EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000009511 (Gene tree)
Gene ID: 111223700
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 2-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 48108 bases
Position: chrBDQW01000113.1:2451903-2500010
Accession: 111223700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000013111	Fox-1_C	PF12414.8	2.9e-38	1	1
ENSSDUP00000013090	Fox-1_C	PF12414.8	4.7e-36	1	1
ENSSDUP00000013090	RRM_1	PF00076.22	2.4e-18	1	1
ENSSDUP00000013111	RRM_1	PF00076.22	2.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000013352	-	6341	XM_022747938	ENSSDUP00000013111	462 (aa)	XP_022603659	UPI000BBEC9EB
ENSSDUT00000013331	-	6341	-	ENSSDUP00000013090	462 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000009511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000009511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000009511	-	100	74.414	ENSSDUG00000004292	rbfox2	100	72.318
ENSSDUG00000009511	-	78	51.777	ENSSDUG00000016413	rbfox1	70	57.732
ENSSDUG00000009511	-	62	60.473	ENSSDUG00000015801	-	69	62.182
ENSSDUG00000009511	-	56	58.427	ENSSDUG00000008705	rbfox1l	63	57.795
ENSSDUG00000009511	-	72	49.854	ENSSDUG00000023183	rbfox3b	68	55.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000009511	-	92	58.190	ENSG00000100320	RBFOX2	99	59.839	Homo_sapiens
ENSSDUG00000009511	-	100	96.328	ENSAPOG00000021561	-	100	96.328	Acanthochromis_polyacanthus
ENSSDUG00000009511	-	100	73.774	ENSAPOG00000004877	rbfox2	100	72.532	Acanthochromis_polyacanthus
ENSSDUG00000009511	-	62	68.111	ENSAMEG00000007228	RBFOX2	94	67.000	Ailuropoda_melanoleuca
ENSSDUG00000009511	-	50	71.552	ENSACIG00000001690	rbfox2	90	66.403	Amphilophus_citrinellus
ENSSDUG00000009511	-	100	95.032	ENSAOCG00000015358	-	100	94.816	Amphiprion_ocellaris
ENSSDUG00000009511	-	100	73.561	ENSAOCG00000013752	rbfox2	100	72.688	Amphiprion_ocellaris
ENSSDUG00000009511	-	100	95.032	ENSAPEG00000013905	-	100	94.816	Amphiprion_percula
ENSSDUG00000009511	-	100	73.774	ENSAPEG00000022359	rbfox2	100	72.532	Amphiprion_percula
ENSSDUG00000009511	-	100	72.650	ENSATEG00000021951	rbfox2	100	72.318	Anabas_testudineus
ENSSDUG00000009511	-	100	94.372	ENSATEG00000009959	-	100	94.156	Anabas_testudineus
ENSSDUG00000009511	-	72	61.968	ENSAPLG00000007609	RBFOX2	73	67.568	Anas_platyrhynchos
ENSSDUG00000009511	-	92	58.030	ENSACAG00000016535	RBFOX2	96	55.142	Anolis_carolinensis
ENSSDUG00000009511	-	63	67.692	ENSANAG00000015245	RBFOX2	99	63.975	Aotus_nancymaae
ENSSDUG00000009511	-	100	72.979	ENSACLG00000009744	rbfox2	100	70.664	Astatotilapia_calliptera
