EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000009457 (Gene tree)
Gene ID
111230140
Gene Symbol
u2af2a
Alias
wu:fb73g02|zgc:77804
Full Name
splicing factor U2AF 65 kDa subunit
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Minus strand
Length
10175 bases
Position
chrBDQW01000258.1:1544406-1554580
Accession
111230140
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000013064RRM_1PF00076.222e-3513
ENSSDUP00000013064RRM_1PF00076.222e-3523
ENSSDUP00000013064RRM_1PF00076.222e-3533
ENSSDUP00000013043RRM_1PF00076.222.4e-3513
ENSSDUP00000013043RRM_1PF00076.222.4e-3523
ENSSDUP00000013043RRM_1PF00076.222.4e-3533
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000013279-3008XM_022756741ENSSDUP00000013043469 (aa)XP_022612462-
ENSSDUT00000013304-2972-ENSSDUP00000013064457 (aa)--
Gene Model
Click here to download ENSSDUG00000009457's gene model file
Pathways
Pathway IDPathway NameSource
sdu03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000009457's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000009457u2af2a9673.707ENSSDUG00000021434-8279.012
ENSSDUG00000009457u2af2a6337.255ENSSDUG00000009935puf60b6035.294
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000009457u2af2a10089.384ENSG00000063244U2AF29996.471Homo_sapiens
ENSSDUG00000009457u2af2a6794.410ENSAPOG00000023155u2af2a9994.410Acanthochromis_polyacanthus
ENSSDUG00000009457u2af2a10074.894ENSAPOG00000002208-10075.532Acanthochromis_polyacanthus
ENSSDUG00000009457u2af2a7991.111ENSAMEG00000003864U2AF210087.379Ailuropoda_melanoleuca
ENSSDUG00000009457u2af2a9499.534ENSACIG00000005749u2af2a9999.534Amphilophus_citrinellus
ENSSDUG00000009457u2af2a9773.866ENSACIG00000014173-8679.156Amphilophus_citrinellus
ENSSDUG00000009457u2af2a10074.894ENSAOCG00000003595-10075.532Amphiprion_ocellaris
ENSSDUG00000009457u2af2a10099.787ENSAOCG00000015571u2af2a10099.787Amphiprion_ocellaris
ENSSDUG00000009457u2af2a9874.510ENSAPEG00000020062-8481.122Amphiprion_percula
ENSSDUG00000009457u2af2a8999.012ENSAPEG00000009376u2af2a9399.746Amphiprion_percula
ENSSDUG00000009457u2af2a10098.934ENSATEG00000022332u2af2a9998.934Anabas_testudineus
ENSSDUG00000009457u2af2a9675.717ENSATEG00000020577-8681.472Anabas_testudineus
ENSSDUG00000009457u2af2a10089.979ENSACAG00000015489U2AF29989.979Anolis_carolinensis
ENSSDUG00000009457u2af2a10087.778ENSANAG00000028042U2AF29987.778Aotus_nancymaae
ENSSDUG00000009457u2af2a10074.894ENSACLG00000020793-10075.532Astatotilapia_calliptera
ENSSDUG00000009457u2af2a10099.360ENSACLG00000022181u2af2a9999.535Astatotilapia_calliptera
ENSSDUG00000009457u2af2a10091.471ENSAMXG00000033347u2af2a9992.324Astyanax_mexicanus
ENSSDUG00000009457u2af2a10092.576ENSAMXG00000039454u2af2b9992.358Astyanax_mexicanus
