EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000009685 (Gene tree)
Gene ID: 111232835
Gene Symbol: farsb
Alias: cb428|farsl|zgc:92055
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 17960 bases
Position: chrBDQW01000337.1:236686-254645
Accession: 111232835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000013379	B3_4	PF03483.17	9e-27	1	1
ENSSDUP00000013415	B3_4	PF03483.17	3.7e-25	1	1
ENSSDUP00000013415	B5	PF03484.15	1.7e-15	1	1
ENSSDUP00000013379	B5	PF03484.15	3.9e-15	1	1
ENSSDUP00000013379	EF1_GNE	PF00736.19	6.3e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000013619	-	2962	XM_022760497	ENSSDUP00000013379	838 (aa)	XP_022616218	-
ENSSDUT00000013661	-	1773	-	ENSSDUP00000013415	590 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000009685's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000009685's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000009685	farsb	100	73.993	ENSG00000116120	FARSB	100	77.703	Homo_sapiens
ENSSDUG00000009685	farsb	100	93.079	ENSAPOG00000013072	farsb	98	93.079	Acanthochromis_polyacanthus
ENSSDUG00000009685	farsb	100	73.826	ENSAMEG00000005984	FARSB	100	77.534	Ailuropoda_melanoleuca
ENSSDUG00000009685	farsb	100	87.817	ENSACIG00000021623	farsb	100	90.492	Amphilophus_citrinellus
ENSSDUG00000009685	farsb	100	92.721	ENSAOCG00000004912	farsb	100	91.341	Amphiprion_ocellaris
ENSSDUG00000009685	farsb	100	92.721	ENSAPEG00000001153	farsb	98	92.721	Amphiprion_percula
ENSSDUG00000009685	farsb	100	91.169	ENSATEG00000021441	farsb	98	91.050	Anabas_testudineus
ENSSDUG00000009685	farsb	99	72.449	ENSAPLG00000010292	FARSB	99	77.015	Anas_platyrhynchos
ENSSDUG00000009685	farsb	100	73.524	ENSACAG00000004769	FARSB	98	77.419	Anolis_carolinensis
ENSSDUG00000009685	farsb	100	73.401	ENSANAG00000024637	FARSB	100	77.119	Aotus_nancymaae
ENSSDUG00000009685	farsb	100	89.976	ENSACLG00000013951	farsb	100	91.343	Astatotilapia_calliptera
ENSSDUG00000009685	farsb	85	76.846	ENSAMXG00000033881	farsb	100	82.365	Astyanax_mexicanus
ENSSDUG00000009685	farsb	96	72.855	ENSBTAG00000045523	-	100	76.543	Bos_taurus
ENSSDUG00000009685	farsb	100	74.161	ENSBTAG00000011649	FARSB	100	77.703	Bos_taurus
ENSSDUG00000009685	farsb	100	55.444	WBGene00001498	fars-3	100	58.446	Caenorhabditis_elegans
ENSSDUG00000009685	farsb	100	73.993	ENSCJAG00000012181	FARSB	100	77.703	Callithrix_jacchus
ENSSDUG00000009685	farsb	100	74.329	ENSCAFG00000016094	-	100	78.041	Canis_familiaris
ENSSDUG00000009685	farsb	100	71.597	ENSCAFG00020026684	FARSB	100	77.562	Canis_lupus_dingo
ENSSDUG00000009685	farsb	100	74.329	ENSCHIG00000014275	FARSB	100	78.041	Capra_hircus
ENSSDUG00000009685	farsb	100	73.826	ENSTSYG00000008461	FARSB	100	77.027	Carlito_syrichta
ENSSDUG00000009685	farsb	96	69.324	ENSCAPG00000016436	FARSB	99	70.537	Cavia_aperea