ENSSDUG00000009511	-	100	93.952	ENSACLG00000017380	-	100	94.168	Astatotilapia_calliptera
ENSSDUG00000009511	-	100	72.881	ENSAMXG00000011451	rbfox2	96	78.481	Astyanax_mexicanus
ENSSDUG00000009511	-	92	57.816	ENSBTAG00000020125	RBFOX2	96	54.644	Bos_taurus
ENSSDUG00000009511	-	72	62.060	ENSCJAG00000038886	-	88	58.743	Callithrix_jacchus
ENSSDUG00000009511	-	91	58.621	ENSCJAG00000019456	-	91	58.649	Callithrix_jacchus
ENSSDUG00000009511	-	72	62.703	ENSCAFG00000001701	RBFOX2	73	67.568	Canis_familiaris
ENSSDUG00000009511	-	92	51.522	ENSCAFG00020004541	RBFOX2	96	48.904	Canis_lupus_dingo
ENSSDUG00000009511	-	92	57.883	ENSCHIG00000014027	RBFOX2	96	56.479	Capra_hircus
ENSSDUG00000009511	-	81	61.391	ENSTSYG00000014123	RBFOX2	100	57.488	Carlito_syrichta
ENSSDUG00000009511	-	70	61.128	ENSCAPG00000014308	RBFOX2	68	65.019	Cavia_aperea
ENSSDUG00000009511	-	72	62.162	ENSCPOG00000022180	RBFOX2	74	65.878	Cavia_porcellus
ENSSDUG00000009511	-	92	58.710	ENSCCAG00000036584	RBFOX2	96	55.172	Cebus_capucinus
ENSSDUG00000009511	-	92	56.739	ENSCATG00000038655	RBFOX2	97	57.073	Cercocebus_atys
ENSSDUG00000009511	-	78	59.799	ENSCLAG00000017106	RBFOX2	74	65.878	Chinchilla_lanigera
ENSSDUG00000009511	-	66	58.944	ENSCSAG00000008110	RBFOX2	87	57.567	Chlorocebus_sabaeus
ENSSDUG00000009511	-	66	56.598	ENSCHOG00000002887	RBFOX2	99	55.389	Choloepus_hoffmanni
ENSSDUG00000009511	-	72	62.432	ENSCPBG00000023144	RBFOX2	77	67.568	Chrysemys_picta_bellii
ENSSDUG00000009511	-	81	61.631	ENSCANG00000035832	RBFOX2	100	57.971	Colobus_angolensis_palliatus
ENSSDUG00000009511	-	92	58.099	ENSCGRG00001017727	Rbfox2	97	55.217	Cricetulus_griseus_chok1gshd
ENSSDUG00000009511	-	72	62.069	ENSCGRG00000014237	Rbfox2	85	55.193	Cricetulus_griseus_crigri
ENSSDUG00000009511	-	100	68.347	ENSCSEG00000007748	rbfox2	100	68.283	Cynoglossus_semilaevis
ENSSDUG00000009511	-	97	92.478	ENSCSEG00000007360	-	100	90.566	Cynoglossus_semilaevis
ENSSDUG00000009511	-	78	79.189	ENSCVAG00000016503	-	98	77.838	Cyprinodon_variegatus
ENSSDUG00000009511	-	51	77.823	ENSDARG00000052182	rbfox2	100	77.459	Danio_rerio
ENSSDUG00000009511	-	72	62.703	ENSDNOG00000004372	RBFOX2	70	67.568	Dasypus_novemcinctus
ENSSDUG00000009511	-	72	58.108	ENSDORG00000015003	Rbfox2	76	64.189	Dipodomys_ordii
ENSSDUG00000009511	-	72	75.524	ENSETEG00000005638	RBFOX2	83	66.429	Echinops_telfairi
ENSSDUG00000009511	-	92	58.351	ENSEASG00005018920	RBFOX2	96	55.435	Equus_asinus_asinus
ENSSDUG00000009511	-	92	58.351	ENSECAG00000018923	RBFOX2	96	55.435	Equus_caballus
ENSSDUG00000009511	-	78	55.335	ENSEEUG00000004549	RBFOX2	100	51.629	Erinaceus_europaeus
