EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000009713 (Gene tree)
Gene ID: 111236049
Gene Symbol: ddx61
Alias: fk48d07|p54b|si:ch211-175g6.7|wu:fk48d07
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4532 bases
Position: chrBDQW01000551.1:443329-447860
Accession: 111236049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000013382	DEAD	PF00270.29	1.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000013627	-	1464	XM_022764653	ENSSDUP00000013382	487 (aa)	XP_022620374	UPI000BBF193F

Gene Model

Click here to download ENSSDUG00000009713's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000009713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000009713	ddx61	69	43.333	ENSSDUG00000012334	ddx1	58	43.333
ENSSDUG00000009713	ddx61	71	32.394	ENSSDUG00000020120	ddx43	53	31.948
ENSSDUG00000009713	ddx61	74	33.333	ENSSDUG00000018110	ddx47	69	33.333
ENSSDUG00000009713	ddx61	99	86.749	ENSSDUG00000007530	-	96	88.298
ENSSDUG00000009713	ddx61	77	37.831	ENSSDUG00000021512	eif4a3	92	37.831
ENSSDUG00000009713	ddx61	76	31.152	ENSSDUG00000019456	DDX5	59	31.152
ENSSDUG00000009713	ddx61	76	31.750	ENSSDUG00000004279	-	63	31.443
ENSSDUG00000009713	ddx61	96	81.723	ENSSDUG00000019695	ddx6	98	81.723
ENSSDUG00000009713	ddx61	76	39.247	ENSSDUG00000004913	eif4a1b	92	39.247
ENSSDUG00000009713	ddx61	75	32.888	ENSSDUG00000009696	ddx49	76	32.888
ENSSDUG00000009713	ddx61	71	30.704	ENSSDUG00000007138	kif14	55	30.704
ENSSDUG00000009713	ddx61	76	39.516	ENSSDUG00000010103	eif4a2	90	39.516
ENSSDUG00000009713	ddx61	72	36.538	ENSSDUG00000000334	ddx19	77	36.339
ENSSDUG00000009713	ddx61	69	34.870	ENSSDUG00000009075	DDX39A	99	34.870
ENSSDUG00000009713	ddx61	78	35.751	ENSSDUG00000011557	ddx39b	89	35.751
ENSSDUG00000009713	ddx61	71	30.601	ENSSDUG00000022015	ddx4	57	30.601
ENSSDUG00000009713	ddx61	73	36.856	ENSSDUG00000003930	zgc:193690	80	36.856
ENSSDUG00000009713	ddx61	72	32.778	ENSSDUG00000016136	-	72	32.778
ENSSDUG00000009713	ddx61	76	31.920	ENSSDUG00000013166	-	60	31.340
ENSSDUG00000009713	ddx61	74	31.989	ENSSDUG00000020428	-	56	31.989
ENSSDUG00000009713	ddx61	81	35.176	ENSSDUG00000020224	ddx39aa	93	35.176
ENSSDUG00000009713	ddx61	79	34.925	ENSSDUG00000015980	ddx20	52	34.925
ENSSDUG00000009713	ddx61	74	30.189	ENSSDUG00000004022	ddx52	56	30.189
ENSSDUG00000009713	ddx61	72	30.278	ENSSDUG00000018855	ddx27	50	30.278
ENSSDUG00000009713	ddx61	77	31.517	ENSSDUG00000022459	ddx23	58	31.517
ENSSDUG00000009713	ddx61	68	32.865	ENSSDUG00000023568	ddx55	59	32.865

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000009713	ddx61	75	92.643	ENSAPOG00000023627	-	90	94.915	Acanthochromis_polyacanthus
ENSSDUG00000009713	ddx61	100	91.189	ENSAPOG00000014829	ddx61	100	91.189	Acanthochromis_polyacanthus
ENSSDUG00000009713	ddx61	99	79.918	ENSACIG00000018355	-	96	82.090	Amphilophus_citrinellus
ENSSDUG00000009713	ddx61	100	93.033	ENSAOCG00000007627	ddx61	100	93.033	Amphiprion_ocellaris
ENSSDUG00000009713	ddx61	99	87.137	ENSAOCG00000006269	-	96	88.699	Amphiprion_ocellaris