ENSSDUG00000009685	farsb	100	73.826	ENSCPOG00000013109	FARSB	100	77.027	Cavia_porcellus
ENSSDUG00000009685	farsb	100	69.463	ENSCCAG00000025840	FARSB	100	73.142	Cebus_capucinus
ENSSDUG00000009685	farsb	100	73.993	ENSCATG00000036168	FARSB	100	77.703	Cercocebus_atys
ENSSDUG00000009685	farsb	100	74.329	ENSCLAG00000011954	FARSB	100	77.872	Chinchilla_lanigera
ENSSDUG00000009685	farsb	100	73.993	ENSCSAG00000007806	FARSB	100	77.703	Chlorocebus_sabaeus
ENSSDUG00000009685	farsb	81	89.773	ENSCHOG00000011785	FARSB	81	89.773	Choloepus_hoffmanni
ENSSDUG00000009685	farsb	100	73.445	ENSCPBG00000019346	FARSB	98	78.268	Chrysemys_picta_bellii
ENSSDUG00000009685	farsb	99	59.106	ENSCING00000004180	-	99	61.371	Ciona_intestinalis
ENSSDUG00000009685	farsb	99	59.867	ENSCSAVG00000005346	-	99	61.873	Ciona_savignyi
ENSSDUG00000009685	farsb	97	73.438	ENSCANG00000036239	FARSB	100	77.273	Colobus_angolensis_palliatus
ENSSDUG00000009685	farsb	100	74.916	ENSCGRG00001022928	Farsb	100	78.644	Cricetulus_griseus_chok1gshd
ENSSDUG00000009685	farsb	100	74.916	ENSCGRG00000001513	Farsb	100	78.644	Cricetulus_griseus_crigri
ENSSDUG00000009685	farsb	100	87.227	ENSCSEG00000005415	farsb	100	92.320	Cynoglossus_semilaevis
ENSSDUG00000009685	farsb	76	80.702	ENSCVAG00000018815	farsb	98	86.889	Cyprinodon_variegatus
ENSSDUG00000009685	farsb	100	79.392	ENSDARG00000016864	farsb	100	84.237	Danio_rerio
ENSSDUG00000009685	farsb	100	73.658	ENSDNOG00000002511	FARSB	100	76.858	Dasypus_novemcinctus
ENSSDUG00000009685	farsb	100	73.782	ENSDORG00000011102	Farsb	100	77.196	Dipodomys_ordii
ENSSDUG00000009685	farsb	100	60.738	FBgn0039175	beta-PheRS	100	64.081	Drosophila_melanogaster
ENSSDUG00000009685	farsb	97	71.181	ENSETEG00000015080	FARSB	100	75.350	Echinops_telfairi
ENSSDUG00000009685	farsb	100	60.403	ENSEBUG00000006846	farsb	100	64.746	Eptatretus_burgeri
ENSSDUG00000009685	farsb	100	74.161	ENSEASG00005011297	FARSB	100	77.872	Equus_asinus_asinus
ENSSDUG00000009685	farsb	100	71.637	ENSECAG00000023086	FARSB	99	77.879	Equus_caballus
ENSSDUG00000009685	farsb	100	58.249	ENSEEUG00000007441	FARSB	91	74.468	Erinaceus_europaeus
ENSSDUG00000009685	farsb	97	81.152	ENSELUG00000014767	farsb	99	86.340	Esox_lucius
ENSSDUG00000009685	farsb	100	74.161	ENSFCAG00000026772	FARSB	100	78.209	Felis_catus
ENSSDUG00000009685	farsb	97	71.553	ENSFALG00000006739	FARSB	96	76.274	Ficedula_albicollis
ENSSDUG00000009685	farsb	100	73.906	ENSFDAG00000008871	FARSB	100	77.797	Fukomys_damarensis
ENSSDUG00000009685	farsb	100	88.305	ENSFHEG00000020939	farsb	98	92.593	Fundulus_heteroclitus
ENSSDUG00000009685	farsb	92	80.183	ENSGMOG00000013047	farsb	99	85.714	Gadus_morhua
ENSSDUG00000009685	farsb	100	73.693	ENSGALG00000005236	FARSB	100	77.759	Gallus_gallus
ENSSDUG00000009685	farsb	100	86.158	ENSGAFG00000020900	farsb	98	86.158	Gambusia_affinis