ENSSDUG00000009511	-	51	75.104	ENSELUG00000000102	rbfox2	100	74.689	Esox_lucius
ENSSDUG00000009511	-	100	75.460	ENSELUG00000009404	-	100	74.280	Esox_lucius
ENSSDUG00000009511	-	92	57.447	ENSFCAG00000010061	RBFOX2	96	54.741	Felis_catus
ENSSDUG00000009511	-	72	62.162	ENSFALG00000013111	RBFOX2	72	67.568	Ficedula_albicollis
ENSSDUG00000009511	-	100	74.200	ENSFHEG00000010546	rbfox2	100	71.795	Fundulus_heteroclitus
ENSSDUG00000009511	-	79	58.040	ENSGMOG00000005278	rbfox2	99	55.471	Gadus_morhua
ENSSDUG00000009511	-	65	51.163	ENSGALG00000012540	RBFOX2	57	65.919	Gallus_gallus
ENSSDUG00000009511	-	53	75.304	ENSGAFG00000017428	-	95	73.279	Gambusia_affinis
ENSSDUG00000009511	-	79	62.562	ENSGACG00000015968	rbfox2	99	58.968	Gasterosteus_aculeatus
ENSSDUG00000009511	-	79	71.867	ENSGACG00000007174	-	99	71.979	Gasterosteus_aculeatus
ENSSDUG00000009511	-	72	62.432	ENSGAGG00000025884	RBFOX2	73	67.568	Gopherus_agassizii
ENSSDUG00000009511	-	92	58.190	ENSGGOG00000037332	RBFOX2	96	55.098	Gorilla_gorilla
ENSSDUG00000009511	-	100	94.384	ENSHBUG00000000856	-	100	93.305	Haplochromis_burtoni
ENSSDUG00000009511	-	100	72.979	ENSHBUG00000004356	rbfox2	100	70.664	Haplochromis_burtoni
ENSSDUG00000009511	-	92	56.103	ENSHGLG00000012907	RBFOX2	99	58.191	Heterocephalus_glaber_female
ENSSDUG00000009511	-	72	62.032	ENSHGLG00100009986	RBFOX2	85	55.490	Heterocephalus_glaber_male
ENSSDUG00000009511	-	100	71.489	ENSHCOG00000016102	rbfox2	100	69.593	Hippocampus_comes
ENSSDUG00000009511	-	100	86.910	ENSHCOG00000005662	-	100	86.910	Hippocampus_comes
ENSSDUG00000009511	-	100	69.665	ENSIPUG00000016896	rbfox2	94	79.478	Ictalurus_punctatus
ENSSDUG00000009511	-	72	60.270	ENSSTOG00000014841	RBFOX2	85	55.193	Ictidomys_tridecemlineatus
ENSSDUG00000009511	-	72	61.035	ENSJJAG00000014885	Rbfox2	73	67.905	Jaculus_jaculus
ENSSDUG00000009511	-	100	89.362	ENSKMAG00000013354	-	100	88.511	Kryptolebias_marmoratus
ENSSDUG00000009511	-	100	71.915	ENSKMAG00000021880	-	100	70.815	Kryptolebias_marmoratus
ENSSDUG00000009511	-	66	58.621	ENSLACG00000003339	RBFOX2	79	58.025	Latimeria_chalumnae
ENSSDUG00000009511	-	72	60.695	ENSLAFG00000027140	RBFOX2	75	66.333	Loxodonta_africana
ENSSDUG00000009511	-	92	56.739	ENSMFAG00000031994	RBFOX2	96	58.293	Macaca_fascicularis
ENSSDUG00000009511	-	72	62.973	ENSMMUG00000014010	RBFOX2	90	59.016	Macaca_mulatta
ENSSDUG00000009511	-	92	56.466	ENSMNEG00000034388	RBFOX2	97	56.763	Macaca_nemestrina
ENSSDUG00000009511	-	81	61.631	ENSMLEG00000005854	RBFOX2	100	57.971	Mandrillus_leucophaeus
ENSSDUG00000009511	-	100	87.716	ENSMAMG00000008980	-	100	88.578	Mastacembelus_armatus
