EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000009775 (Gene tree)
Gene ID: 111235775
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 6854 bases
Position: chrBDQW01000533.1:573380-580233
Accession: 111235775
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000013448	Sua5_yciO_yrdC	PF01300.18	4e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000013693	-	4702	XM_022764315	ENSSDUP00000013448	266 (aa)	XP_022620036	UPI000BBEB4D0

Gene Model

Click here to download ENSSDUG00000009775's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000009775's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000009775	yrdc	53	36.667	ENSSDUG00000006736	-	77	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000009775	yrdc	98	53.409	ENSG00000196449	YRDC	94	53.409	Homo_sapiens
ENSSDUG00000009775	yrdc	100	86.090	ENSAPOG00000024293	yrdc	99	86.090	Acanthochromis_polyacanthus
ENSSDUG00000009775	yrdc	67	64.481	ENSAMEG00000001173	YRDC	97	64.481	Ailuropoda_melanoleuca
ENSSDUG00000009775	yrdc	100	84.962	ENSACIG00000017330	yrdc	99	84.962	Amphilophus_citrinellus
ENSSDUG00000009775	yrdc	100	86.842	ENSAOCG00000021647	yrdc	99	86.842	Amphiprion_ocellaris
ENSSDUG00000009775	yrdc	100	86.466	ENSAPEG00000006164	yrdc	99	86.466	Amphiprion_percula
ENSSDUG00000009775	yrdc	98	85.057	ENSATEG00000010086	yrdc	98	85.057	Anabas_testudineus
ENSSDUG00000009775	yrdc	71	61.340	ENSACAG00000017203	YRDC	99	58.491	Anolis_carolinensis
ENSSDUG00000009775	yrdc	75	58.738	ENSANAG00000031052	-	75	58.738	Aotus_nancymaae
ENSSDUG00000009775	yrdc	81	58.904	ENSANAG00000028788	-	93	58.904	Aotus_nancymaae
ENSSDUG00000009775	yrdc	100	85.019	ENSACLG00000027775	yrdc	99	85.019	Astatotilapia_calliptera
ENSSDUG00000009775	yrdc	88	76.068	ENSAMXG00000037791	yrdc	89	76.068	Astyanax_mexicanus
ENSSDUG00000009775	yrdc	98	54.545	ENSBTAG00000006510	YRDC	95	54.545	Bos_taurus
ENSSDUG00000009775	yrdc	77	36.697	WBGene00012997	Y48C3A.18	99	36.697	Caenorhabditis_elegans
ENSSDUG00000009775	yrdc	98	52.652	ENSCJAG00000002078	YRDC	72	52.652	Callithrix_jacchus
ENSSDUG00000009775	yrdc	77	61.244	ENSCAFG00000003253	YRDC	76	61.244	Canis_familiaris
ENSSDUG00000009775	yrdc	77	62.201	ENSCAFG00020007843	YRDC	77	61.905	Canis_lupus_dingo
ENSSDUG00000009775	yrdc	77	62.381	ENSCHIG00000007882	YRDC	76	62.381	Capra_hircus
ENSSDUG00000009775	yrdc	62	64.706	ENSTSYG00000005555	YRDC	61	64.706	Carlito_syrichta
ENSSDUG00000009775	yrdc	94	56.693	ENSCPOG00000036144	YRDC	90	56.693	Cavia_porcellus
ENSSDUG00000009775	yrdc	98	52.273	ENSCCAG00000028891	YRDC	94	52.273	Cebus_capucinus
ENSSDUG00000009775	yrdc	98	51.515	ENSCATG00000036928	YRDC	94	52.652	Cercocebus_atys