ENSSDUG00000009713	ddx61	99	87.137	ENSAPEG00000020642	-	96	88.699	Amphiprion_percula
ENSSDUG00000009713	ddx61	99	87.137	ENSAPEG00000021368	-	96	88.699	Amphiprion_percula
ENSSDUG00000009713	ddx61	100	93.033	ENSAPEG00000007293	ddx61	100	93.033	Amphiprion_percula
ENSSDUG00000009713	ddx61	100	92.402	ENSATEG00000011302	ddx61	100	91.992	Anabas_testudineus
ENSSDUG00000009713	ddx61	99	86.515	ENSATEG00000005424	-	96	88.060	Anabas_testudineus
ENSSDUG00000009713	ddx61	99	86.680	ENSACLG00000003260	-	96	89.126	Astatotilapia_calliptera
ENSSDUG00000009713	ddx61	98	92.227	ENSACLG00000027620	ddx61	98	93.177	Astatotilapia_calliptera
ENSSDUG00000009713	ddx61	99	84.016	ENSAMXG00000033980	-	95	86.200	Astyanax_mexicanus
ENSSDUG00000009713	ddx61	97	85.714	ENSAMXG00000032542	ddx61	96	86.017	Astyanax_mexicanus
ENSSDUG00000009713	ddx61	97	88.584	ENSCSEG00000009893	-	96	89.126	Cynoglossus_semilaevis
ENSSDUG00000009713	ddx61	97	88.136	ENSCVAG00000011006	-	96	88.675	Cyprinodon_variegatus
ENSSDUG00000009713	ddx61	97	86.013	ENSDARG00000018425	ddx61	97	86.681	Danio_rerio
ENSSDUG00000009713	ddx61	98	87.164	ENSELUG00000022538	-	96	88.211	Esox_lucius
ENSSDUG00000009713	ddx61	100	89.139	ENSELUG00000020545	ddx61	100	89.139	Esox_lucius
ENSSDUG00000009713	ddx61	99	87.526	ENSFHEG00000015487	-	96	89.103	Fundulus_heteroclitus
ENSSDUG00000009713	ddx61	97	89.076	ENSGMOG00000013762	ddx61	98	89.241	Gadus_morhua
ENSSDUG00000009713	ddx61	66	82.779	ENSGMOG00000003561	-	100	83.686	Gadus_morhua
ENSSDUG00000009713	ddx61	97	87.657	ENSGAFG00000015865	-	95	88.675	Gambusia_affinis
ENSSDUG00000009713	ddx61	99	86.957	ENSGACG00000002413	-	97	88.511	Gasterosteus_aculeatus
ENSSDUG00000009713	ddx61	97	89.712	ENSGACG00000003401	ddx61	98	90.000	Gasterosteus_aculeatus
ENSSDUG00000009713	ddx61	98	92.437	ENSHBUG00000017832	ddx61	98	93.390	Haplochromis_burtoni
ENSSDUG00000009713	ddx61	99	86.680	ENSHBUG00000017033	-	96	89.126	Haplochromis_burtoni
ENSSDUG00000009713	ddx61	97	86.258	ENSHCOG00000012238	-	96	86.780	Hippocampus_comes
ENSSDUG00000009713	ddx61	100	87.474	ENSHCOG00000008184	ddx61	96	89.316	Hippocampus_comes
ENSSDUG00000009713	ddx61	96	84.648	ENSIPUG00000012823	DDX6	97	84.829	Ictalurus_punctatus
ENSSDUG00000009713	ddx61	97	84.937	ENSIPUG00000008367	-	97	86.200	Ictalurus_punctatus
ENSSDUG00000009713	ddx61	96	87.633	ENSKMAG00000007213	-	96	87.633	Kryptolebias_marmoratus
ENSSDUG00000009713	ddx61	99	90.741	ENSLBEG00000001740	ddx61	99	90.535	Labrus_bergylta
ENSSDUG00000009713	ddx61	99	87.117	ENSLBEG00000016890	-	96	88.655	Labrus_bergylta
ENSSDUG00000009713	ddx61	98	82.158	ENSLACG00000015214	ddx61	98	83.333	Latimeria_chalumnae
ENSSDUG00000009713	ddx61	75	78.125	ENSLOCG00000004352	ddx61	94	47.009	Lepisosteus_oculatus
ENSSDUG00000009713	ddx61	100	91.803	ENSMAMG00000005321	ddx61	100	91.803	Mastacembelus_armatus
ENSSDUG00000009713	ddx61	99	86.957	ENSMAMG00000005559	-	96	88.511	Mastacembelus_armatus
ENSSDUG00000009713	ddx61	98	92.437	ENSMZEG00005003556	ddx61	98	93.390	Maylandia_zebra