ENSSDUG00000009457u2af2a10091.247ENSBTAG00000002830U2AF29991.247Bos_taurus
ENSSDUG00000009457u2af2a8859.000WBGene00006697uaf-110054.730Caenorhabditis_elegans
ENSSDUG00000009457u2af2a10088.842ENSCJAG00000017128U2AF29790.991Callithrix_jacchus
ENSSDUG00000009457u2af2a10089.384ENSCAFG00000002551U2AF29989.384Canis_familiaris
ENSSDUG00000009457u2af2a8693.970ENSCAFG00020015445U2AF28393.970Canis_lupus_dingo
ENSSDUG00000009457u2af2a8678.554ENSCHIG00000023595U2AF28877.833Capra_hircus
ENSSDUG00000009457u2af2a10088.842ENSTSYG00000007432U2AF29990.044Carlito_syrichta
ENSSDUG00000009457u2af2a8892.365ENSCAPG00000008466U2AF29988.840Cavia_aperea
ENSSDUG00000009457u2af2a10088.842ENSCPOG00000001582U2AF29988.842Cavia_porcellus
ENSSDUG00000009457u2af2a10088.842ENSCCAG00000023336U2AF29988.842Cebus_capucinus
ENSSDUG00000009457u2af2a10089.384ENSCATG00000004637U2AF29989.384Cercocebus_atys
ENSSDUG00000009457u2af2a10089.384ENSCLAG00000000596U2AF29989.384Chinchilla_lanigera
ENSSDUG00000009457u2af2a10089.384ENSCSAG00000001722U2AF29989.384Chlorocebus_sabaeus
ENSSDUG00000009457u2af2a9689.438ENSCPBG00000004485U2AF29994.444Chrysemys_picta_bellii
ENSSDUG00000009457u2af2a8569.744ENSCING00000003455-7870.341Ciona_intestinalis
ENSSDUG00000009457u2af2a8569.330ENSCSAVG00000006813-9963.100Ciona_savignyi
ENSSDUG00000009457u2af2a10082.553ENSCANG00000043845-9983.191Colobus_angolensis_palliatus
ENSSDUG00000009457u2af2a9188.578ENSCANG00000031002-9688.578Colobus_angolensis_palliatus
ENSSDUG00000009457u2af2a10091.466ENSCGRG00001003185-9991.466Cricetulus_griseus_chok1gshd
ENSSDUG00000009457u2af2a10080.384ENSCGRG00001007486-9980.384Cricetulus_griseus_chok1gshd
ENSSDUG00000009457u2af2a5092.609ENSCGRG00000004524-7988.525Cricetulus_griseus_crigri
ENSSDUG00000009457u2af2a10080.384ENSCGRG00000018587-9980.384Cricetulus_griseus_crigri
ENSSDUG00000009457u2af2a10072.399ENSCSEG00000020504-8877.919Cynoglossus_semilaevis
ENSSDUG00000009457u2af2a9698.718ENSCSEG00000018709u2af2a9598.718Cynoglossus_semilaevis
ENSSDUG00000009457u2af2a10074.681ENSCVAG00000023307-10074.735Cyprinodon_variegatus
ENSSDUG00000009457u2af2a10099.125ENSCVAG00000001259u2af2a9999.125Cyprinodon_variegatus
ENSSDUG00000009457u2af2a10089.518ENSDARG00000011740u2af2b9988.445Danio_rerio
ENSSDUG00000009457u2af2a10092.241ENSDARG00000012505u2af2a9989.655Danio_rerio
ENSSDUG00000009457u2af2a9188.578ENSDNOG00000047039U2AF29688.578Dasypus_novemcinctus
ENSSDUG00000009457u2af2a10088.842ENSDORG00000003250U2af29988.842Dipodomys_ordii
ENSSDUG00000009457u2af2a9051.142FBgn0034834LS28553.401Drosophila_melanogaster
ENSSDUG00000009457u2af2a9765.111FBgn0005411U2af5010071.429Drosophila_melanogaster
ENSSDUG00000009457u2af2a9174.163ENSEBUG00000010917U2AF28776.203Eptatretus_burgeri