ENSSDUG00000009775	yrdc	73	65.990	ENSCLAG00000015012	YRDC	83	59.402	Chinchilla_lanigera
ENSSDUG00000009775	yrdc	98	51.515	ENSCSAG00000001116	YRDC	94	52.652	Chlorocebus_sabaeus
ENSSDUG00000009775	yrdc	53	65.000	ENSCHOG00000005500	YRDC	67	65.000	Choloepus_hoffmanni
ENSSDUG00000009775	yrdc	78	64.929	ENSCPBG00000018446	YRDC	90	64.929	Chrysemys_picta_bellii
ENSSDUG00000009775	yrdc	75	49.765	ENSCING00000007564	-	98	48.571	Ciona_intestinalis
ENSSDUG00000009775	yrdc	75	48.341	ENSCSAVG00000009982	-	98	46.411	Ciona_savignyi
ENSSDUG00000009775	yrdc	98	52.273	ENSCANG00000031111	YRDC	94	53.409	Colobus_angolensis_palliatus
ENSSDUG00000009775	yrdc	84	59.649	ENSCGRG00001014496	-	81	59.389	Cricetulus_griseus_chok1gshd
ENSSDUG00000009775	yrdc	84	54.386	ENSCGRG00001000829	-	63	53.913	Cricetulus_griseus_chok1gshd
ENSSDUG00000009775	yrdc	93	69.767	ENSCSEG00000019075	yrdc	95	69.767	Cynoglossus_semilaevis
ENSSDUG00000009775	yrdc	96	75.781	ENSCVAG00000017355	yrdc	96	75.781	Cyprinodon_variegatus
ENSSDUG00000009775	yrdc	88	73.077	ENSDARG00000041428	yrdc	98	73.077	Danio_rerio
ENSSDUG00000009775	yrdc	71	47.423	ENSDNOG00000036198	-	94	47.423	Dasypus_novemcinctus
ENSSDUG00000009775	yrdc	92	55.020	ENSDNOG00000038789	-	90	54.506	Dasypus_novemcinctus
ENSSDUG00000009775	yrdc	72	63.590	ENSDORG00000008788	Yrdc	86	63.590	Dipodomys_ordii
ENSSDUG00000009775	yrdc	75	48.780	FBgn0061361	CG33786	82	48.780	Drosophila_melanogaster
ENSSDUG00000009775	yrdc	94	43.701	ENSETEG00000003442	YRDC	90	43.701	Echinops_telfairi
ENSSDUG00000009775	yrdc	88	49.793	ENSEBUG00000014080	yrdc	99	49.793	Eptatretus_burgeri
ENSSDUG00000009775	yrdc	94	55.686	ENSEASG00005012253	YRDC	75	62.559	Equus_asinus_asinus
ENSSDUG00000009775	yrdc	94	55.294	ENSECAG00000022522	YRDC	75	62.559	Equus_caballus
ENSSDUG00000009775	yrdc	95	73.643	ENSELUG00000018071	yrdc	85	73.643	Esox_lucius
ENSSDUG00000009775	yrdc	86	57.082	ENSFCAG00000011018	YRDC	83	56.838	Felis_catus
ENSSDUG00000009775	yrdc	71	67.358	ENSFALG00000000964	YRDC	89	66.837	Ficedula_albicollis
ENSSDUG00000009775	yrdc	69	32.143	ENSFALG00000011333	-	51	32.143	Ficedula_albicollis
ENSSDUG00000009775	yrdc	97	76.834	ENSFHEG00000001029	yrdc	96	76.569	Fundulus_heteroclitus
ENSSDUG00000009775	yrdc	77	80.488	ENSGMOG00000015635	yrdc	99	80.488	Gadus_morhua
ENSSDUG00000009775	yrdc	77	65.385	ENSGALG00000029001	YRDC	82	65.385	Gallus_gallus
ENSSDUG00000009775	yrdc	73	31.250	ENSGALG00000025899	-	69	31.250	Gallus_gallus
ENSSDUG00000009775	yrdc	99	78.788	ENSGAFG00000008396	yrdc	99	78.788	Gambusia_affinis
ENSSDUG00000009775	yrdc	88	81.857	ENSGACG00000013878	yrdc	98	81.013	Gasterosteus_aculeatus