ENSSDUG00000009713	ddx61	99	86.680	ENSMZEG00005026268	-	96	89.126	Maylandia_zebra
ENSSDUG00000009713	ddx61	97	91.507	ENSMMOG00000007415	ddx61	97	91.471	Mola_mola
ENSSDUG00000009713	ddx61	99	77.801	ENSMMOG00000013694	-	95	79.104	Mola_mola
ENSSDUG00000009713	ddx61	72	76.204	ENSMMOG00000008825	-	99	71.105	Mola_mola
ENSSDUG00000009713	ddx61	99	86.100	ENSMALG00000013817	-	96	87.660	Monopterus_albus
ENSSDUG00000009713	ddx61	100	78.659	ENSMALG00000013776	ddx61	98	78.659	Monopterus_albus
ENSSDUG00000009713	ddx61	99	79.918	ENSNBRG00000015075	-	96	82.090	Neolamprologus_brichardi
ENSSDUG00000009713	ddx61	97	86.469	ENSNBRG00000015800	ddx61	98	86.780	Neolamprologus_brichardi
ENSSDUG00000009713	ddx61	99	86.885	ENSONIG00000013748	-	96	89.339	Oreochromis_niloticus
ENSSDUG00000009713	ddx61	97	92.812	ENSONIG00000011418	ddx61	98	93.177	Oreochromis_niloticus
ENSSDUG00000009713	ddx61	98	86.792	ENSORLG00000009178	-	96	87.846	Oryzias_latipes
ENSSDUG00000009713	ddx61	98	86.792	ENSORLG00020015515	-	96	87.846	Oryzias_latipes_hni
ENSSDUG00000009713	ddx61	98	86.792	ENSORLG00015006764	-	96	87.846	Oryzias_latipes_hsok
ENSSDUG00000009713	ddx61	97	77.895	ENSOMEG00000022326	-	98	78.678	Oryzias_melastigma
ENSSDUG00000009713	ddx61	97	88.260	ENSPKIG00000024264	ddx61	99	86.531	Paramormyrops_kingsleyae
ENSSDUG00000009713	ddx61	99	80.372	ENSPMGG00000013355	-	96	82.090	Periophthalmus_magnuspinnatus
ENSSDUG00000009713	ddx61	99	87.526	ENSPFOG00000005750	-	96	88.889	Poecilia_formosa
ENSSDUG00000009713	ddx61	99	87.526	ENSPLAG00000000403	-	96	88.889	Poecilia_latipinna
ENSSDUG00000009713	ddx61	98	87.815	ENSPMEG00000023737	-	96	88.889	Poecilia_mexicana
ENSSDUG00000009713	ddx61	99	86.680	ENSPNYG00000003986	-	96	89.126	Pundamilia_nyererei
ENSSDUG00000009713	ddx61	98	85.770	ENSPNYG00000015045	ddx61	98	86.561	Pundamilia_nyererei
ENSSDUG00000009713	ddx61	98	84.167	ENSPNAG00000024072	ddx61	97	85.563	Pygocentrus_nattereri
ENSSDUG00000009713	ddx61	97	86.345	ENSPNAG00000008742	-	96	86.892	Pygocentrus_nattereri
ENSSDUG00000009713	ddx61	96	87.368	ENSSFOG00015021404	ddx61	96	87.738	Scleropages_formosus
ENSSDUG00000009713	ddx61	100	92.418	ENSSMAG00000006591	ddx61	100	92.418	Scophthalmus_maximus
ENSSDUG00000009713	ddx61	99	86.515	ENSSMAG00000001793	-	96	88.060	Scophthalmus_maximus
ENSSDUG00000009713	ddx61	99	86.749	ENSSLDG00000007608	-	96	88.298	Seriola_lalandi_dorsalis
ENSSDUG00000009713	ddx61	100	99.590	ENSSLDG00000000132	ddx61	100	99.590	Seriola_lalandi_dorsalis
ENSSDUG00000009713	ddx61	100	92.418	ENSSPAG00000001578	ddx61	100	92.418	Stegastes_partitus
ENSSDUG00000009713	ddx61	99	86.929	ENSSPAG00000013878	-	96	88.486	Stegastes_partitus
ENSSDUG00000009713	ddx61	97	87.526	ENSTRUG00000012432	-	96	88.248	Takifugu_rubripes
ENSSDUG00000009713	ddx61	96	88.323	ENSTNIG00000003560	-	98	88.486	Tetraodon_nigroviridis
ENSSDUG00000009713	ddx61	97	78.243	ENSXCOG00000001406	-	95	79.060	Xiphophorus_couchianus
ENSSDUG00000009713	ddx61	97	87.866	ENSXMAG00000016090	-	95	88.889	Xiphophorus_maculatus