-	100	57.737	ENSOGAG00000009182	RBM15	100	58.058	Otolemur_garnettii
ENSSDUG00000009424	-	99	56.976	ENSOARG00000019430	RBM15	93	58.199	Ovis_aries
ENSSDUG00000009424	-	99	57.188	ENSPPAG00000041967	RBM15	93	58.521	Pan_paniscus
ENSSDUG00000009424	-	99	56.915	ENSPPRG00000013347	RBM15	94	58.155	Panthera_pardus
ENSSDUG00000009424	-	99	58.215	ENSPTIG00000010318	RBM15	94	58.792	Panthera_tigris_altaica
ENSSDUG00000009424	-	99	57.188	ENSPTRG00000001074	RBM15	94	58.476	Pan_troglodytes
ENSSDUG00000009424	-	99	56.976	ENSPANG00000020891	RBM15	94	58.110	Papio_anubis
ENSSDUG00000009424	-	100	67.857	ENSPKIG00000003067	-	100	67.972	Paramormyrops_kingsleyae
ENSSDUG00000009424	-	85	66.935	ENSPKIG00000013584	rbm15	92	65.666	Paramormyrops_kingsleyae
ENSSDUG00000009424	-	59	57.195	ENSPSIG00000001607	RBM15	100	58.470	Pelodiscus_sinensis
ENSSDUG00000009424	-	100	73.776	ENSPMGG00000017642	-	100	75.058	Periophthalmus_magnuspinnatus
ENSSDUG00000009424	-	100	63.563	ENSPMGG00000016039	rbm15	100	63.563	Periophthalmus_magnuspinnatus
ENSSDUG00000009424	-	99	56.517	ENSPEMG00000000014	Rbm15	95	57.696	Peromyscus_maniculatus_bairdii
ENSSDUG00000009424	-	86	63.033	ENSPCIG00000003458	RBM15	94	58.969	Phascolarctos_cinereus
ENSSDUG00000009424	-	99	63.176	ENSPFOG00000012754	rbm15	97	63.636	Poecilia_formosa
ENSSDUG00000009424	-	100	64.106	ENSPLAG00000003560	rbm15	100	65.138	Poecilia_latipinna
ENSSDUG00000009424	-	100	75.496	ENSPLAG00000015343	-	100	75.029	Poecilia_latipinna
ENSSDUG00000009424	-	100	64.106	ENSPMEG00000002049	rbm15	100	64.908	Poecilia_mexicana
ENSSDUG00000009424	-	100	75.496	ENSPMEG00000001923	-	100	75.029	Poecilia_mexicana
ENSSDUG00000009424	-	100	63.825	ENSPREG00000014581	rbm15	100	64.794	Poecilia_reticulata
ENSSDUG00000009424	-	100	75.291	ENSPREG00000004167	-	100	74.942	Poecilia_reticulata
ENSSDUG00000009424	-	99	56.869	ENSPPYG00000001051	RBM15	94	58.110	Pongo_abelii
ENSSDUG00000009424	-	66	46.769	ENSPPYG00000015734	-	99	45.258	Pongo_abelii
ENSSDUG00000009424	-	69	58.321	ENSPCAG00000006329	RBM15	65	59.665	Procavia_capensis
ENSSDUG00000009424	-	99	56.854	ENSPCOG00000019767	RBM15	94	58.289	Propithecus_coquereli
ENSSDUG00000009424	-	99	57.188	ENSPVAG00000007193	RBM15	93	58.628	Pteropus_vampyrus
ENSSDUG00000009424	-	100	79.860	ENSPNYG00000007434	-	100	79.744	Pundamilia_nyererei
ENSSDUG00000009424	-	100	64.633	ENSPNYG00000005143	rbm15	100	65.193	Pundamilia_nyererei
ENSSDUG00000009424	-	100	66.780	ENSPNAG00000007496	rbm15	100	68.146	Pygocentrus_nattereri
ENSSDUG00000009424	-	99	56.763	ENSRNOG00000047499	Rbm15	95	57.833	Rattus_norvegicus
ENSSDUG00000009424	-	99	56.869	ENSRBIG00000044261	RBM15	94	58.002	Rhinopithecus_bieti
ENSSDUG00000009424	-	99	56.869	ENSRROG00000045519	RBM15	94	58.002	Rhinopithecus_roxellana
ENSSDUG00000009424	-	99	56.976	ENSSBOG00000021394	RBM15	94	58.155	Saimiri_boliviensis_boliviensis
ENSSDUG00000009424	-	100	84.722	ENSSMAG00000000431	-	99	85.069	Scophthalmus_maximus
ENSSDUG00000009424	-	100	66.021	ENSSMAG00000019106	rbm15	100	66.173	Scophthalmus_maximus
ENSSDUG00000009424	-	100	64.760	ENSSLDG00000002691	rbm15	100	65.789	Seriola_lalandi_dorsalis
ENSSDUG00000009424	-	100	99.183	ENSSLDG00000022441	-	100	99.183	Seriola_lalandi_dorsalis
ENSSDUG00000009424	-	87	54.978	ENSSARG00000000360	RBM15	81	57.205	Sorex_araneus
ENSSDUG00000009424	-	100	84.633	ENSSPAG00000007739	-	99	85.099	Stegastes_partitus
ENSSDUG00000009424	-	100	65.332	ENSSPAG00000004965	rbm15	100	66.247	Stegastes_partitus
ENSSDUG00000009424	-	100	57.476	ENSSSCG00000006809	RBM15	100	58.805	Sus_scrofa
ENSSDUG00000009424	-	66	57.429	ENSTGUG00000000886	RBM15	99	58.626	Taeniopygia_guttata
ENSSDUG00000009424	-	100	64.327	ENSTRUG00000002921	rbm15	100	65.362	Takifugu_rubripes
ENSSDUG00000009424	-	99	75.291	ENSTRUG00000007851	-	97	75.291	Takifugu_rubripes
ENSSDUG00000009424	-	100	62.731	ENSTNIG00000015129	rbm15	99	62.457	Tetraodon_nigroviridis
ENSSDUG00000009424	-	99	56.809	ENSTBEG00000008339	RBM15	93	57.985	Tupaia_belangeri
ENSSDUG00000009424	-	99	57.279	ENSTTRG00000001317	RBM15	93	58.369	Tursiops_truncatus
ENSSDUG00000009424	-	100	57.370	ENSUAMG00000017330	RBM15	95	58.503	Ursus_americanus
ENSSDUG00000009424	-	99	57.173	ENSUMAG00000013623	RBM15	94	58.369	Ursus_maritimus
ENSSDUG00000009424	-	99	57.282	ENSVVUG00000002929	RBM15	94	58.324	Vulpes_vulpes
ENSSDUG00000009424	-	100	56.264	ENSXETG00000002029	rbm15	100	56.606	Xenopus_tropicalis
ENSSDUG00000009424	-	100	64.631	ENSXCOG00000006328	rbm15	100	64.631	Xiphophorus_couchianus
ENSSDUG00000009424	-	100	75.291	ENSXCOG00000003003	-	100	74.942	Xiphophorus_couchianus
ENSSDUG00000009424	-	100	75.291	ENSXMAG00000009062	-	100	75.058	Xiphophorus_maculatus
ENSSDUG00000009424	-	100	64.631	ENSXMAG00000020192	rbm15	100	64.631	Xiphophorus_maculatus