ENSSDUG00000009775	yrdc	83	62.832	ENSGAGG00000014968	YRDC	98	62.832	Gopherus_agassizii
ENSSDUG00000009775	yrdc	98	53.409	ENSGGOG00000007619	YRDC	94	53.409	Gorilla_gorilla
ENSSDUG00000009775	yrdc	100	85.393	ENSHBUG00000009298	yrdc	99	85.393	Haplochromis_burtoni
ENSSDUG00000009775	yrdc	87	58.723	ENSHGLG00000014075	YRDC	83	58.974	Heterocephalus_glaber_female
ENSSDUG00000009775	yrdc	77	63.462	ENSHGLG00100002734	YRDC	75	63.768	Heterocephalus_glaber_male
ENSSDUG00000009775	yrdc	99	66.160	ENSHCOG00000006598	yrdc	99	66.160	Hippocampus_comes
ENSSDUG00000009775	yrdc	89	77.119	ENSIPUG00000014985	yrdc	98	77.119	Ictalurus_punctatus
ENSSDUG00000009775	yrdc	95	55.985	ENSSTOG00000001643	YRDC	93	55.985	Ictidomys_tridecemlineatus
ENSSDUG00000009775	yrdc	95	81.746	ENSKMAG00000013468	yrdc	94	81.746	Kryptolebias_marmoratus
ENSSDUG00000009775	yrdc	100	85.714	ENSLBEG00000027501	yrdc	99	85.714	Labrus_bergylta
ENSSDUG00000009775	yrdc	77	68.269	ENSLACG00000010689	YRDC	95	68.116	Latimeria_chalumnae
ENSSDUG00000009775	yrdc	76	33.953	ENSLACG00000017624	si:ch211-153b23.3	65	33.953	Latimeria_chalumnae
ENSSDUG00000009775	yrdc	87	69.492	ENSLOCG00000003321	yrdc	97	69.492	Lepisosteus_oculatus
ENSSDUG00000009775	yrdc	75	63.235	ENSLAFG00000017556	YRDC	73	63.235	Loxodonta_africana
ENSSDUG00000009775	yrdc	75	61.275	ENSMFAG00000003487	YRDC	96	62.745	Macaca_fascicularis
ENSSDUG00000009775	yrdc	98	51.515	ENSMMUG00000005372	YRDC	70	52.652	Macaca_mulatta
ENSSDUG00000009775	yrdc	98	51.515	ENSMNEG00000029348	YRDC	94	52.652	Macaca_nemestrina
ENSSDUG00000009775	yrdc	52	62.937	ENSMLEG00000041122	YRDC	87	66.667	Mandrillus_leucophaeus
ENSSDUG00000009775	yrdc	98	84.030	ENSMAMG00000007315	yrdc	98	84.030	Mastacembelus_armatus
ENSSDUG00000009775	yrdc	100	85.019	ENSMZEG00005006948	yrdc	99	85.019	Maylandia_zebra
ENSSDUG00000009775	yrdc	73	32.212	ENSMGAG00000005489	-	55	32.212	Meleagris_gallopavo
ENSSDUG00000009775	yrdc	74	66.832	ENSMGAG00000002833	YRDC	99	66.832	Meleagris_gallopavo
ENSSDUG00000009775	yrdc	86	59.657	ENSMICG00000031688	YRDC	84	59.149	Microcebus_murinus
ENSSDUG00000009775	yrdc	70	52.688	ENSMOCG00000000164	-	64	56.024	Microtus_ochrogaster
ENSSDUG00000009775	yrdc	100	82.707	ENSMMOG00000002119	yrdc	99	82.707	Mola_mola
ENSSDUG00000009775	yrdc	76	63.415	ENSMODG00000017750	YRDC	73	63.415	Monodelphis_domestica
ENSSDUG00000009775	yrdc	98	83.846	ENSMALG00000012471	yrdc	98	83.846	Monopterus_albus
ENSSDUG00000009775	yrdc	79	59.624	MGP_CAROLIEiJ_G0026453	Yrdc	97	68.627	Mus_caroli
ENSSDUG00000009775	yrdc	87	57.872	ENSMUSG00000028889	Yrdc	100	68.571	Mus_musculus