ENSSDUG00000009457u2af2a9159.016ENSEBUG00000001732U2AF28762.785Eptatretus_burgeri
ENSSDUG00000009457u2af2a8991.687ENSEASG00005020708U2AF29089.474Equus_asinus_asinus
ENSSDUG00000009457u2af2a10091.466ENSECAG00000010110U2AF29991.466Equus_caballus
ENSSDUG00000009457u2af2a10073.830ENSELUG00000018459-10073.830Esox_lucius
ENSSDUG00000009457u2af2a10089.371ENSELUG00000022291u2af2b9986.258Esox_lucius
ENSSDUG00000009457u2af2a10095.397ENSELUG00000015850u2af2a9995.397Esox_lucius
ENSSDUG00000009457u2af2a10088.842ENSFCAG00000011504U2AF29988.842Felis_catus
ENSSDUG00000009457u2af2a8892.365ENSFDAG00000011264U2AF29887.983Fukomys_damarensis
ENSSDUG00000009457u2af2a10099.125ENSFHEG00000016025u2af2a9999.125Fundulus_heteroclitus
ENSSDUG00000009457u2af2a10097.397ENSGMOG00000004535u2af2a9997.397Gadus_morhua
ENSSDUG00000009457u2af2a9889.520ENSGALG00000052748U2AF26589.520Gallus_gallus
ENSSDUG00000009457u2af2a10099.125ENSGAFG00000013626u2af2a8899.125Gambusia_affinis
ENSSDUG00000009457u2af2a10075.810ENSGAFG00000005628-10075.693Gambusia_affinis
ENSSDUG00000009457u2af2a10098.690ENSGACG00000010632U2AF29998.690Gasterosteus_aculeatus
ENSSDUG00000009457u2af2a10071.670ENSGACG00000014500-10073.629Gasterosteus_aculeatus
ENSSDUG00000009457u2af2a6794.444ENSGAGG00000011849U2AF29994.444Gopherus_agassizii
ENSSDUG00000009457u2af2a5682.812ENSGGOG00000036399-9682.812Gorilla_gorilla
ENSSDUG00000009457u2af2a10099.360ENSHBUG00000013935u2af2a9999.534Haplochromis_burtoni
ENSSDUG00000009457u2af2a10074.894ENSHBUG00000017424-10075.532Haplochromis_burtoni
ENSSDUG00000009457u2af2a10088.842ENSHGLG00000005889U2AF29988.842Heterocephalus_glaber_female
ENSSDUG00000009457u2af2a8892.365ENSHGLG00100004757U2AF29988.840Heterocephalus_glaber_male
ENSSDUG00000009457u2af2a10096.336ENSHCOG00000019367u2af2a9996.336Hippocampus_comes
ENSSDUG00000009457u2af2a10092.241ENSIPUG00000009077u2af29992.026Ictalurus_punctatus
ENSSDUG00000009457u2af2a10073.742ENSIPUG00000009844-10070.678Ictalurus_punctatus
ENSSDUG00000009457u2af2a10090.693ENSIPUG00000007717u2af2a9990.693Ictalurus_punctatus
ENSSDUG00000009457u2af2a10088.842ENSSTOG00000019595U2AF29988.842Ictidomys_tridecemlineatus
ENSSDUG00000009457u2af2a10088.842ENSJJAG00000017705U2af29988.842Jaculus_jaculus
ENSSDUG00000009457u2af2a10098.294ENSKMAG00000005960u2af2a9998.861Kryptolebias_marmoratus
ENSSDUG00000009457u2af2a9772.414ENSLBEG00000005001-8678.660Labrus_bergylta
ENSSDUG00000009457u2af2a10099.344ENSLBEG00000016162u2af2a9999.344Labrus_bergylta
ENSSDUG00000009457u2af2a8094.809ENSLACG00000001648U2AF29994.809Latimeria_chalumnae
ENSSDUG00000009457u2af2a6096.014ENSLOCG00000008050u2af2b9388.923Lepisosteus_oculatus
ENSSDUG00000009457u2af2a10074.468ENSLOCG00000010843-10074.894Lepisosteus_oculatus