ENSSDUG00000009685	farsb	92	83.670	ENSGACG00000000261	farsb	99	90.353	Gasterosteus_aculeatus
ENSSDUG00000009685	farsb	100	73.782	ENSGAGG00000016575	FARSB	98	78.608	Gopherus_agassizii
ENSSDUG00000009685	farsb	100	90.095	ENSHBUG00000022379	farsb	100	91.341	Haplochromis_burtoni
ENSSDUG00000009685	farsb	100	74.074	ENSHGLG00000015965	FARSB	100	77.797	Heterocephalus_glaber_female
ENSSDUG00000009685	farsb	100	74.074	ENSHGLG00100001035	FARSB	100	77.797	Heterocephalus_glaber_male
ENSSDUG00000009685	farsb	91	81.227	ENSHCOG00000016462	farsb	100	84.328	Hippocampus_comes
ENSSDUG00000009685	farsb	100	79.019	ENSIPUG00000002754	farsb	100	83.531	Ictalurus_punctatus
ENSSDUG00000009685	farsb	100	74.411	ENSSTOG00000016169	FARSB	100	78.136	Ictidomys_tridecemlineatus
ENSSDUG00000009685	farsb	100	74.579	ENSJJAG00000003267	Farsb	100	77.872	Jaculus_jaculus
ENSSDUG00000009685	farsb	100	77.815	ENSKMAG00000005363	farsb	100	83.080	Kryptolebias_marmoratus
ENSSDUG00000009685	farsb	100	90.692	ENSLBEG00000018127	farsb	98	90.692	Labrus_bergylta
ENSSDUG00000009685	farsb	100	76.471	ENSLACG00000002551	FARSB	100	80.985	Latimeria_chalumnae
ENSSDUG00000009685	farsb	100	78.992	ENSLOCG00000004136	farsb	100	84.550	Lepisosteus_oculatus
ENSSDUG00000009685	farsb	100	73.826	ENSLAFG00000015659	FARSB	100	77.027	Loxodonta_africana
ENSSDUG00000009685	farsb	100	73.826	ENSMFAG00000036645	FARSB	100	77.534	Macaca_fascicularis
ENSSDUG00000009685	farsb	100	71.933	ENSMMUG00000007685	FARSB	100	75.000	Macaca_mulatta
ENSSDUG00000009685	farsb	100	73.658	ENSMNEG00000030672	FARSB	100	77.365	Macaca_nemestrina
ENSSDUG00000009685	farsb	100	74.199	ENSMLEG00000042060	FARSB	100	77.703	Mandrillus_leucophaeus
ENSSDUG00000009685	farsb	100	91.548	ENSMAMG00000011835	farsb	98	91.548	Mastacembelus_armatus
ENSSDUG00000009685	farsb	96	85.237	ENSMZEG00005004544	farsb	100	91.327	Maylandia_zebra
ENSSDUG00000009685	farsb	95	72.824	ENSMGAG00000004670	FARSB	100	77.102	Meleagris_gallopavo
ENSSDUG00000009685	farsb	72	78.125	ENSMAUG00000017805	Farsb	100	78.125	Mesocricetus_auratus
ENSSDUG00000009685	farsb	100	74.664	ENSMICG00000002495	FARSB	100	78.378	Microcebus_murinus
ENSSDUG00000009685	farsb	100	75.379	ENSMOCG00000003181	Farsb	100	78.947	Microtus_ochrogaster
ENSSDUG00000009685	farsb	100	80.541	ENSMMOG00000006265	farsb	100	83.701	Mola_mola
ENSSDUG00000009685	farsb	100	74.536	ENSMODG00000021192	FARSB	100	78.438	Monodelphis_domestica
ENSSDUG00000009685	farsb	94	86.847	ENSMALG00000021188	farsb	92	93.103	Monopterus_albus
ENSSDUG00000009685	farsb	100	75.000	MGP_CAROLIEiJ_G0014310	Farsb	100	78.378	Mus_caroli
ENSSDUG00000009685	farsb	100	74.497	ENSMUSG00000026245	Farsb	100	77.872	Mus_musculus
ENSSDUG00000009685	farsb	100	74.664	MGP_PahariEiJ_G0027548	Farsb	100	78.041	Mus_pahari