ENSSDUG00000009775	yrdc	87	58.723	MGP_PahariEiJ_G0028784	Yrdc	100	68.571	Mus_pahari
ENSSDUG00000009775	yrdc	87	57.872	MGP_SPRETEiJ_G0027432	Yrdc	83	57.872	Mus_spretus
ENSSDUG00000009775	yrdc	74	62.871	ENSMPUG00000014542	YRDC	81	62.871	Mustela_putorius_furo
ENSSDUG00000009775	yrdc	75	53.922	ENSMLUG00000028796	-	73	53.922	Myotis_lucifugus
ENSSDUG00000009775	yrdc	94	55.686	ENSMLUG00000000955	-	73	64.216	Myotis_lucifugus
ENSSDUG00000009775	yrdc	73	60.406	ENSMLUG00000024310	-	97	60.406	Myotis_lucifugus
ENSSDUG00000009775	yrdc	78	63.033	ENSNGAG00000019099	Yrdc	75	63.033	Nannospalax_galili
ENSSDUG00000009775	yrdc	99	84.962	ENSNBRG00000009475	yrdc	100	84.962	Neolamprologus_brichardi
ENSSDUG00000009775	yrdc	98	53.409	ENSNLEG00000011665	YRDC	94	53.409	Nomascus_leucogenys
ENSSDUG00000009775	yrdc	77	63.033	ENSMEUG00000005068	YRDC	98	63.033	Notamacropus_eugenii
ENSSDUG00000009775	yrdc	94	56.693	ENSODEG00000007401	YRDC	100	68.571	Octodon_degus
ENSSDUG00000009775	yrdc	89	88.186	ENSONIG00000016213	yrdc	99	88.186	Oreochromis_niloticus
ENSSDUG00000009775	yrdc	95	55.253	ENSOCUG00000005384	YRDC	79	58.974	Oryctolagus_cuniculus
ENSSDUG00000009775	yrdc	100	76.952	ENSORLG00000014393	yrdc	99	76.952	Oryzias_latipes
ENSSDUG00000009775	yrdc	100	77.154	ENSORLG00020019663	yrdc	99	77.154	Oryzias_latipes_hni
ENSSDUG00000009775	yrdc	100	76.404	ENSORLG00015004625	yrdc	99	76.404	Oryzias_latipes_hsok
ENSSDUG00000009775	yrdc	100	78.571	ENSOMEG00000018550	yrdc	99	78.571	Oryzias_melastigma
ENSSDUG00000009775	yrdc	92	53.962	ENSOGAG00000030474	YRDC	96	53.962	Otolemur_garnettii
ENSSDUG00000009775	yrdc	77	62.381	ENSOARG00000019873	YRDC	75	62.381	Ovis_aries
ENSSDUG00000009775	yrdc	52	66.667	ENSPPAG00000039722	-	89	68.182	Pan_paniscus
ENSSDUG00000009775	yrdc	86	57.082	ENSPPRG00000007752	YRDC	83	56.838	Panthera_pardus
ENSSDUG00000009775	yrdc	57	60.897	ENSPTIG00000019821	YRDC	59	64.964	Panthera_tigris_altaica
ENSSDUG00000009775	yrdc	98	53.409	ENSPTRG00000000557	YRDC	94	53.409	Pan_troglodytes
ENSSDUG00000009775	yrdc	98	51.515	ENSPANG00000006487	YRDC	71	52.652	Papio_anubis
ENSSDUG00000009775	yrdc	97	69.231	ENSPKIG00000004574	yrdc	94	69.231	Paramormyrops_kingsleyae
ENSSDUG00000009775	yrdc	83	62.054	ENSPSIG00000006483	YRDC	76	62.054	Pelodiscus_sinensis
ENSSDUG00000009775	yrdc	98	74.427	ENSPMGG00000004184	yrdc	95	78.279	Periophthalmus_magnuspinnatus
ENSSDUG00000009775	yrdc	65	62.712	ENSPEMG00000016985	Yrdc	77	62.712	Peromyscus_maniculatus_bairdii
ENSSDUG00000009775	yrdc	65	57.062	ENSPMAG00000002905	yrdc	96	57.062	Petromyzon_marinus
ENSSDUG00000009775	yrdc	76	62.439	ENSPCIG00000025731	YRDC	73	62.439	Phascolarctos_cinereus