ENSSDUG00000009511	-	100	73.729	ENSMAMG00000004293	rbfox2	100	72.805	Mastacembelus_armatus
ENSSDUG00000009511	-	100	72.495	ENSMZEG00005023838	rbfox2	100	71.030	Maylandia_zebra
ENSSDUG00000009511	-	100	93.952	ENSMZEG00005004959	-	100	94.168	Maylandia_zebra
ENSSDUG00000009511	-	78	59.548	ENSMAUG00000018816	Rbfox2	73	65.878	Mesocricetus_auratus
ENSSDUG00000009511	-	92	58.280	ENSMICG00000035417	RBFOX2	96	55.172	Microcebus_murinus
ENSSDUG00000009511	-	60	47.436	ENSMICG00000046341	-	50	54.930	Microcebus_murinus
ENSSDUG00000009511	-	72	60.270	ENSMOCG00000009327	Rbfox2	73	65.878	Microtus_ochrogaster
ENSSDUG00000009511	-	51	71.667	ENSMMOG00000008287	rbfox2	100	69.198	Mola_mola
ENSSDUG00000009511	-	72	60.313	ENSMODG00000001122	RBFOX2	76	64.839	Monodelphis_domestica
ENSSDUG00000009511	-	51	81.967	ENSMALG00000000623	rbfox2	100	80.000	Monopterus_albus
ENSSDUG00000009511	-	92	57.609	MGP_CAROLIEiJ_G0019957	Rbfox2	96	54.783	Mus_caroli
ENSSDUG00000009511	-	92	57.328	ENSMUSG00000033565	Rbfox2	98	54.487	Mus_musculus
ENSSDUG00000009511	-	92	57.391	MGP_PahariEiJ_G0019967	Rbfox2	96	54.684	Mus_pahari
ENSSDUG00000009511	-	92	57.609	MGP_SPRETEiJ_G0020860	Rbfox2	96	54.783	Mus_spretus
ENSSDUG00000009511	-	81	60.911	ENSMPUG00000012555	RBFOX2	97	57.971	Mustela_putorius_furo
ENSSDUG00000009511	-	81	59.762	ENSMLUG00000002676	RBFOX2	98	57.794	Myotis_lucifugus
ENSSDUG00000009511	-	72	59.730	ENSNGAG00000020528	Rbfox2	73	65.878	Nannospalax_galili
ENSSDUG00000009511	-	100	73.134	ENSNBRG00000018155	rbfox2	100	71.674	Neolamprologus_brichardi
ENSSDUG00000009511	-	84	93.830	ENSNBRG00000001568	-	89	93.814	Neolamprologus_brichardi
ENSSDUG00000009511	-	85	59.540	ENSNLEG00000034979	RBFOX2	100	56.250	Nomascus_leucogenys
ENSSDUG00000009511	-	81	58.034	ENSMEUG00000001547	RBFOX2	100	54.589	Notamacropus_eugenii
ENSSDUG00000009511	-	83	78.947	ENSOPRG00000014878	RBFOX2	81	67.391	Ochotona_princeps
ENSSDUG00000009511	-	92	57.849	ENSODEG00000009937	RBFOX2	96	54.741	Octodon_degus
ENSSDUG00000009511	-	78	82.697	ENSONIG00000008341	-	99	80.741	Oreochromis_niloticus
ENSSDUG00000009511	-	79	65.602	ENSONIG00000017998	rbfox2	97	64.109	Oreochromis_niloticus
ENSSDUG00000009511	-	56	59.524	ENSOANG00000007489	RBFOX2	66	70.320	Ornithorhynchus_anatinus
ENSSDUG00000009511	-	81	53.938	ENSOCUG00000001349	RBFOX2	97	51.332	Oryctolagus_cuniculus
ENSSDUG00000009511	-	100	90.558	ENSORLG00000014948	-	100	89.914	Oryzias_latipes
ENSSDUG00000009511	-	100	72.340	ENSORLG00000028082	rbfox2	100	69.703	Oryzias_latipes
ENSSDUG00000009511	-	100	72.553	ENSORLG00020008976	rbfox2	100	69.703	Oryzias_latipes_hni