ENSSDUG00000009457u2af2a10078.344ENSLAFG00000028496-9978.344Loxodonta_africana
ENSSDUG00000009457u2af2a10089.597ENSLAFG00000018056-9989.597Loxodonta_africana
ENSSDUG00000009457u2af2a10088.842ENSMFAG00000038383U2AF29988.842Macaca_fascicularis
ENSSDUG00000009457u2af2a10088.632ENSMMUG00000004810U2AF29988.632Macaca_mulatta
ENSSDUG00000009457u2af2a10089.384ENSMNEG00000042096U2AF29989.384Macaca_nemestrina
ENSSDUG00000009457u2af2a8893.035ENSMLEG00000032219U2AF29088.095Mandrillus_leucophaeus
ENSSDUG00000009457u2af2a10097.840ENSMAMG00000019817u2af2a9997.840Mastacembelus_armatus
ENSSDUG00000009457u2af2a10073.561ENSMAMG00000020158-10073.077Mastacembelus_armatus
ENSSDUG00000009457u2af2a10074.894ENSMZEG00005023318-10075.532Maylandia_zebra
ENSSDUG00000009457u2af2a10099.562ENSMZEG00005016563u2af2a9999.562Maylandia_zebra
ENSSDUG00000009457u2af2a8892.365ENSMAUG00000008180U2af29888.865Mesocricetus_auratus
ENSSDUG00000009457u2af2a10089.384ENSMICG00000027681U2AF29989.384Microcebus_murinus
ENSSDUG00000009457u2af2a6791.503ENSMOCG00000001018-9991.503Microtus_ochrogaster
ENSSDUG00000009457u2af2a10081.799ENSMOCG00000007227-9979.872Microtus_ochrogaster
ENSSDUG00000009457u2af2a10088.842ENSMOCG00000013214-9988.842Microtus_ochrogaster
ENSSDUG00000009457u2af2a9599.306ENSMMOG00000016600u2af2a9999.306Mola_mola
ENSSDUG00000009457u2af2a10069.002ENSMMOG00000000531-10069.214Mola_mola
ENSSDUG00000009457u2af2a10098.687ENSMALG00000009985u2af2a9998.687Monopterus_albus
ENSSDUG00000009457u2af2a10089.384MGP_CAROLIEiJ_G0029150U2af29989.384Mus_caroli
ENSSDUG00000009457u2af2a10089.384ENSMUSG00000030435U2af29994.444Mus_musculus
ENSSDUG00000009457u2af2a10089.384MGP_PahariEiJ_G0021017U2af29989.384Mus_pahari
ENSSDUG00000009457u2af2a10089.384MGP_SPRETEiJ_G0030203U2af29989.384Mus_spretus
ENSSDUG00000009457u2af2a10089.384ENSMPUG00000007135U2AF29989.384Mustela_putorius_furo
ENSSDUG00000009457u2af2a5287.917ENSMLUG00000011051-9987.917Myotis_lucifugus
ENSSDUG00000009457u2af2a10088.842ENSNGAG00000020369U2af29988.632Nannospalax_galili
ENSSDUG00000009457u2af2a9674.026ENSNBRG00000011100-8679.404Neolamprologus_brichardi
ENSSDUG00000009457u2af2a10099.360ENSNBRG00000002568u2af2a9999.534Neolamprologus_brichardi
ENSSDUG00000009457u2af2a10076.242ENSNLEG00000010562U2AF29994.444Nomascus_leucogenys
ENSSDUG00000009457u2af2a8878.109ENSMEUG00000002346U2AF28680.051Notamacropus_eugenii
ENSSDUG00000009457u2af2a10083.789ENSODEG00000012729-9983.789Octodon_degus
ENSSDUG00000009457u2af2a9865.556ENSODEG00000009254-9966.444Octodon_degus
ENSSDUG00000009457u2af2a10074.894ENSONIG00000009682-10075.532Oreochromis_niloticus
ENSSDUG00000009457u2af2a10096.822ENSONIG00000012793u2af2a9996.822Oreochromis_niloticus