ENSSDUG00000009685	farsb	100	74.497	MGP_SPRETEiJ_G0015116	Farsb	100	77.872	Mus_spretus
ENSSDUG00000009685	farsb	100	73.993	ENSMPUG00000016677	FARSB	100	77.534	Mustela_putorius_furo
ENSSDUG00000009685	farsb	100	74.664	ENSMLUG00000010904	FARSB	100	78.378	Myotis_lucifugus
ENSSDUG00000009685	farsb	100	73.524	ENSNGAG00000014602	Farsb	100	77.080	Nannospalax_galili
ENSSDUG00000009685	farsb	100	90.215	ENSNBRG00000003198	farsb	100	88.625	Neolamprologus_brichardi
ENSSDUG00000009685	farsb	100	74.161	ENSNLEG00000009638	FARSB	100	77.872	Nomascus_leucogenys
ENSSDUG00000009685	farsb	100	64.370	ENSMEUG00000010798	FARSB	100	68.761	Notamacropus_eugenii
ENSSDUG00000009685	farsb	89	70.000	ENSOPRG00000003292	FARSB	89	70.000	Ochotona_princeps
ENSSDUG00000009685	farsb	100	74.411	ENSODEG00000005451	FARSB	100	78.136	Octodon_degus
ENSSDUG00000009685	farsb	100	89.545	ENSONIG00000014639	farsb	100	95.416	Oreochromis_niloticus
ENSSDUG00000009685	farsb	91	70.686	ENSOANG00000015387	FARSB	99	75.468	Ornithorhynchus_anatinus
ENSSDUG00000009685	farsb	91	75.138	ENSOCUG00000007828	FARSB	94	78.558	Oryctolagus_cuniculus
ENSSDUG00000009685	farsb	100	86.949	ENSORLG00000009135	farsb	100	89.304	Oryzias_latipes
ENSSDUG00000009685	farsb	100	86.678	ENSORLG00015001072	farsb	100	88.580	Oryzias_latipes_hsok
ENSSDUG00000009685	farsb	100	87.119	ENSOMEG00000019009	farsb	100	87.119	Oryzias_melastigma
ENSSDUG00000009685	farsb	100	70.861	ENSOGAG00000010125	FARSB	100	72.213	Otolemur_garnettii
ENSSDUG00000009685	farsb	100	74.329	ENSOARG00000020329	FARSB	100	78.041	Ovis_aries
ENSSDUG00000009685	farsb	100	74.497	ENSPPAG00000039268	FARSB	100	78.209	Pan_paniscus
ENSSDUG00000009685	farsb	100	73.993	ENSPPRG00000010687	FARSB	100	78.041	Panthera_pardus
ENSSDUG00000009685	farsb	100	73.658	ENSPTIG00000004299	FARSB	100	77.703	Panthera_tigris_altaica
ENSSDUG00000009685	farsb	100	74.497	ENSPTRG00000012974	FARSB	100	78.209	Pan_troglodytes
ENSSDUG00000009685	farsb	100	73.993	ENSPANG00000016304	FARSB	100	77.703	Papio_anubis
ENSSDUG00000009685	farsb	100	77.740	ENSPKIG00000006661	farsb	100	82.343	Paramormyrops_kingsleyae
ENSSDUG00000009685	farsb	99	72.758	ENSPSIG00000006248	FARSB	99	77.342	Pelodiscus_sinensis
ENSSDUG00000009685	farsb	83	83.367	ENSPMGG00000002815	farsb	100	90.593	Periophthalmus_magnuspinnatus
ENSSDUG00000009685	farsb	100	74.411	ENSPEMG00000003131	Farsb	100	77.966	Peromyscus_maniculatus_bairdii
ENSSDUG00000009685	farsb	100	73.950	ENSPCIG00000019458	FARSB	100	78.438	Phascolarctos_cinereus
ENSSDUG00000009685	farsb	100	88.186	ENSPLAG00000001104	farsb	98	88.186	Poecilia_latipinna
ENSSDUG00000009685	farsb	100	88.663	ENSPMEG00000017658	farsb	98	88.663	Poecilia_mexicana
ENSSDUG00000009685	farsb	100	88.186	ENSPREG00000010583	farsb	98	88.186	Poecilia_reticulata