ENSSDUG00000009511	-	100	90.558	ENSORLG00020005676	-	100	89.914	Oryzias_latipes_hni
ENSSDUG00000009511	-	100	90.558	ENSORLG00015000797	-	100	89.914	Oryzias_latipes_hsok
ENSSDUG00000009511	-	100	72.553	ENSORLG00015007027	rbfox2	100	69.703	Oryzias_latipes_hsok
ENSSDUG00000009511	-	100	72.495	ENSOMEG00000015966	rbfox2	100	70.127	Oryzias_melastigma
ENSSDUG00000009511	-	100	92.043	ENSOMEG00000007909	-	100	92.043	Oryzias_melastigma
ENSSDUG00000009511	-	72	62.299	ENSOGAG00000033250	RBFOX2	74	67.000	Otolemur_garnettii
ENSSDUG00000009511	-	72	61.559	ENSOARG00000018669	RBFOX2	73	65.552	Ovis_aries
ENSSDUG00000009511	-	82	61.429	ENSPPAG00000035653	RBFOX2	98	57.794	Pan_paniscus
ENSSDUG00000009511	-	92	57.660	ENSPPRG00000015635	RBFOX2	96	54.957	Panthera_pardus
ENSSDUG00000009511	-	72	61.804	ENSPTIG00000019147	RBFOX2	74	67.000	Panthera_tigris_altaica
ENSSDUG00000009511	-	92	58.190	ENSPTRG00000014305	RBFOX2	96	55.098	Pan_troglodytes
ENSSDUG00000009511	-	92	58.405	ENSPANG00000007030	RBFOX2	97	56.763	Papio_anubis
ENSSDUG00000009511	-	56	66.436	ENSPKIG00000010816	-	99	58.290	Paramormyrops_kingsleyae
ENSSDUG00000009511	-	100	67.591	ENSPKIG00000006854	-	100	65.236	Paramormyrops_kingsleyae
ENSSDUG00000009511	-	72	62.432	ENSPSIG00000017828	RBFOX2	73	67.568	Pelodiscus_sinensis
ENSSDUG00000009511	-	51	78.926	ENSPMGG00000007138	rbfox2	100	77.637	Periophthalmus_magnuspinnatus
ENSSDUG00000009511	-	62	86.897	ENSPMGG00000016969	-	87	83.737	Periophthalmus_magnuspinnatus
ENSSDUG00000009511	-	72	60.270	ENSPEMG00000012542	Rbfox2	73	65.878	Peromyscus_maniculatus_bairdii
ENSSDUG00000009511	-	82	60.432	ENSPCIG00000021550	RBFOX2	94	57.664	Phascolarctos_cinereus
ENSSDUG00000009511	-	100	73.404	ENSPFOG00000014209	rbfox2	100	71.734	Poecilia_formosa
ENSSDUG00000009511	-	69	92.879	ENSPFOG00000001869	-	100	91.022	Poecilia_formosa
ENSSDUG00000009511	-	51	97.071	ENSPLAG00000002710	-	100	97.071	Poecilia_latipinna
ENSSDUG00000009511	-	51	79.253	ENSPLAG00000017308	rbfox2	100	76.667	Poecilia_latipinna
ENSSDUG00000009511	-	51	80.738	ENSPMEG00000007320	rbfox2	100	78.750	Poecilia_mexicana
ENSSDUG00000009511	-	51	96.667	ENSPMEG00000013663	-	100	96.667	Poecilia_mexicana
ENSSDUG00000009511	-	51	78.512	ENSPREG00000012955	rbfox2	100	77.215	Poecilia_reticulata
ENSSDUG00000009511	-	92	58.190	ENSPPYG00000011766	RBFOX2	96	55.098	Pongo_abelii
ENSSDUG00000009511	-	72	58.649	ENSPCOG00000016273	RBFOX2	73	62.500	Propithecus_coquereli
ENSSDUG00000009511	-	51	68.015	ENSPVAG00000015844	RBFOX2	66	63.569	Pteropus_vampyrus
ENSSDUG00000009511	-	100	94.181	ENSPNYG00000020595	-	100	92.888	Pundamilia_nyererei