ENSSDUG00000009457u2af2a10096.383ENSORLG00000011545u2af2a9997.717Oryzias_latipes
ENSSDUG00000009457u2af2a10096.383ENSORLG00020006941u2af2a9997.717Oryzias_latipes_hni
ENSSDUG00000009457u2af2a10096.383ENSORLG00015012843u2af2a9996.383Oryzias_latipes_hsok
ENSSDUG00000009457u2af2a10097.441ENSOMEG00000011386u2af2a9998.621Oryzias_melastigma
ENSSDUG00000009457u2af2a10088.842ENSOGAG00000007206-9988.842Otolemur_garnettii
ENSSDUG00000009457u2af2a9556.009ENSOGAG00000034729-7862.568Otolemur_garnettii
ENSSDUG00000009457u2af2a10079.626ENSOARG00000001091U2AF29977.917Ovis_aries
ENSSDUG00000009457u2af2a10088.842ENSPPAG00000039782U2AF29988.842Pan_paniscus
ENSSDUG00000009457u2af2a10088.842ENSPPRG00000013843U2AF29988.842Panthera_pardus
ENSSDUG00000009457u2af2a9879.393ENSPTIG00000005489U2AF29979.176Panthera_tigris_altaica
ENSSDUG00000009457u2af2a10088.842ENSPTRG00000011523U2AF29994.444Pan_troglodytes
ENSSDUG00000009457u2af2a10089.384ENSPANG00000008459U2AF29989.384Papio_anubis
ENSSDUG00000009457u2af2a10092.569ENSPKIG00000024346u2af2b9197.722Paramormyrops_kingsleyae
ENSSDUG00000009457u2af2a10074.947ENSPKIG00000014878-10073.561Paramormyrops_kingsleyae
ENSSDUG00000009457u2af2a8672.127ENSPSIG00000008014U2AF29970.362Pelodiscus_sinensis
ENSSDUG00000009457u2af2a9691.314ENSPMGG00000022980u2af2a9991.314Periophthalmus_magnuspinnatus
ENSSDUG00000009457u2af2a10088.842ENSPEMG00000007378U2af29994.444Peromyscus_maniculatus_bairdii
ENSSDUG00000009457u2af2a8377.083ENSPMAG00000004097u2af2a10070.870Petromyzon_marinus
ENSSDUG00000009457u2af2a10088.632ENSPCIG00000018013U2AF29988.632Phascolarctos_cinereus
ENSSDUG00000009457u2af2a10098.934ENSPFOG00000010799u2af2a10098.934Poecilia_formosa
ENSSDUG00000009457u2af2a10075.271ENSPFOG00000006433-10075.693Poecilia_formosa
ENSSDUG00000009457u2af2a10099.125ENSPLAG00000014365u2af2a9999.125Poecilia_latipinna
ENSSDUG00000009457u2af2a8780.808ENSPLAG00000003275-8781.218Poecilia_latipinna
ENSSDUG00000009457u2af2a10099.125ENSPMEG00000002969u2af2a9999.125Poecilia_mexicana
ENSSDUG00000009457u2af2a8780.556ENSPMEG00000003734-8780.964Poecilia_mexicana
ENSSDUG00000009457u2af2a10098.934ENSPREG00000008739u2af2a9999.317Poecilia_reticulata
ENSSDUG00000009457u2af2a10074.414ENSPREG00000013036-10075.000Poecilia_reticulata
ENSSDUG00000009457u2af2a6091.336ENSPPYG00000010429-7891.336Pongo_abelii
ENSSDUG00000009457u2af2a8679.592ENSPCAG00000003709-9679.592Procavia_capensis
ENSSDUG00000009457u2af2a10072.269ENSPCAG00000014399-9972.269Procavia_capensis
ENSSDUG00000009457u2af2a10088.842ENSPCOG00000025870U2AF29988.842Propithecus_coquereli
ENSSDUG00000009457u2af2a10088.421ENSPVAG00000004540U2AF29988.421Pteropus_vampyrus
ENSSDUG00000009457u2af2a10074.894ENSPNYG00000011605-10075.532Pundamilia_nyererei