ENSSDUG00000009685	farsb	100	74.161	ENSPPYG00000013221	FARSB	100	77.872	Pongo_abelii
ENSSDUG00000009685	farsb	85	65.020	ENSPCAG00000002757	FARSB	85	69.323	Procavia_capensis
ENSSDUG00000009685	farsb	66	88.095	ENSPCOG00000028852	FARSB	100	88.095	Propithecus_coquereli
ENSSDUG00000009685	farsb	100	73.993	ENSPVAG00000006985	FARSB	100	77.534	Pteropus_vampyrus
ENSSDUG00000009685	farsb	100	75.379	ENSPNYG00000011433	farsb	100	81.154	Pundamilia_nyererei
ENSSDUG00000009685	farsb	100	79.526	ENSPNAG00000021802	farsb	100	84.380	Pygocentrus_nattereri
ENSSDUG00000009685	farsb	100	74.329	ENSRNOG00000014119	Farsb	100	77.872	Rattus_norvegicus
ENSSDUG00000009685	farsb	93	73.273	ENSRBIG00000033191	FARSB	98	77.148	Rhinopithecus_bieti
ENSSDUG00000009685	farsb	100	73.993	ENSRROG00000029388	FARSB	100	77.703	Rhinopithecus_roxellana
ENSSDUG00000009685	farsb	100	43.485	YLR060W	FRS1	100	45.574	Saccharomyces_cerevisiae
ENSSDUG00000009685	farsb	100	66.443	ENSSBOG00000019084	FARSB	100	70.101	Saimiri_boliviensis_boliviensis
ENSSDUG00000009685	farsb	92	68.058	ENSSHAG00000015752	FARSB	99	72.578	Sarcophilus_harrisii
ENSSDUG00000009685	farsb	100	77.234	ENSSFOG00015007850	farsb	100	82.003	Scleropages_formosus
ENSSDUG00000009685	farsb	100	92.601	ENSSMAG00000020668	farsb	100	93.718	Scophthalmus_maximus
ENSSDUG00000009685	farsb	100	98.926	ENSSLDG00000025206	farsb	98	98.926	Seriola_lalandi_dorsalis
ENSSDUG00000009685	farsb	50	77.852	ENSSARG00000005655	-	66	77.703	Sorex_araneus
ENSSDUG00000009685	farsb	95	68.850	ENSSPUG00000002245	FARSB	100	73.440	Sphenodon_punctatus
ENSSDUG00000009685	farsb	100	92.601	ENSSPAG00000007367	farsb	98	92.601	Stegastes_partitus
ENSSDUG00000009685	farsb	100	73.064	ENSSSCG00000016226	-	100	76.858	Sus_scrofa
ENSSDUG00000009685	farsb	100	67.677	ENSSSCG00000032016	-	100	71.356	Sus_scrofa
ENSSDUG00000009685	farsb	97	71.379	ENSTGUG00000007788	FARSB	99	75.923	Taeniopygia_guttata
ENSSDUG00000009685	farsb	100	84.487	ENSTRUG00000009483	farsb	98	84.487	Takifugu_rubripes
ENSSDUG00000009685	farsb	100	82.017	ENSTNIG00000014310	farsb	100	87.436	Tetraodon_nigroviridis
ENSSDUG00000009685	farsb	89	64.854	ENSTBEG00000003136	FARSB	89	64.854	Tupaia_belangeri
ENSSDUG00000009685	farsb	88	78.109	ENSTTRG00000009082	FARSB	88	78.109	Tursiops_truncatus
ENSSDUG00000009685	farsb	85	69.034	ENSUAMG00000024613	FARSB	99	73.360	Ursus_americanus
ENSSDUG00000009685	farsb	100	73.993	ENSUMAG00000017995	FARSB	100	77.703	Ursus_maritimus
ENSSDUG00000009685	farsb	92	70.492	ENSVPAG00000006844	FARSB	100	74.632	Vicugna_pacos
ENSSDUG00000009685	farsb	100	74.324	ENSVVUG00000024025	FARSB	100	77.966	Vulpes_vulpes
ENSSDUG00000009685	farsb	100	72.529	ENSXETG00000002934	farsb	100	77.534	Xenopus_tropicalis
ENSSDUG00000009685	farsb	100	87.112	ENSXMAG00000008280	farsb	98	87.112	Xiphophorus_maculatus