ENSSDUG00000009511	-	100	73.191	ENSPNYG00000016161	rbfox2	100	71.734	Pundamilia_nyererei
ENSSDUG00000009511	-	100	65.466	ENSPNAG00000000168	rbfox2	100	63.812	Pygocentrus_nattereri
ENSSDUG00000009511	-	99	59.746	ENSPNAG00000014196	-	100	57.265	Pygocentrus_nattereri
ENSSDUG00000009511	-	81	58.838	ENSRNOG00000004688	Rbfox2	97	56.585	Rattus_norvegicus
ENSSDUG00000009511	-	72	62.331	ENSRBIG00000033696	RBFOX2	73	67.568	Rhinopithecus_bieti
ENSSDUG00000009511	-	92	58.190	ENSRROG00000035715	RBFOX2	96	55.098	Rhinopithecus_roxellana
ENSSDUG00000009511	-	81	61.408	ENSSBOG00000028291	RBFOX2	99	58.049	Saimiri_boliviensis_boliviensis
ENSSDUG00000009511	-	81	60.628	ENSSHAG00000006835	RBFOX2	97	57.421	Sarcophilus_harrisii
ENSSDUG00000009511	-	52	80.000	ENSSFOG00015013291	-	76	78.059	Scleropages_formosus
ENSSDUG00000009511	-	100	66.245	ENSSFOG00015010482	-	99	72.800	Scleropages_formosus
ENSSDUG00000009511	-	100	90.129	ENSSMAG00000004317	-	100	89.485	Scophthalmus_maximus
ENSSDUG00000009511	-	100	73.291	ENSSMAG00000013662	rbfox2	100	71.767	Scophthalmus_maximus
ENSSDUG00000009511	-	85	74.185	ENSSLDG00000023983	rbfox2	83	75.510	Seriola_lalandi_dorsalis
ENSSDUG00000009511	-	100	99.351	ENSSLDG00000018052	-	100	99.351	Seriola_lalandi_dorsalis
ENSSDUG00000009511	-	56	57.679	ENSSPUG00000011797	RBFOX2	57	66.968	Sphenodon_punctatus
ENSSDUG00000009511	-	100	73.774	ENSSPAG00000013681	rbfox2	100	72.688	Stegastes_partitus
ENSSDUG00000009511	-	100	96.328	ENSSPAG00000016272	-	100	96.328	Stegastes_partitus
ENSSDUG00000009511	-	81	61.017	ENSSSCG00000000152	RBFOX2	96	58.049	Sus_scrofa
ENSSDUG00000009511	-	72	62.162	ENSTGUG00000010808	RBFOX2	75	67.568	Taeniopygia_guttata
ENSSDUG00000009511	-	79	67.008	ENSTRUG00000007739	-	97	63.918	Takifugu_rubripes
ENSSDUG00000009511	-	55	80.508	ENSTBEG00000003297	-	58	90.000	Tupaia_belangeri
ENSSDUG00000009511	-	81	61.151	ENSTTRG00000006922	RBFOX2	100	57.971	Tursiops_truncatus
ENSSDUG00000009511	-	70	60.606	ENSUAMG00000010612	RBFOX2	70	65.398	Ursus_americanus
ENSSDUG00000009511	-	56	59.524	ENSUMAG00000016785	RBFOX2	55	70.320	Ursus_maritimus
ENSSDUG00000009511	-	81	56.115	ENSVPAG00000002824	RBFOX2	100	53.865	Vicugna_pacos
ENSSDUG00000009511	-	83	60.422	ENSVVUG00000023561	RBFOX2	100	56.738	Vulpes_vulpes
ENSSDUG00000009511	-	69	62.890	ENSXETG00000000231	rbfox2	75	65.320	Xenopus_tropicalis
ENSSDUG00000009511	-	58	97.674	ENSXCOG00000015905	-	84	97.674	Xiphophorus_couchianus
ENSSDUG00000009511	-	100	87.983	ENSXMAG00000026769	-	100	87.554	Xiphophorus_maculatus
ENSSDUG00000009511	-	78	72.900	ENSXMAG00000029498	rbfox2	90	71.038	Xiphophorus_maculatus