ENSSDUG00000009457u2af2a10099.360ENSPNYG00000001438u2af2a9999.534Pundamilia_nyererei
ENSSDUG00000009457u2af2a10093.231ENSPNAG00000027289u2af2b9993.013Pygocentrus_nattereri
ENSSDUG00000009457u2af2a10092.857ENSPNAG00000017620u2af2a9990.476Pygocentrus_nattereri
ENSSDUG00000009457u2af2a10075.532ENSPNAG00000007182-10073.932Pygocentrus_nattereri
ENSSDUG00000009457u2af2a10089.384ENSRNOG00000015914U2af29989.384Rattus_norvegicus
ENSSDUG00000009457u2af2a10088.632ENSRBIG00000041018U2AF29988.632Rhinopithecus_bieti
ENSSDUG00000009457u2af2a8787.923ENSRROG00000031103-10087.923Rhinopithecus_roxellana
ENSSDUG00000009457u2af2a10084.713ENSRROG00000031238-9984.713Rhinopithecus_roxellana
ENSSDUG00000009457u2af2a10089.384ENSSBOG00000023891U2AF29989.384Saimiri_boliviensis_boliviensis
ENSSDUG00000009457u2af2a5380.070ENSSHAG00000001167U2AF26679.861Sarcophilus_harrisii
ENSSDUG00000009457u2af2a10074.841ENSSFOG00015003884-9480.357Scleropages_formosus
ENSSDUG00000009457u2af2a8797.236ENSSFOG00015019182u2af2b9097.236Scleropages_formosus
ENSSDUG00000009457u2af2a10099.127ENSSMAG00000012582u2af2a9999.127Scophthalmus_maximus
ENSSDUG00000009457u2af2a10074.043ENSSMAG00000013779-10075.319Scophthalmus_maximus
ENSSDUG00000009457u2af2a100100.000ENSSLDG00000022742u2af2a99100.000Seriola_lalandi_dorsalis
ENSSDUG00000009457u2af2a9673.707ENSSLDG00000016151-8679.012Seriola_lalandi_dorsalis
ENSSDUG00000009457u2af2a10088.608ENSSPUG00000010229U2AF29988.608Sphenodon_punctatus
ENSSDUG00000009457u2af2a10075.106ENSSPAG00000005241-10075.745Stegastes_partitus
ENSSDUG00000009457u2af2a10099.787ENSSPAG00000022519u2af2a9999.787Stegastes_partitus
ENSSDUG00000009457u2af2a10091.466ENSSSCG00000034815U2AF29991.466Sus_scrofa
ENSSDUG00000009457u2af2a9696.825ENSTRUG00000005514u2af2a9896.825Takifugu_rubripes
ENSSDUG00000009457u2af2a10096.809ENSTNIG00000008106U2AF29996.809Tetraodon_nigroviridis
ENSSDUG00000009457u2af2a10072.885ENSTNIG00000011257-10073.810Tetraodon_nigroviridis
ENSSDUG00000009457u2af2a7987.363ENSTBEG00000009104U2AF29689.014Tupaia_belangeri
ENSSDUG00000009457u2af2a10088.842ENSTTRG00000000987U2AF29988.842Tursiops_truncatus
ENSSDUG00000009457u2af2a8693.955ENSUAMG00000019883U2AF28893.500Ursus_americanus
ENSSDUG00000009457u2af2a8693.955ENSUMAG00000024586U2AF29994.444Ursus_maritimus
ENSSDUG00000009457u2af2a8893.035ENSVVUG00000006956U2AF26889.059Vulpes_vulpes
ENSSDUG00000009457u2af2a10088.841ENSXETG00000019128u2af29988.841Xenopus_tropicalis
ENSSDUG00000009457u2af2a9699.315ENSXCOG00000019406u2af2a9999.315Xiphophorus_couchianus
ENSSDUG00000009457u2af2a10099.125ENSXMAG00000011979u2af2a9999.125Xiphophorus_maculatus
ENSSDUG00000009457u2af2a10074.043ENSXMAG00000000768-9673.077Xiphophorus_maculatus

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