ENSSDUG00000009775	yrdc	99	78.409	ENSPFOG00000023097	yrdc	99	78.409	Poecilia_formosa
ENSSDUG00000009775	yrdc	99	78.409	ENSPLAG00000020882	yrdc	99	78.409	Poecilia_latipinna
ENSSDUG00000009775	yrdc	99	78.409	ENSPMEG00000013237	yrdc	99	78.409	Poecilia_mexicana
ENSSDUG00000009775	yrdc	99	78.788	ENSPREG00000005285	yrdc	99	78.788	Poecilia_reticulata
ENSSDUG00000009775	yrdc	84	59.211	ENSPPYG00000001523	-	93	59.471	Pongo_abelii
ENSSDUG00000009775	yrdc	86	58.547	ENSPCAG00000016850	YRDC	83	58.547	Procavia_capensis
ENSSDUG00000009775	yrdc	100	53.704	ENSPCOG00000013214	YRDC	84	59.149	Propithecus_coquereli
ENSSDUG00000009775	yrdc	75	63.725	ENSPVAG00000010147	YRDC	73	63.725	Pteropus_vampyrus
ENSSDUG00000009775	yrdc	100	85.019	ENSPNYG00000013956	yrdc	99	85.019	Pundamilia_nyererei
ENSSDUG00000009775	yrdc	86	72.926	ENSPNAG00000015625	yrdc	89	75.814	Pygocentrus_nattereri
ENSSDUG00000009775	yrdc	86	57.940	ENSRNOG00000025424	Yrdc	83	57.447	Rattus_norvegicus
ENSSDUG00000009775	yrdc	98	52.273	ENSRBIG00000032289	YRDC	94	53.030	Rhinopithecus_bieti
ENSSDUG00000009775	yrdc	82	57.018	ENSRROG00000039370	YRDC	78	58.333	Rhinopithecus_roxellana
ENSSDUG00000009775	yrdc	73	62.944	ENSSBOG00000018937	YRDC	84	62.944	Saimiri_boliviensis_boliviensis
ENSSDUG00000009775	yrdc	53	65.278	ENSSHAG00000013957	-	90	67.669	Sarcophilus_harrisii
ENSSDUG00000009775	yrdc	81	71.233	ENSSFOG00015006128	yrdc	94	71.233	Scleropages_formosus
ENSSDUG00000009775	yrdc	89	88.655	ENSSMAG00000005195	yrdc	100	85.714	Scophthalmus_maximus
ENSSDUG00000009775	yrdc	100	99.624	ENSSLDG00000003196	yrdc	100	99.624	Seriola_lalandi_dorsalis
ENSSDUG00000009775	yrdc	76	66.341	ENSSPUG00000003946	YRDC	84	63.134	Sphenodon_punctatus
ENSSDUG00000009775	yrdc	100	83.459	ENSSPAG00000012559	yrdc	99	83.459	Stegastes_partitus
ENSSDUG00000009775	yrdc	92	56.225	ENSSSCG00000040425	YRDC	88	56.225	Sus_scrofa
ENSSDUG00000009775	yrdc	53	68.493	ENSTGUG00000001507	YRDC	93	70.073	Taeniopygia_guttata
ENSSDUG00000009775	yrdc	95	73.152	ENSTRUG00000005923	yrdc	95	73.152	Takifugu_rubripes
ENSSDUG00000009775	yrdc	56	62.987	ENSTBEG00000008863	YRDC	96	64.000	Tupaia_belangeri
ENSSDUG00000009775	yrdc	52	67.376	ENSTTRG00000013538	-	89	68.939	Tursiops_truncatus
ENSSDUG00000009775	yrdc	73	64.322	ENSUAMG00000006150	YRDC	98	64.322	Ursus_americanus
ENSSDUG00000009775	yrdc	75	51.471	ENSVPAG00000006642	YRDC	87	51.471	Vicugna_pacos
ENSSDUG00000009775	yrdc	87	61.826	ENSXETG00000014420	yrdc	99	61.826	Xenopus_tropicalis
ENSSDUG00000009775	yrdc	88	81.702	ENSXCOG00000000829	yrdc	99	81.702	Xiphophorus_couchianus
ENSSDUG00000009775	yrdc	99	78.788	ENSXMAG00000014606	yrdc	94	78.788	Xiphophorus_maculatus